المؤلفون: Nicole C. Thunes, Haitham H. Mohammed, Jason P. Evenhuis, Ryan S. Lipscomb, David Pérez-Pascual, Rebecca J. Stevick, Clayton Birkett, Rachel A. Conrad, Jean-Marc Ghigo, Mark J. McBride

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 13 (2023)

مصطلحات موضوعية: flavobacterium, fish pathogen, gene deletion, type IX secretion system (T9SS), protease, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2023.1093393/full; https://doaj.org/toc/2235-2988

URL الوصول: https://doaj.org/article/1ab1b1671b6f4392af67ef66dcccadd0

المؤلفون: Rachel A. Conrad, Jason P. Evenhuis, Ryan S. Lipscomb, David Pérez-Pascual, Rebecca J. Stevick, Clayton Birkett, Jean-Marc Ghigo, Mark J. McBride

المصدر: Frontiers in Cellular and Infection Microbiology, Vol 12 (2022)

مصطلحات موضوعية: Flavobacterium columnare, virulence, iron acquisition, outer membrane siderophore receptor, heme binding protein, Microbiology, QR1-502

وصف الملف: electronic resource

Relation: https://www.frontiersin.org/articles/10.3389/fcimb.2022.1029833/full; https://doaj.org/toc/2235-2988

URL الوصول: https://doaj.org/article/c12cd9f409104eda852e39c152e53ad3

المؤلفون: Rachel A. Conrad, Jason P. Evenhuis, Ryan S. Lipscomb, David Pérez-Pascual, Rebecca J. Stevick, Clayton Birkett, Jean-Marc Ghigo, Mark J. McBride

المساهمون: University of Wisconsin - Milwaukee, National Center for Cool and Cold Water Aquaculture, ARS-USDA, USDA-ARS : Agricultural Research Service, Génétique des Biofilms - Genetics of Biofilms, Université Paris Cité (UPCité)-Microbiologie Intégrative et Moléculaire (UMR6047), Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM)-Centre National de la Recherche Scientifique (CNRS), This work was funded in part by United States Department of Agriculture-ARS CRIS projects 8082-32000-006-00-D and 5090-31320-004-00D and by cooperative agreements 5090-31320-004-03S and 58-5090-1-022, and by grant NA18OAR4170097, project R/SFA-20 from the University of Wisconsin Sea Grant Institute under grants from the National Sea Grant College Program, National Oceanic and Atmospheric Administration, U.S. Department of Commerce, and the State of Wisconsin. J-MG, D-PP and RS were funded by the French government’s Investissement d’Avenir Program, Laboratoire d’Excellence 'Integrative Biology of Emerging Infectious Diseases' (grant ANR-10-LABX-62-IBEID) and by an Institut Carnot Pasteur MS fellowship., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010)

المصدر: Frontiers in Cellular and Infection Microbiology
Frontiers in Cellular and Infection Microbiology, 2022, 12, pp.1029833. ⟨10.3389/fcimb.2022.1029833⟩

مصطلحات موضوعية: Microbiology (medical), Virulence, Iron, Immunology, outer membrane siderophore receptor, Siderophores, Microbiology, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, Flavobacterium, Flavobacterium columnare, Fish Diseases, Infectious Diseases, Flavobacteriaceae Infections, Oncorhynchus mykiss, Animals, ATP-Binding Cassette Transporters, heme binding protein, Zebrafish, iron acquisition

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a6e806d669b4c26732ee60d0eb5af9d1
https://pubmed.ncbi.nlm.nih.gov/36325469

المؤلفون: Rachel A. Conrad, Jason P. Evenhuis, Ryan S. Lipscomb, Clayton Birkett, Mark J. McBride

المصدر: Appl Environ Microbiol

مصطلحات موضوعية: Ecology, Virulence, Virulence Factors, Iron, Siderophores, Genetics and Molecular Biology, Applied Microbiology and Biotechnology, Flavobacterium, Fish Diseases, Flavobacteriaceae Infections, Oncorhynchus mykiss, Animals, Zebrafish, Food Science, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::410d54a6e6e66be3451459e3b7890759
https://europepmc.org/articles/PMC9469716/

المؤلفون: Clayton Birkett, Jason P. Evenhuis, Ryan Lipscomb

المصدر: Journal of Fish Diseases. 44:533-539

مصطلحات موضوعية: 0301 basic medicine, Veterinary medicine, Veterinary (miscellaneous), Fish species, Virulence, Aquatic Science, Flavobacterium, Fish Diseases, 03 medical and health sciences, Aquaculture, Flavobacteriaceae Infections, Animals, Ovum, biology, Strain (chemistry), business.industry, Significant difference, 04 agricultural and veterinary sciences, biology.organism_classification, Trout, 030104 developmental biology, Animals, Newborn, Larva, Oncorhynchus mykiss, Flavobacterium columnare, 040102 fisheries, 0401 agriculture, forestry, and fisheries, Rainbow trout, business

