نتائج البحث - "Gene Transfer, Horizontal."

1

Phenotypic and genomic hallmarks of a novel, potentially pathogenic rapidly growing Mycobacterium species related to the Mycobacterium fortuitum complex

المؤلفون: Roland Brosch, Reem Gharbi, Besma Mhenni, Varun Khanna, Wafa Frigui, Helmi Mardassi

المساهمون: Laboratoire de Microbiologie Moléculaire, Vaccinologie et Développement Biotechnologique (LR11IPT01), Institut Pasteur de Tunis, Réseau International des Instituts Pasteur (RIIP)-Réseau International des Instituts Pasteur (RIIP), Université de Tunis El Manar (UTM), Hub Bioinformatique et Biostatistique - Bioinformatics and Biostatistics HUB, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Pathogénomique mycobactérienne intégrée - Integrated Mycobacterial Pathogenomics, This study was funded by the Tunisian Ministry of Higher Education and Scientific Research (LR16IPT01)., We thank Christiane Bouchier and Laurence Ma, from the Biomics platform of the Institut Pasteur, Paris, for library construction and genome sequencing, and Sinda Zarouk from Institut Pasteur, Tunis, for sample logistics.

المصدر: Scientific Reports
Scientific Reports, 2021, 11 (1), pp.13011. ⟨10.1038/s41598-021-91737-8⟩
Scientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)

مصطلحات موضوعية: 0301 basic medicine, MESH: Mycobacterium fortuitum, Gene Transfer, Horizontal, Virulence Factors, Science, [SDV]Life Sciences [q-bio], 030106 microbiology, Mycobacterium Infections, Nontuberculous, Virulence, Locus (genetics), Human pathogen, MESH: Molecular Sequence Annotation, Biology, MESH: Genome, Bacterial, MESH: Phenotype, Microbiology, Article, 03 medical and health sciences, Genetics, Humans, MESH: Phylogeny, Gene, Phylogeny, MESH: Virulence Factors, Whole genome sequencing, Multidisciplinary, MESH: Humans, Mycobacterium fortuitum, MESH: Genomics, Computational Biology, Molecular Sequence Annotation, Genomics, MESH: Mycobacterium Infections, Nontuberculous, Phenotype, Mycobacterium fortuitum Complex, MESH: Gene Transfer, Horizontal, 030104 developmental biology, Horizontal gene transfer, Medicine, Genome, Bacterial, MESH: Computational Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::31113678b51dfc80c8075b5271d6664d
https://hal-riip.archives-ouvertes.fr/pasteur-03547033/file/had4.pdf

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2

The genome of pest Rhynchophorus ferrugineus reveals gene families important at the plant-beetle interface

المؤلفون: Claude Desplan, Biduth Kundu, Naganeeswaran Sudalaimuthuasari, Khaled M. A. Amiri, Khaled M. Hazzouri, David R. Nelson, Johnston J. Spencer, Mohammad Ali Al-Deeb, Alain Le Mansour

المصدر: Communications Biology, Vol 3, Iss 1, Pp 1-14 (2020)
Communications Biology

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Male, Gene Transfer, Horizontal, Genome, Insect, Medicine (miscellaneous), Sequence assembly, Genomics, Evolutionary ecology, Receptors, Odorant, 010603 evolutionary biology, 01 natural sciences, Genome, Synteny, General Biochemistry, Genetics and Molecular Biology, Article, 03 medical and health sciences, Cytochrome P-450 Enzyme System, Genetics, Gene family, Animals, Gene, lcsh:QH301-705.5, Population Density, Genetic diversity, Sex Chromosomes, biology, Ecology, fungi, food and beverages, Molecular Sequence Annotation, Plants, biology.organism_classification, Biological Evolution, Computational biology and bioinformatics, Rhynchophorus, 030104 developmental biology, lcsh:Biology (General), Multigene Family, DNA Transposable Elements, Insect Proteins, Weevils, Female, General Agricultural and Biological Sciences

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8f6dc5d6eb7826fac1c5983d7a469e84
http://link.springer.com/article/10.1038/s42003-020-1060-8

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3

Expansion of phycobilisome linker gene families in mesophilic red algae

المؤلفون: JunMo Lee, Hwan Su Yoon, Dongseok Kim, Debashish Bhattacharya

المصدر: Nature Communications, Vol 10, Iss 1, Pp 1-10 (2019)
Nature Communications

