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1دورية أكاديمية
المصدر: Data in Brief, Vol 20, Iss , Pp 1629-1638 (2018)
مصطلحات موضوعية: Computer applications to medicine. Medical informatics, R858-859.7, Science (General), Q1-390
وصف الملف: electronic resource
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المؤلفون: Andriy Kryshtafovych, Bohdan Monastyrskyy, Sony Malhotra, Agnel‐Praveen Joseph, Maya Topf, Wah Chiu, Tristan Cragnolini
المصدر: Proteins: Structure, Function, and Bioinformatics. 87:1128-1140
مصطلحات موضوعية: 0303 health sciences, Materials science, Similarity (geometry), Cryo-electron microscopy, 030302 biochemistry & molecular biology, Resolution (electron density), Protein structure prediction, Biochemistry, Set (abstract data type), 03 medical and health sciences, Structural Biology, Microscopy, A priori and a posteriori, CASP, Biological system, Molecular Biology, 030304 developmental biology
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المصدر: Proteins
مصطلحات موضوعية: Models, Molecular, Protein Folding, Protein Conformation, Computer science, Protein domain, Biochemistry, Article, Domain (software engineering), 03 medical and health sciences, Structural Biology, Server, Amino Acid Sequence, Databases, Protein, Cluster analysis, CASP, Molecular Biology, 030304 developmental biology, 0303 health sciences, Sequence, business.industry, 030302 biochemistry & molecular biology, Computational Biology, Proteins, Pattern recognition, Protein tertiary structure, Protein Structure, Tertiary, Template, Artificial intelligence, business, Sequence Alignment
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المصدر: Data in Brief, Vol 20, Iss, Pp 1629-1638 (2018)
مصطلحات موضوعية: 0301 basic medicine, Multidisciplinary, Distribution (number theory), Computer science, Bioengineering, lcsh:Computer applications to medicine. Medical informatics, computer.software_genre, 03 medical and health sciences, 030104 developmental biology, lcsh:R858-859.7, Statistical analysis, Data mining, lcsh:Science (General), computer, lcsh:Q1-390
وصف الملف: application/pdf
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المؤلفون: Martyn Winn, Maxim Igaev, Bohdan Monastyrskyy, Genki Terashi, Catherine L. Lawson, Mark A. Herzik, Jianlin Cheng, Michael F. Schmid, Renzhi Cao, Kevin Cowtan, Mateusz Olek, Dilip Kumar, Jonas Pfab, Stephanie A. Wankowicz, Wah Chiu, Luisa U. Schäfer, Paul D. Adams, Grigore D. Pintilie, Daipayan Sarkar, Sumit Mittal, Daisuke Kihara, Frank DiMaio, Zhe Wang, Tianqi Wu, Andriy Kryshtafovych, Tom Burnley, Mrinal Shekhar, Paul S. Bond, Gunnar F. Schröder, Li-Wei Hung, Andrea C. Vaiana, Ardan Patwardhan, Daniel P. Farrell, Liguo Wang, Ken A. Dill, Pavel V. Afonine, Jane S. Richardson, Agnel Praveen Joseph, Xiaodi Yu, Helen M. Berman, Singharoy A, Alberto Perez, Thomas C. Terwilliger, Kaiming Zhang, Jie Hou, Soon Wen Hoh, James S. Fraser, Dong Si, Peter B. Rosenthal, Colin M. Palmer, Benjamin A Barad, Matthew L. Baker, Grzegorz Chojnowski, Christopher J. Williams
المصدر: Nature Methods
Nature methods 18(2), 156-164 (2021). doi:10.1038/s41592-020-01051-w
Nature methods, vol 18, iss 2مصطلحات موضوعية: Models, Molecular, Technology, Statistical methods, Computer science, Protein Conformation, computer.software_genre, Crystallography, X-Ray, Biochemistry, Medical and Health Sciences, Model validation, 0302 clinical medicine, Software, Models, media_common, 0303 health sciences, Crystallography, Protein databases, Biological Sciences, Networking and Information Technology R&D, Biotechnology, Validation study, Modeling software, media_common.quotation_subject, Context (language use), Bioengineering, Machine learning, 03 medical and health sciences, Benchmark (surveying), Quality (business), ddc:610, Molecular Biology, 030304 developmental biology, Structure (mathematical logic), business.industry, Cryoelectron Microscopy, Molecular, Proteins, Cell Biology, X-Ray, Artificial intelligence, Generic health relevance, business, computer, 030217 neurology & neurosurgery, Analysis, Developmental Biology
وصف الملف: application/pdf