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c0bf5bb4ffa4f09c7d489b8f9ee85cf7
https://doi.org/10.1111/jfd.13343

المؤلفون: Nan Li, Mark J. McBride, Rachel A. Conrad, Yongtao Zhu, Timothy J. Welch, Nicole C Thunes, Devon H. Erbes, Jean-Marc Ghigo, Clayton Birkett, Ryan Lipscomb, Jason P. Evenhuis, Paul Barbier, Haitham H. Mohammed, Benjamin R. LaFrentz, David Pérez-Pascual, John R Schneider

المصدر: Appl Environ Microbiol

مصطلحات موضوعية: Proteomics, Virulence, Ecology, biology, Gliding motility, Effector, Mutant, Genetics and Molecular Biology, biology.organism_classification, Flavobacterium, Applied Microbiology and Biotechnology, Microbiology, Fish Diseases, Flavobacteriaceae Infections, Flavobacterium columnare, Animals, Secretion, Cytolysin, Gene, Zebrafish, Food Science, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::24b3a46292f5a286a74457de0c609a0f
https://doi.org/10.1128/aem.01705-21

المؤلفون: Travis Moreland, Clayton Birkett, Ryan Lipscomb, Timothy D. Leeds, Jason P. Evenhuis

المصدر: Diseases of Aquatic Organisms. 139:213-221

مصطلحات موضوعية: 0303 health sciences, Reproducibility of Results, 04 agricultural and veterinary sciences, Aquatic Science, Biology, biology.organism_classification, Flavobacterium, Dilution, Fish Diseases, 03 medical and health sciences, Animal science, Flavobacteriaceae Infections, Oncorhynchus mykiss, Flavobacterium columnare, 040102 fisheries, Animals, 0401 agriculture, forestry, and fisheries, Rainbow trout, Low correlation, Ecology, Evolution, Behavior and Systematics, 030304 developmental biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::566569e7393568a6db426e251eacd8f8
https://doi.org/10.3354/dao03487

المؤلفون: Clayton Birkett, Jason P. Evenhuis, Ryan Lipscomb

المصدر: Current microbiology. 78(7)

مصطلحات موضوعية: 0303 health sciences, 030306 microbiology, Biofilm, Virulence, Genomovar, General Medicine, Biology, biology.organism_classification, Applied Microbiology and Biotechnology, Microbiology, Flavobacterium, Yeast, 03 medical and health sciences, chemistry.chemical_compound, Fish Diseases, chemistry, Tryptone, Flavobacteriaceae Infections, Cations, Flavobacterium columnare, Yeast extract, Animals, Pathogen, 030304 developmental biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cc88cb9571093a4962576ecb7a551d72
https://pubmed.ncbi.nlm.nih.gov/33991203

المؤلفون: Guilhem Sempere, Patrick König, Bruno Costa, Jan Erik Backlund, Jack Elendil B. Lagare, Viana C. Calaminos, Jeremy D. Edwards, Gordon Stephen, Omar Eduardo Benites-Alfaro, Pierre Carceller, Martin Basterrechea Salido, David LeBauer, Maikel P. H. Verouden, Guillaume Cornut, Nicolas Morales, Philip Glaser, David Marshall, Evangelia Papoutsoglou, Cyril Pommier, Guillaume Bauchet, Valentin Guignon, Kelly R. Robbins, Iain Milne, David A. Lyon, Pascal Neveu, Brian Pearce, Chaitanya Sarma, Qi Sun, Nahuel Soldevilla, Sebastian Raubach, Peter Selby, Clarysabel Tovar, Grzegorz Uszynski, Rafael Abbeloos, Reinhard Simon, Paul Shaw, Marie-Angélique Laporte, Mathieu Rouard, Star Yanxin Gao, Naymesh Mistry, Puthick Hok, Uwe Scholz, Trevor W. Rife, Ricardo H. Ramirez-Gonzalez, Dave Matthews, Mehmood Ghaffar, Pierre Larmande, Matthias Lange, Andrzej Kilian, Clayton Birkett, Ivan Perez-Masias, Angel Manica Raquel, Abhishek Rathore, Lukas A. Mueller, Richard Finkers

