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المؤلفون: Andrey D. Prjibelski, G. Puglia, Alla Mikheenko, Daniela Giordano, Alla Lapidus, Domenico Vitale, Dmitry Antipov, Elena Bushmanova
المصدر: BMC Bioinformatics, Vol 21, Iss S12, Pp 1-9 (2020)
BMC bioinformatics 21 (2020). doi:10.1186/s12859-020-03614-2
info:cnr-pdr/source/autori:Prjibelski, Andrey D.; Puglia, Giuseppe D.; Antipov, Dmitry; Bushmanova, Elena; Giordano, Daniela; Mikheenko, Alla; Vitale, Domenico; Lapidus, Alla/titolo:Extending rnaSPAdes functionality for hybrid transcriptome assembly/doi:10.1186%2Fs12859-020-03614-2/rivista:BMC bioinformatics/anno:2020/pagina_da:/pagina_a:/intervallo_pagine:/volume:21
BMC Bioinformaticsمصطلحات موضوعية: Gene isoform, Computer science, Sequence assembly, RNA-Seq, Hybrid assembly, Computational biology, Oxford nanopores, lcsh:Computer applications to medicine. Medical informatics, Biochemistry, Transcriptome, 03 medical and health sciences, Nanopores, Exon, 0302 clinical medicine, Structural Biology, Databases, Genetic, De novo assembly, Humans, Transcriptomics, Molecular Biology, Gene, lcsh:QH301-705.5, 030304 developmental biology, 0303 health sciences, Transcriptome assembly, Applied Mathematics, Iso-seq, Reproducibility of Results, RNA, Pipeline (software), Computer Science Applications, Nanopore, lcsh:Biology (General), MCF-7 Cells, lcsh:R858-859.7, Nanopore sequencing, DNA microarray, 030217 neurology & neurosurgery, Software, Algorithms, Reference genome
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المؤلفون: Byung Cheol Cho, Nikos C. Kyrpides, Marcel Huntemann, Manoj Pillay, Markus Göker, Supratim Mukherjee, Brian J. Tindall, Neha Varghese, Hans-Peter Klenk, Natalia Ivanova, Alla Lapidus, T. B. K. Reddy, Tanja Woyke, Gwang Ii Jang, Alex Copeland, Dong Han Choi
المصدر: Standards in Genomic Sciences, Vol 12, Iss 1, Pp 1-7 (2017)
Standards in Genomic Sciencesمصطلحات موضوعية: 0301 basic medicine, Whole genome sequencing, Marinobacterium rhizophilum, Rhizosphere, Genome, lcsh:QH426-470, Suaeda Japonica, RNA, Ectoine, Biology, Short Genome Report, 03 medical and health sciences, chemistry.chemical_compound, lcsh:Genetics, 030104 developmental biology, Betaine, chemistry, GEBA, Botany, Genetics, Osmoprotectant, Gene
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المصدر: Bioinformatics. 32:2210-2212
مصطلحات موضوعية: 0301 basic medicine, Statistics and Probability, 030102 biochemistry & molecular biology, Sequence Analysis, RNA, Quality assessment, Computer science, Sequence analysis, Computational Biology, RNA, Computational biology, Biochemistry, Computer Science Applications, Transcriptome, 03 medical and health sciences, Computational Mathematics, 030104 developmental biology, Computational Theory and Mathematics, Molecular Biology, Gene, Software, Reference genome
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a00e503642fcaade655825005b45c1c4
https://doi.org/10.1093/bioinformatics/btw218 -
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المؤلفون: Hans-Peter Klenk, Markus Göker, Jan Fang Cheng, Nikos C. Kyrpides, Matt Nolan, Philip Hugenholtz, Manfred Rohde, Krishna Palaniappan, Miriam Land, Roxanne Tapia, Tanja Woyke, Amrita Pati, Lynne Goodwin, Chongle Pan, James Bristow, Ioanna Pagani, Sam Pitluck, Konstantinos Mavromatis, Nancy Hammon, Natalia Ivanova, Susan Lucas, Sabine Gronow, Jonathan A. Eisen, John C. Detter, Shweta Deshpande, Natalia Mikhailova, Marcel Huntemann, Alla Lapidus, Victor Markowitz, Konstantinos Liolios, Amy Chen, Olga Chertkov, Erko Stackebrandt