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المؤلفون: Sergei Grudinin, Jose M. Duarte, Curtis D. Hodge, Dmytro Guzenko, John A. Tainer, Bohdan Monastyrskyy, Daniel J. Rosenberg, Susan E. Tsutakawa, Greg L. Hura, Krzysztof Fidelis, Andriy Kryshtafovych
المساهمون: Lawrence Berkeley National Laboratory [Berkeley] (LBNL), Department of Chemistry and Biochemistry [Santa Cruz], University of California [Santa Cruz] (UC Santa Cruz), University of California (UC)-University of California (UC), San Diego Supercomputer Center [San Diego], Genome Center [UC Davis], University of California [Davis] (UC Davis), Algorithms for Modeling and Simulating Nanosystems [2018-...] (NANO-D-POST [2018-2020]), Inria Grenoble - Rhône-Alpes, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria), University of California [Santa Cruz] (UCSC), University of California-University of California, Algorithms for Modeling and Simulation of Nanosystems (NANO-D), Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Laboratoire Jean Kuntzmann (LJK ), Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])
المصدر: Proteins-Structure, Function and Bioinformatics
Proteins-Structure, Function and Bioinformatics, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1298-1314. ⟨10.1002/prot.25827⟩
Proteins, vol 87, iss 12
Proteins
Proteins-Structure, Function and Bioinformatics, Wiley, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1298-1314. ⟨10.1002/prot.25827⟩مصطلحات موضوعية: Models, Molecular, Small Angle, Protein Folding, experimental restraints, Domain level, Protein Conformation, Bioinformatics, Bioengineering, Biochemistry, Article, Mathematical Sciences, Scattering, [PHYS.PHYS.PHYS-COMP-PH]Physics [physics]/Physics [physics]/Computational Physics [physics.comp-ph], 03 medical and health sciences, X-Ray Diffraction, Structural Biology, Models, Information and Computing Sciences, Scattering, Small Angle, [CHIM.CRIS]Chemical Sciences/Cristallography, unstructured regions, CASP, Molecular Biology, 030304 developmental biology, 0303 health sciences, complexes, Small-angle X-ray scattering, 030302 biochemistry & molecular biology, Proteins, Computational Biology, Molecular, modeling, SAXS, disorder, Protein structure prediction, Biological Sciences, solution scattering, Solution structure, structure prediction, Solutions, [SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics, Prediction algorithms, flexibility, Data quality, SAS, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], Algorithm, Predictive modelling, Algorithms
وصف الملف: application/pdf
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المؤلفون: Rojan Shrestha, Eduardo Fajardo, Andras Fiser, Krzysztof Fidelis, Nelson Gil, Andriy Kryshtafovych, Bohdan Monastyrskyy
المصدر: Proteins
مصطلحات موضوعية: 0303 health sciences, Sequence, Artificial neural network, business.industry, Computer science, 030302 biochemistry & molecular biology, Machine learning, computer.software_genre, Biochemistry, Article, 03 medical and health sciences, Structural Biology, Artificial intelligence, Evolutionary information, business, Protein structure modeling, Molecular Biology, computer, 030304 developmental biology
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::054324e1d6b431a0435c03c9106b6af8
https://europepmc.org/articles/PMC6851495/ -
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المصدر: Physico-mathematical modelling and informational technologies. :55-62
مصطلحات موضوعية: Materials science, Delamination, Heat sink, Composite material, Ring (chemistry), Action (physics)
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::f76b102799f6b9020b54b87cd17d85da
https://doi.org/10.15407/fmmit2017.26.055 -
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المصدر: Proteins
مصطلحات موضوعية: Models, Molecular, Computer science, Protein Conformation, Machine learning, computer.software_genre, Biochemistry, Article, 03 medical and health sciences, Deep Learning, Structural Biology, Sequence Analysis, Protein, Server, Component (UML), CASP, Databases, Protein, Molecular Biology, 030304 developmental biology, Structure (mathematical logic), 0303 health sciences, Measure (data warehouse), business.industry, Deep learning, 030302 biochemistry & molecular biology, Computational Biology, Proteins, Protein structure prediction, Protein tertiary structure, Artificial intelligence, business, computer, Algorithms, Software
