المؤلفون: Lucas MC; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Pryszcz LP; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain., Medina R; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain., Milenkovic I; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Camacho N; Institute for Research in Biomedicine (IRB), Barcelona, Spain., Marchand V; CNRS-Université de Lorraine, UAR2008 IBSLor/UMR7365 IMoPA, Nancy, France., Motorin Y; CNRS-Université de Lorraine, UAR2008 IBSLor/UMR7365 IMoPA, Nancy, France., Ribas de Pouplana L; Institute for Research in Biomedicine (IRB), Barcelona, Spain.; Catalan Institution for Research and Advanced Studies (ICREA), Barcelona, Spain., Novoa EM; Centre for Genomic Regulation (CRG), Barcelona Institute of Science and Technology, Barcelona, Spain. eva.novoa@crg.eu.; Universitat Pompeu Fabra (UPF), Barcelona, Spain. eva.novoa@crg.eu.

المصدر: Nature biotechnology [Nat Biotechnol] 2024 Jan; Vol. 42 (1), pp. 72-86. Date of Electronic Publication: 2023 Apr 06.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Nanopore Sequencing* , Nanopores*, RNA ; RNA, Transfer/chemistry ; Sequence Analysis, RNA/methods

المؤلفون: Pryszcz LP; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona 08003, Spain.; International Institute of Molecular and Cell Biology, 02-109 Warsaw, Poland., Novoa EM; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona 08003, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain.

المصدر: Bioinformatics (Oxford, England) [Bioinformatics] 2021 Dec 22; Vol. 38 (1), pp. 257-260.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

مواضيع طبية MeSH: Nanopore Sequencing* , Nanopores*, Sequence Analysis, DNA/methods ; Software ; DNA ; RNA ; High-Throughput Nucleotide Sequencing

المؤلفون: Begik O; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.; UNSW Sydney, Kensington, NSW, Australia., Lucas MC; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Pryszcz LP; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; International Institute of Molecular and Cell Biology, Warsaw, Poland., Ramirez JM; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain., Medina R; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain., Milenkovic I; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Cruciani S; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra (UPF), Barcelona, Spain., Liu H; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain., Vieira HGS; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain., Sas-Chen A; Weizmann Institute of Science, Rehovot, Israel., Mattick JS; UNSW Sydney, Kensington, NSW, Australia., Schwartz S; Weizmann Institute of Science, Rehovot, Israel., Novoa EM; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain. eva.novoa@crg.eu.; Universitat Pompeu Fabra (UPF), Barcelona, Spain. eva.novoa@crg.eu.

المصدر: Nature biotechnology [Nat Biotechnol] 2021 Oct; Vol. 39 (10), pp. 1278-1291. Date of Electronic Publication: 2021 May 13.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Nanopore Sequencing/*methods , Pseudouridine/*metabolism , RNA/*metabolism , Sequence Analysis, RNA/*methods, Algorithms ; Gene Expression Profiling ; Intramolecular Transferases/metabolism ; Mitochondria/genetics ; Pseudouridine/genetics ; RNA/genetics ; RNA Processing, Post-Transcriptional/genetics ; RNA, Fungal/genetics ; RNA, Fungal/metabolism ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; RNA, Ribosomal/genetics ; RNA, Ribosomal/metabolism ; Saccharomyces cerevisiae/genetics ; Software ; Stress, Physiological/genetics

المؤلفون: Kubiak-Szymendera M; Department of Biotechnology and Food Microbiology, Poznan University of Life Sciences, 460-637 Poznań, Poland., Pryszcz LP; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, 08003 Barcelona, Spain., Białas W; Department of Biotechnology and Food Microbiology, Poznan University of Life Sciences, 460-637 Poznań, Poland., Celińska E; Department of Biotechnology and Food Microbiology, Poznan University of Life Sciences, 460-637 Poznań, Poland.