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, Nuclear gene, Gene Transfer, Horizontal, Science, Genome, Plastid, General Physics and Astronomy, Red algae, 01 natural sciences, Genome, General Biochemistry, Genetics and Molecular Biology, Article, Evolution, Molecular, 03 medical and health sciences, Gene Duplication, Phycobilisomes, Gene family, Plastids, Plastid, Photosynthesis, Symbiosis, lcsh:Science, Gene, Phylogeny, Genetics, Multidisciplinary, biology, Comparative genomics, fungi, food and beverages, General Chemistry, Genomics, biochemical phenomena, metabolism, and nutrition, biology.organism_classification, Genome evolution, Phylogenetics, 030104 developmental biology, Porphyridium, Rhodophyta, Molecular evolution, Phycobilisome, lcsh:Q, 010606 plant biology & botany

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eff67ce4da9c2b8a460c7356e8922877
http://link.springer.com/article/10.1038/s41467-019-12779-1

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4

Pathways for horizontal gene transfer in bacteria revealed by a global map of their plasmids

المؤلفون: Garcillán-Barcia, M. Pilar, Redondo-Salvo, Santiago, Fernández-López, Raúl, Ruiz, Raúl, Vielva, Luis, de Toro, María, Rocha, Eduardo, Garcillán-Barcia, M Pilar, de La Cruz, Fernando

المساهمون: Instituto de Biomedicina y Biotecnología de Cantabria [Santander, Espagne] (IBBTEC), Universidad de Cantabria [Santander], Centro de Investigación Biomédica de La Rioja (CIBIR), Génomique évolutive des Microbes / Microbial Evolutionary Genomics, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), This work was funded by grant BFU2017-86378-P from the Spanish MINECO, Ministerio de Economía y Competitividad (España), Agencia Estatal de Investigación (España), Universidad de Cantabria, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS)

المصدر: Nature Communications
Nature Communications, 2020, 11 (1), pp.3602. ⟨10.1038/s41467-020-17278-2⟩
Nature Communications, 2020, 11, 3602
UCrea Repositorio Abierto de la Universidad de Cantabria
Universidad de Cantabria (UC)
Nature Communications, Vol 11, Iss 1, Pp 1-13 (2020)
Nature Communications, Nature Publishing Group, 2020, 11 (1), pp.3602. ⟨10.1038/s41467-020-17278-2⟩
Digital.CSIC. Repositorio Institucional del CSIC
instname

مصطلحات موضوعية: 0301 basic medicine, Gene Transfer, Horizontal, Science, 030106 microbiology, General Physics and Astronomy, Virulence, Genomics, MESH: Algorithms, Biology, Article, General Biochemistry, Genetics and Molecular Biology, Mobile elements, Bacterial genetics, 03 medical and health sciences, Plasmid, MESH: Plasmids, [SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Genomics [q-bio.GN], lcsh:Science, MESH: Phylogeny, Gene, Phylogeny, Genetics, Multidisciplinary, [SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE], MESH: Genomics, [SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE], General Chemistry, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], MESH: Gene Transfer, Horizontal, 030104 developmental biology, MESH: Gammaproteobacteria, Horizontal gene transfer, lcsh:Q, Plasmidome, Mobile genetic elements, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], Algorithms, Gammaproteobacteria, Plasmids

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9fb8a673bca55f957a331143181b0f19
https://hal-pasteur.archives-ouvertes.fr/pasteur-03015777

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5

On the impact of uncertain gene tree rooting on duplication-transfer-loss reconciliation

المؤلفون: Mukul S. Bansal, Soumya Kundu

المصدر: BMC Bioinformatics, Vol 19, Iss S9, Pp 21-31 (2018)
BMC Bioinformatics

مصطلحات موضوعية: 0301 basic medicine, Root (linguistics), Theoretical computer science, Gene Transfer, Horizontal, Computer science, lcsh:Computer applications to medicine. Medical informatics, Biochemistry, Evolution, Molecular, Gene trees, 03 medical and health sciences, Structural Biology, Phylogenetics, Transfer (computing), Gene Duplication, Gene duplication, Gene family, Molecular Biology, Gene, lcsh:QH301-705.5, Phylogeny, Structure (mathematical logic), 030102 biochemistry & molecular biology, Phylogenetic tree, Microbial evolution, Applied Mathematics, Research, Gene tree, Uncertainty, Genomics, Reconciliation, Horizontal gene transfer, Computer Science Applications, Tree (data structure), 030104 developmental biology, lcsh:Biology (General), Multigene Family, lcsh:R858-859.7, DNA microarray, Algorithms, Software