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المؤلفون: Bohdan Monastyrskyy, Juri Rappsilber, Krzysztof Fidelis, J. Eduardo Fajardo, Mikhail Karasikov, Alexander Leitner, Agnieszka S. Karczyńska, Andras Fiser, Adam Belsom, Silvia Crivelli, Emilia A. Lubecka, Celina Sikorska, Andriy Kryshtafovych, Nelson Gil, Cezary Czaplewski, Rojan Shrestha, Esben Trabjerg, Sergei Grudinin, Guillaume Pagès, Adam Liwo, Adam K. Sieradzan
المساهمون: Department of Systems & Computational Biology [New York], Albert Einstein College of Medicine [New York], Department of Biochemistry [New York], Institut für Biotechnologie [berlin], Technische Universität Berlin (TU), Department of Computer Science [Davis] (UC Davis), University of California [Davis] (UC Davis), University of California-University of California, Department of Environmental Analytics [Univ Gdańsk], Faculty of Chemistry [Univ Gdańsk], University of Gdańsk (UG)-University of Gdańsk (UG), Genome Center [UC Davis], Algorithms for Modeling and Simulation of Nanosystems (NANO-D), Inria Grenoble - Rhône-Alpes, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Laboratoire Jean Kuntzmann (LJK ), Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Moscow Institute of Physics and Technology [Moscow] (MIPT), Skolkovo Institute of Science and Technology [Moscow] (Skoltech), Department of Computer Science [ETH Zürich] (D-INFK), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Institute of Molecular Systems Biology [Zurich], Korea Institute for Advanced Study (KIAS), Institute of Mathematics [Univ Gdańsk], University of Gdańsk (UG), Wellcome Trust Centre for Cell Biology, University of Edinburgh, Technical University of Berlin / Technische Universität Berlin (TU), Department of Computer Science [Univ California Davis] (CS - UC Davis), University of California (UC)-University of California (UC), Algorithms for Modeling and Simulating Nanosystems [2018-...] (NANO-D-POST [2018-2020]), Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
المصدر: Proteins-Structure, Function and Bioinformatics
Proteins-Structure, Function and Bioinformatics, Wiley, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1283-1297. ⟨10.1002/prot.25816⟩
Proteins
Proteins-Structure, Function and Bioinformatics, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1283-1297. ⟨10.1002/prot.25816⟩
Fajardo, J E, Shrestha, R, Gil, N, Belsom, A, Crivelli, S N, Czaplewski, C, Fidelis, K, Grudinin, S, Karasikov, M, Karczyńska, A S, Kryshtafovych, A, Leitner, A, Liwo, A, Lubecka, E A, Monastyrskyy, B, Pagès, G, Rappsilber, J, Sieradzan, A K, Sikorska, C, Trabjerg, E & Fiser, A 2019, ' Assessment of chemical-crosslink-assisted protein structure modeling in CASP13 ', Proteins: Structure, Function, and Bioinformatics, vol. 87, no. 12, pp. 1283-1297 . https://doi.org/10.1002/prot.25816مصطلحات موضوعية: CASP13, Models, Molecular, Computer science, Protein Conformation, Context (language use), Computational biology, Routine practice, 010402 general chemistry, Mass spectrometry, Machine learning, computer.software_genre, 01 natural sciences, Biochemistry, Article, [PHYS.PHYS.PHYS-COMP-PH]Physics [physics]/Physics [physics]/Computational Physics [physics.comp-ph], 03 medical and health sciences, Protein structure, chemical-crosslink-assisted protein structure modeling, Structural Biology, Tandem Mass Spectrometry, Molecular Biology, 030304 developmental biology, 0303 health sciences, Chemistry, business.industry, 030302 biochemistry & molecular biology, Model protein, Computational Biology, Proteins, Reproducibility of Results, 0104 chemical sciences, [SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics, Workflow, Cross-Linking Reagents, Models, Chemical, chemical crosslinking/mass spectrometry, Critical assessment, Artificial intelligence, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], business, Protein structure modeling, computer, Function (biology), Algorithms, Chromatography, Liquid
وصف الملف: application/pdf
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