المصدر: Microorganisms [Microorganisms] 2021 Aug 24; Vol. 9 (9). Date of Electronic Publication: 2021 Aug 24.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101625893 Publication Model: Electronic Cited Medium: Print ISSN: 2076-2607 (Print) Linking ISSN: 20762607 NLM ISO Abbreviation: Microorganisms Subsets: PubMed not MEDLINE

المؤلفون: Mixão V; Life Sciences Department, Barcelona Supercomputing Center (BSC), Jordi Girona, 29, 08034 Barcelona, Spain.; Mechanisms of Disease Department, Institute for Research in Biomedicine (IRB), Barcelona, Spain., Hegedűsová E; Faculty of Natural Sciences, Department of Biochemistry, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovak Republic., Saus E; Life Sciences Department, Barcelona Supercomputing Center (BSC), Jordi Girona, 29, 08034 Barcelona, Spain.; Mechanisms of Disease Department, Institute for Research in Biomedicine (IRB), Barcelona, Spain., Pryszcz LP; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain., Cillingová A; Faculty of Natural Sciences, Department of Biochemistry, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovak Republic., Nosek J; Faculty of Natural Sciences, Department of Biochemistry, Comenius University in Bratislava, Ilkovičova 6, 842 15 Bratislava, Slovak Republic., Gabaldón T; Life Sciences Department, Barcelona Supercomputing Center (BSC), Jordi Girona, 29, 08034 Barcelona, Spain.; Mechanisms of Disease Department, Institute for Research in Biomedicine (IRB), Barcelona, Spain.; ICREA, Pg. Lluis Companys 23, Barcelona 08010, Spain.

المصدر: DNA research : an international journal for rapid publication of reports on genes and genomes [DNA Res] 2021 Jun 25; Vol. 28 (3).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9423827 Publication Model: Print Cited Medium: Internet ISSN: 1756-1663 (Electronic) Linking ISSN: 13402838 NLM ISO Abbreviation: DNA Res Subsets: MEDLINE

مواضيع طبية MeSH: Genome, Fungal* , Genome, Mitochondrial* , Metabolic Networks and Pathways*, Candida/*genetics , Cell Nucleus/*genetics , Phenols/*metabolism, Candida/metabolism ; Whole Genome Sequencing

SCR Organism: Candida subhashii

المؤلفون: Chorostecki U; Barcelona Supercomputing Centre (BSC-CNS), 08034 Barcelona, Spain.; Institute for Research in Biomedicine (IRB), The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain., Molina M; Barcelona Supercomputing Centre (BSC-CNS), 08034 Barcelona, Spain.; Institute for Research in Biomedicine (IRB), The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain., Pryszcz LP; Centre for Genomic Regulation, 08003 Barcelona, Spain.; International Institute of Molecular and Cell Biology, 4 Ks. Trojdena Street, 02-109 Warsaw, Poland., Gabaldón T; Barcelona Supercomputing Centre (BSC-CNS), 08034 Barcelona, Spain.; Institute for Research in Biomedicine (IRB), The Barcelona Institute of Science and Technology, 08028 Barcelona, Spain.; ICREA, 08010 Barcelona, Spain.

المصدر: Nucleic acids research [Nucleic Acids Res] 2020 Jul 02; Vol. 48 (W1), pp. W553-W557.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Multigene Family* , Phylogeny* , Software*, Sequence Homology

المؤلفون: Cozzuto L; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain., Liu H; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain., Pryszcz LP; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.; International Institute of Molecular and Cell Biology, Warsaw, Poland., Pulido TH; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain., Delgado-Tejedor A; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra, Barcelona, Spain., Ponomarenko J; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra, Barcelona, Spain., Novoa EM; Centre for Genomic Regulation, The Barcelona Institute of Science and Technology, Barcelona, Spain.; Universitat Pompeu Fabra, Barcelona, Spain.; Department of Neuroscience, Garvan Institute of Medical Research, Darlinghurst, NSW, Australia.; St Vincent's Clinical School, UNSW Sydney, Darlinghurst, NSW, Australia.

المصدر: Frontiers in genetics [Front Genet] 2020 Mar 17; Vol. 11, pp. 211. Date of Electronic Publication: 2020 Mar 17 (Print Publication: 2020).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101560621 Publication Model: eCollection Cited Medium: Print ISSN: 1664-8021 (Print) Linking ISSN: 16648021 NLM ISO Abbreviation: Front Genet Subsets: PubMed not MEDLINE

