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1دورية أكاديمية
المؤلفون: Alexander Karollus, Žiga Avsec, Julien Gagneur
المصدر: PLoS Computational Biology, Vol 17, Iss 5, p e1008982 (2021)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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2دورية أكاديمية
المؤلفون: Jun Cheng, Thi Yen Duong Nguyen, Kamil J. Cygan, Muhammed Hasan Çelik, William G. Fairbrother, žiga Avsec, Julien Gagneur
المصدر: Genome Biology, Vol 20, Iss 1, Pp 1-15 (2019)
مصطلحات موضوعية: Splicing, Variant effect, Variant pathogenicity, Deep learning, Modular modeling, Biology (General), QH301-705.5, Genetics, QH426-470
وصف الملف: electronic resource
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المؤلفون: Rita Casadio, Jun Cheng, Ron Unger, Žiga Avsec, Ken Chen, Noa E. Cohen, Julien Gagneur, Chiao-Feng Lin, Robert Y. Wang, William G. Fairbrother, Yuedong Yang, Tamar Holzer, Thi Yen Duong Nguyen, Pier Luigi Martelli, Tzila Fenesh, Liran Carmel, Stephen M. Mount, Valer Gotea, Castrense Savojardo, Muhammed Hasan Çelik, Huiying Zhao, Tatsuhiko Naito
المساهمون: Mount S.M., Avsec Z., Carmel L., Casadio R., Celik M.H., Chen K., Cheng J., Cohen N.E., Fairbrother W.G., Fenesh T., Gagneur J., Gotea V., Holzer T., Lin C.-F., Martelli P.L., Naito T., Nguyen T.Y.D., Savojardo C., Unger R., Wang R., Yang Y., Zhao H.
المصدر: Hum Mutat
مصطلحات موضوعية: Sequencing data, Computational biology, Biology, Genome, Article, splicing, 03 medical and health sciences, Exon, Sequence Homology, Nucleic Acid, Genetics, CAGI experiment, Animals, Humans, Sequence variation, Genetics (clinical), 030304 developmental biology, Sequence (medicine), 0303 health sciences, Models, Genetic, variant interpretation, 030305 genetics & heredity, Computational Biology, Proteins, Congresses as Topic, Precision medicine, Alternative Splicing, machine learning, Mutation, RNA splicing, Critical assessment, Genetic Fitness
وصف الملف: STAMPA
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المؤلفون: Agnieszka Grabska-Barwinska, Kyle R. Taylor, Žiga Avsec, Pushmeet Kohli, Daniel Visentin, John M. Jumper, David R. Kelley, Joseph R. Ledsam, Vikram Agarwal, Yannis M. Assael
المصدر: Nature Methods
مصطلحات موضوعية: Computer science, Cell Biology, Computational biology, Biochemistry, Noncoding DNA, Genome, Article, Human genetics, DNA sequencing, Gene expression, Machine learning, 1000 Genomes Project, Saturated mutagenesis, Transcriptomics, Enhancer, Molecular Biology, Massively parallel, Gene, Software, Biotechnology, Sequence (medicine)
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::49ff44bafa5e6961f7e3193418ee0609
https://doi.org/10.1101/2021.04.07.438649 -
5
المؤلفون: Roman Kreuzhuber, Nancy Xu, Thorsten Beier, Žiga Avsec, Daniel S Kim, Jun Cheng, Johnny Israeli, Lara Urban, Avanti Shrikumar, Anshul Kundaje, Abhimanyu Banerjee, Oliver Stegle, Julien Gagneur
المصدر: Nature biotechnology
مصطلحات موضوعية: Databases, Factual, Computer science, Biomedical Engineering, MEDLINE, Bioengineering, Genomics, Reuse, Applied Microbiology and Biotechnology, Genome, Article, Machine Learning, 03 medical and health sciences, 0302 clinical medicine, Humans, 030304 developmental biology, Gene Editing, 0303 health sciences, Whole Genome Sequencing, Extramural, Genome, Human, Data science, Human genetics, ddc, Genome informatics, Molecular Medicine, 030217 neurology & neurosurgery, Biotechnology
وصف الملف: application/pdf