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::154f493301f5602ebc5391bca2ee92dc
http://link.springer.com/article/10.1186/s12859-018-2269-0

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6

Genomic islands and the evolution of livestock-associated Staphylococcus aureus genomes

المؤلفون: Natesan Sivakumar, Relangi Tulasi Rao, Shivani Sharma, Kannan Jayakumar

المصدر: Bioscience Reports

مصطلحات موضوعية: 0301 basic medicine, Livestock-Associated Staphylococcus aureus, Staphylococcus aureus, Livestock, Gene Transfer, Horizontal, Genomic Islands, Bioinformatics, 030106 microbiology, Biophysics, Virulence, Bacterial genome size, Computational biology, Biology, Biochemistry, Genome, Microbiology, Evolution, Molecular, 03 medical and health sciences, Genomic island, Databases, Genetic, Animals, Molecular Biology, Gene, Research Articles, Evolutionary Biology, microbial genomics, Computational Biology, Cell Biology, Genomics, Gene Expression Regulation, Bacterial, Staphylococcal Infections, 030104 developmental biology, Horizontal gene transfer, horizontal gene transfer, Adaptation, Niche adaptation, Genome, Bacterial

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d455fc08c41ae8e41ed98a077a529b01
http://europepmc.org/articles/PMC7689654

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7

Genome streamlining in a minute herbivore that manipulates its host plant

المؤلفون: Wannes Dermauw, Ellen J. Pritham, Stephane Rombauts, Jainy Thomas, Yves Van de Peer, Nicky Wybouw, René Feyereisen, Juan M. Alba, Merijn R. Kant, Richard M. Clark, Joris J. Glas, Robert Greenhalgh, Thomas Van Leeuwen, Saioa Legarrea

المساهمون: Evolutionary and Population Biology (IBED, FNWI)

المصدر: eLife
eLife, Vol 9 (2020)
Greenhalgh, R, Dermauw, W, Glas, J J, Rombauts, S, Wybouw, N, Thomas, J, Alba, J M, Pritham, E J, Legarrea, S, Feyereisen, R, Van de Peer, Y, Van Leeuwen, T, Clark, R M & Kant, M R 2020, ' Genome streamlining in a minute herbivore that manipulates its host plant ', eLife, vol. 9 . https://doi.org/10.7554/eLife.56689
ELIFE
eLife, 9:e56689. eLife Sciences Publications

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, reverse transcriptase-mediated intron loss, 01 natural sciences, Genome, miniaturization, MULTIPLE SEQUENCE ALIGNMENT, Solanum lycopersicum, Tetranychus urticae, Biology (General), Acari, Phylogeny, TETRANYCHUS-URTICAE, Mites, biology, General Neuroscience, food and beverages, proboscipedia, Horizontal gene transfer, Proboscipedia, General Medicine, IONOTROPIC GLUTAMATE RECEPTORS, Host-Pathogen Interactions, Medicine, horizontal gene transfer, Insight, Research Article, Gene Transfer, Horizontal, QH301-705.5, Science, Genetics and Molecular Biology, Genomics, 010603 evolutionary biology, General Biochemistry, Genetics and Molecular Biology, Evolution, Molecular, 03 medical and health sciences, stomatognathic system, Molecular evolution, Animals, Herbivory, genome reduction, DRAFT GENOME, Gene, Genome size, Genome reduction, Evolutionary Biology, Miniaturization, General Immunology and Microbiology, Aculops lycopersici, fungi, Biology and Life Sciences, Genetics and Genomics, TOMATO RUSSET MITE, biology.organism_classification, MOLECULAR EVOLUTION, 030104 developmental biology, DEGENERIN/EPITHELIAL SODIUM-CHANNELS, Evolutionary biology, RNA INTERFERENCE, General Biochemistry, Human genome, ERIOPHYOID MITES, Reverse transcriptase-mediated intron loss, Other, NUCLEAR RECEPTORS