المؤلفون: Hodorová V; Department of Biochemistry, Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovak Republic., Lichancová H; Department of Biochemistry, Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovak Republic., Zubenko S; Kyiv Academic University, Kiev, Ukraine., Sienkiewicz K; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland., Penir SMU; Department of Meiosis, Max Planck Institute for Biophysical Chemistry, Göttingen, Germany., Afanasyev P; Laboratory of Evolutionary Genomics, Vavilov Institute of General Genetics, Moscow, Russia., Boceck D; Algorithms in Bioinformatics, ZBIT Center for Bioinformatics, University of Tübingen, Tübingen, Germany., Bonnin S; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain., Hakobyan S; Institute of Molecular Biology NAS RA, Yerevan, Armenia., Smyczynska U; Department of Biostatistics and Translational Medicine, Medical University of Lodz, Lodz, Poland., Zhivkoplias E; Biology Education Centre, Uppsala University, Uppsala, Sweden., Zlatohurska M; Institute of Microbiology and Virology, National Academy of Science of Ukraine, Kiev, Ukraine., Tralle E; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland., Frolova A; Kyiv Academic University, Kiev, Ukraine.; Institute of Molecular Biology and Genetics, National Academy of Sciences of Ukraine, Kiev, Ukraine., Pryszcz LP; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Barcelona, Spain.; International Institute of Molecular and Cell Biology in Warsaw, Warsaw, Poland., Brejová B; Department of Computer Science, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava, Bratislava, Slovak Republic brejova@dcs.fmph.uniba.sk jozef.nosek@uniba.sk., Vinař T; Department of Applied Informatics, Faculty of Mathematics, Physics and Informatics, Comenius University in Bratislava, Bratislava, Slovak Republic., Nosek J; Department of Biochemistry, Faculty of Natural Sciences, Comenius University in Bratislava, Bratislava, Slovak Republic brejova@dcs.fmph.uniba.sk jozef.nosek@uniba.sk.

المصدر: Microbiology resource announcements [Microbiol Resour Announc] 2019 Dec 12; Vol. 8 (50). Date of Electronic Publication: 2019 Dec 12.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101728794 Publication Model: Electronic Cited Medium: Internet ISSN: 2576-098X (Electronic) Linking ISSN: 2576098X NLM ISO Abbreviation: Microbiol Resour Announc Subsets: PubMed not MEDLINE

المؤلفون: Negri A; Department of Microbiology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, Gdansk 80-308, Poland., Jąkalski M; Department of Plant Taxonomy and Nature Conservation, University of Gdansk, Wita Stwosza 59, 80-308 Gdansk, Poland., Szczuka A; Department of Microbiology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, Gdansk 80-308, Poland., Pryszcz LP; Laboratory of Zebrafish Developmental Genomics, International Institute of Molecular and Cell Biology, Warsaw, ul. Trojdena 4, 02-109 Warsaw, Poland., Mruk I; Department of Microbiology, Faculty of Biology, University of Gdansk, Wita Stwosza 59, Gdansk 80-308, Poland.

المصدر: Nucleic acids research [Nucleic Acids Res] 2019 Oct 10; Vol. 47 (18), pp. 9542-9556.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Bacteriophages/*genetics , DNA Restriction-Modification Enzymes/*genetics , Escherichia coli/*genetics , Host-Pathogen Interactions/*genetics, Amino Acid Sequence/genetics ; Bacteriophages/pathogenicity ; Citrobacter/genetics ; DNA Restriction Enzymes/genetics ; DNA, Bacterial/chemistry ; DNA, Bacterial/genetics ; Deoxyribonucleases, Type II Site-Specific/genetics ; Escherichia coli/virology ; Gene Expression Profiling/methods ; Gene Expression Regulation, Bacterial ; Gene Transfer, Horizontal/genetics ; Phenotype ; Transcription Factors/genetics ; Viral Proteins/genetics

المؤلفون: Bizzarri M; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy., Cassanelli S; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy., Bartolini L; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy., Pryszcz LP; Laboratory of Zebrafish Developmental Genomics, International Institute of Molecular and Cell Biology, Warsaw, Poland., Dušková M; Department of Membrane Transport, Institute of Physiology, Czech Academy of Sciences, Prague, Czechia., Sychrová H; Department of Membrane Transport, Institute of Physiology, Czech Academy of Sciences, Prague, Czechia., Solieri L; Department of Life Sciences, University of Modena and Reggio Emilia, Reggio Emilia, Italy.

المصدر: Frontiers in genetics [Front Genet] 2019 Mar 01; Vol. 10, pp. 137. Date of Electronic Publication: 2019 Mar 01 (Print Publication: 2019).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101560621 Publication Model: eCollection Cited Medium: Print ISSN: 1664-8021 (Print) Linking ISSN: 16648021 NLM ISO Abbreviation: Front Genet Subsets: PubMed not MEDLINE