المساهمون: Central unit for microscopy, Helmholtz Centre for infecton research,D38124 Braunschweig, Germany
المصدر: Standards in Genomic Sciences
Standards in genomic sciences, vol 8, iss 2مصطلحات موضوعية: Genome, mesophile, Leptospira, Genus, GEBA, Leptospiraceae, Genetics, Gene, Whole genome sequencing, biology, non-sporulating, Human Genome, axial filaments, RNA, Leptonema, biology.organism_classification, Gram-negative, Short Genome Reports, aerobic, motile, Biochemistry and Cell Biology, flexible, helical, Biotechnology
وصف الملف: application/pdf
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المؤلفون: Ying Wang, Archana Chauhan, Natalia Mikhailova, Thomas Brettin, David Bruce, Alla Lapidus, Alice C. Layton, John C. Detter, Susan Lucas, Dan Close, Gary S. Sayler, Nikos C. Kyrpides, Cliff Han, Loren Hauser, David Sims, Miriam Land, Jennifer M. DeBruyn, Hope Tice, Sam Pitluck, Frank W. Larimer, Scott Moser, Michael S. Allen, Yao-Jen Chang, Alex Copeland, Eileen Dalin, John Sanseverino, Lynne Goodwin, Ke Jiang, Patricia Jegier, Tijana Glavina del Rio
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: Whole genome sequencing, Genetics, biology, Strain (chemistry), RNA, Chromosome, biology.organism_classification, Genome, Short Genome Reports, MZ1T, Plasmid, Thauera aminoaromatica, Gene, genome, Betaproteobacteria
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المؤلفون: Alla Lapidus, Victor Markowitz, Lynne Goodwin, Miriam Land, Konstantinos Liolios, Cynthia D. Jeffries, Thomas Brettin, Jan Fang Cheng, Sam Pitluck, Hans-Peter Klenk, Natalia Mikhailova, John C. Detter, Susan Lucas, Krishna Palaniappan, Konstantinos Mavromatis, Galina Ovchinnikova, Hope Tice, Tanja Woyke, Johannes Sikorski, Olivier Duplex Ngatchou Djao, Cliff Han, Loren Hauser, Natalia Ivanova, Amy Chen, Matt Nolan, Nikos C. Kyrpides, Philip Hugenholtz, Amrita Pati, James Bristow, Olga Chertkov, Yun Juan Chang, Manfred Rohde, Markus Göker, Tijana Glavina del Rio, Jonathan A. Eisen
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: Genetics, Whole genome sequencing, facultative aerobe, eurythermal thermophile, biology, RNA, chemoorganotroph, biology.organism_classification, Genome, Short Genome Reports, Type species, Gram-positive, cellulose degradation, Genus, Thermomonosporaceae, GEBA, Primary nutritional groups, mycelium, Gene, Archaea
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المؤلفون: Natalia Ivanova, Alla Lapidus, Victor Markowitz, Tanja Woyke, Rüdiger Pukall, Yun Juan Chang, Manfred Rohde, Olga Chertkov, Jonathan A. Eisen, Matt Nolan, Natalia Mikhailova, Tijana Glavina del Rio, Jan Fang Cheng, Amy Chen, Montri Yasawong, Konstantinos Liolios, Roxane Tapia, Markus Göker, Krishna Palaniappan, Hope Tice, Evelyne Brambilla, Amrita Pati, Konstantinos Mavromatis, Stefan Spring, James Bristow, Nikos C. Kyrpides, Philip Hugenholtz, Cynthia D. Jeffries, Hans-Peter Klenk, Cliff Han, Loren Hauser, Sam Pitluck, Lynne Goodwin, Susan Lucas, Miriam Land, Johannes Sikorski