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المؤلفون: Amr Alexandari, Avanti Shrikumar, Julia Zeitlinger, Charles McAnany, Žiga Avsec, Melanie Weilert, Anshul Kundaje, Khyati Dalal, Julien Gagneur, Sabrina Krueger, Robin Fropf
المصدر: Nature genetics. 53(3)
مصطلحات موضوعية: Chromatin Immunoprecipitation, Genomics, Computational biology, Biology, DNA sequencing, Mice, Deep Learning, Genetics, CRISPR, Animals, Clustered Regularly Interspaced Short Palindromic Repeats, Nucleotide Motifs, Transcription factor, Binding Sites, Syntax (programming languages), Point mutation, SOXB1 Transcription Factors, Palindrome, Computational Biology, Reproducibility of Results, Mouse Embryonic Stem Cells, Nanog Homeobox Protein, Neural Networks, Computer, Chromatin immunoprecipitation, Octamer Transcription Factor-3, Transcription Factors
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7
المؤلفون: Avanti Shrikumar, Julia Zeitlinger, Charles McAnany, Khyati Dalal, Melanie Weilert, Julien Gagneur, Žiga Avsec, Anshul Kundaje, Sabrina Krueger, Robin Fropf, Amr Alexandari
مصطلحات موضوعية: Homeobox protein NANOG, Computer science, Nucleosome, Retrotransposon, Motif (music), Computational biology, Enhancer, Gene, Genome, Transcription factor
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::827a19aec6fe26a5ce1beaada1146c7d
https://doi.org/10.1101/737981 -
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المؤلفون: Kerstin C. Maier, Petra Rus, Žiga Avsec, Jun Cheng, Julien Gagneur
المصدر: RNA
مصطلحات موضوعية: 0301 basic medicine, Genetics, Exonuclease, Untranslated region, Messenger RNA, biology, Three prime untranslated region, Nonsense-mediated decay, Genomics, Computational biology, biology.organism_classification, Genome, Article, 03 medical and health sciences, 030104 developmental biology, 0302 clinical medicine, Codon usage bias, Schizosaccharomyces pombe, Gene expression, biology.protein, Molecular Biology, Gene, Function (biology), 030217 neurology & neurosurgery
وصف الملف: application/pdf; application/vnd.openxmlformats-officedocument.wordprocessingml.document; application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b9307a126eeb408f0ec4b10f6cada70a
https://doi.org/10.1261/rna.062224.117 -
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المؤلفون: Julien Gagneur, Žiga Avsec, Fabian J. Theis, Gökcen Eraslan
المصدر: Nature reviews. Genetics. 20(7)
مصطلحات موضوعية: Genomic data, Big data, Genomics, Biology, Machine learning, computer.software_genre, 03 medical and health sciences, 0302 clinical medicine, Software, Deep Learning, Genetics, Humans, Computer Simulation, Molecular Biology, Genetics (clinical), 030304 developmental biology, 0303 health sciences, Artificial neural network, Base Sequence, Models, Genetic, business.industry, Deep learning, Unsupervised learning, Artificial intelligence, Neural Networks, Computer, Supervised Machine Learning, business, computer, Relevant information, 030217 neurology & neurosurgery, Unsupervised Machine Learning
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المصدر: Hum Mutat
مصطلحات موضوعية: 0303 health sciences, Models, Genetic, RNA Splicing, 030305 genetics & heredity, Genetic variants, Intron, Computational Biology, Genetic Variation, Computational biology, Exons, Biology, Congresses as Topic, Genome, Exon skipping, Introns, Article, 03 medical and health sciences, RNA splicing, Genetics, Humans, Critical assessment, Genetic Predisposition to Disease, Genetics (clinical), Software, 030304 developmental biology
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