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: Whole genome sequencing, Genetics, none-motile, strictly anaerobic, RNA, chemoorganotrophic, Biology, biology.organism_classification, Genome, Gram-negative, Short Genome Reports, Type species, Plasmid, GEBA, mesophilic, Fusobacteriaceae, Gene, 3-hydroxybutyrate, Archaea, Sequence (medicine)
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المؤلفون: Loren Hauser, Jan Fang Cheng, Nikos C. Kyrpides, Stefan Spring, Philip Hugenholtz, Reinhard Wirth, Lynne Goodwin, Susan Lucas, Yun Juan Chang, Manfred Rohde, Hazuki Teshima, Krishna Palaniappan, Natalia Ivanova, Hans-Peter Klenk, Cynthia D. Jeffries, Alla Lapidus, David Bruce, Victor Markowitz, Tanja Woyke, Natalia Mikhailova, Konstantinos Mavromatis, Konstantinos Liolios, Matt Nolan, Tijana Glavina del Rio, Elke Pabst, Markus Göker, Johannes Sikorski, Jonathan A. Eisen, Miriam Land, Amrita Pati, James Bristow, Sam Pitluck, Amy Chen
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: microaerotolerant anaerobe, Whole genome sequencing, Genetics, biology, Thermoproteaceae, Strain (biology), hyperthermophilic, Crenarchaeota, RNA, biology.organism_classification, Genome, Short Genome Reports, GEBA, acidophilic, non-motile, Gene, Archaea
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المؤلفون: Susanne Schneider, Natalia Ivanova, John C. Detter, Matt Nolan, Krishna Palaniappan, Tijana Glavina del Rio, Olga Chertkov, Konstantinos Mavromatis, Marlen Jando, Konstantinos Liolios, Johannes Sikorski, Miriam Land, Susan Lucas, Nikos C. Kyrpides, Sam Pitluck, Lynne Goodwin, Monica Misra, Hans-Peter Klenk, Yun Juan Chang, Philip Hugenholtz, Manfred Rohde, Cliff Han, Cynthia D. Jeffries, Loren Hauser, Natalia Mikhailova, Amrita Pati, Markus Göker, Thomas Brettin, James Bristow, Jan Fang Cheng, Hope Tice, Alex Copeland, Amy Chen, Feng Chen, Jonathan A. Eisen, Alla Lapidus, David Bruce, Victor Markowitz
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: Whole genome sequencing, Genetics, biology, Strain (biology), opportunistic pathogen, RNA, biology.organism_classification, Genome, Short Genome Reports, aerobic, novel mycolic acid, Type species, Genus, GEBA, Corynebacterineae, non-sporeforming, Gene
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المؤلفون: Jonathan A. Eisen, Alla Lapidus, Amy Chen, Thomas Brettin, Hans-Peter Klenk, Jim Bristow, Birte Abt, John C. Detter, Feng Chen, Markus Göker, Konstantinos Mavromatis, Stefan Spring, Patrick S. G. Chain, Natalia Mikhailova, Amrita Pati, Nikos Kyrpides, Miriam Land, Cynthia D. Jeffries, Hope Tice, Victor Markowitz, Sam Pitluck, Lynne Goodwin, Loren Hauser, Matt Nolan, David Bruce, Yun Juan Chang, Manfred Rohde, Natalia Ivanova, Jan-Fang Cheng, Philip Hugenholtz, Alex Copeland, Tijana Glavina del Rio, Krishna Palaniappan, Susan Lucas, Elizabeth Saunders
المصدر: Standards in Genomic Sciences
مصطلحات موضوعية: Genetics, Whole genome sequencing, biology, filamentous, Strain (biology), RNA, biology.organism_classification, Genome, Gram-negative, Short Genome Reports, gliding, myxospores, aerobic, biomass degrader, Type species, mesophile, ‘Chitinophagaceae’, GEBA, Replicon, chitinolytic, Gene, Archaea
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