المساهمون: Wren, Jonathan, Flanders Institute for Biotechnology, Leibniz Institute of Plant Genetics and Crop Plant Research [Gatersleben] (IPK-Gatersleben), Boyce Thompson Institute [Ithaca], International Potato Center, USDA-ARS : Agricultural Research Service, International Rice Research Institute [Philippines] (IRRI), Consultative Group on International Agricultural Research [CGIAR] (CGIAR), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Unité de Recherche Génomique Info (URGI), Institut National de la Recherche Agronomique (INRA), Instituto de Biologia Experimental e Tecnológica (IBET), Wageningen University and Research Centre (WUR), Cornell University [New York], CGIAR, Diversity Arrays Technology Pty Ltd (DArT P/L), Institut de Recherche pour le Développement (IRD), University of Arizona, The James Hutton Institute, LeafNode Technology, Partenaires INRAE, Mathématiques, Informatique et STatistique pour l'Environnement et l'Agronomie (MISTEA), Institut National de la Recherche Agronomique (INRA)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), John Innes Centre [Norwich], Biotechnology and Biological Sciences Research Council (BBSRC), International Crops Research Institute for the Semi-Arid Tropics [Inde] (ICRISAT), Kansas State University, Leafnode Technolog, Biometris, Gates Foundation, Bioversity International, Federal Ministry of Education & Research (BMBF) : FKZ 031A536A, 031B0190A, Boyce Thompson Institute for Plant Research CGIAR Research Program on Roots, Tubers and Bananas, Cornell University Excellence in Breeding Platform, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), John Innes Centre

المصدر: Bioinformatics
BIOINFORMATICS
Bioinformatics (Oxford, England) 35 (2019) 20
Bioinformatics, 2019, 35 (20), pp.4147-4155. ⟨10.1093/bioinformatics/btz190⟩
Bioinformatics 20 (35), 4147-4155. (2019)
Bioinformatics (Oxford, England), 35(20), 4147-4155
Bioinformatics, Oxford University Press (OUP), 2019, 35 (20), pp.4147-4155. ⟨10.1093/bioinformatics/btz190⟩

مصطلحات موضوعية: 0106 biological sciences, Germplasm, programme informatique, Computer science, [SDV]Life Sciences [q-bio], Data management, computer.software_genre, 01 natural sciences, Biochemistry, F30 - Génétique et amélioration des plantes, User-Computer Interface, Software, Laboratorium voor Plantenveredeling, [MATH]Mathematics [math], 0303 health sciences, Application programming interface, U10 - Informatique, mathématiques et statistiques, Genomics, Original Papers, Computer Science Applications, Computational Mathematics, Computational Theory and Mathematics, Web service, sélection végétale, Statistics and Probability, Technology and Engineering, Databases and Ontologies, génomique, 03 medical and health sciences, Bioinformatique, application informatique, [SDV.BV]Life Sciences [q-bio]/Vegetal Biology, Life Science, [INFO]Computer Science [cs], Plant breeding, Genotyping, Molecular Biology, 030304 developmental biology, business.industry, Biology and Life Sciences, Amélioration des plantes, Data science, Plant Breeding, business, computer, 010606 plant biology & botany

وصف الملف: application/pdf; text; text/pdf; application/octet-stream

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::feb6ca890a59457f928bbc09063795b9
https://pubmed.ncbi.nlm.nih.gov/30903186

المؤلفون: Christopher J. Mungall, Ethalinda K. S. Cannon, Rex T. Nelson, Pankaj Jaiswal, Daureen Nesdill, Marie-Angélique Laporte, Steven B. Cannon, Margaret R. Woodhouse, James P. Carson, David Grant, Margaret Staton, Jacqueline D. Campbell, Marcela K. Tello-Ruiz, Ramona Walls, Carson M. Andorf, Monica Munoz-Torres, Laurel Cooper, Jill L. Wegrzyn, Victor P. Unda, Sabarinath Subramaniam, Stephen P. Ficklin, Sook Jung, Pierre Larmande, James M. Reecy, Christine G. Elsik, Tanya Z. Berardini, Nathan Dunn, Fiona M. McCarthy, Monica F. Poelchau, Liya Wang, Elizabeth Arnaud, Clement Jonquet, Jodi L. Humann, Nic Herndon, Doreen Ware, Deepak Unni, Emily S. Grau, Leonore Reiser, Clayton Birkett, Doreen Main, Taner Z. Sen, Zhi-Liang Hu, Jing Yu, Gerard R. Lazo, Jason Williams, Carissa A. Park, Bradford Condon, Lacey-Anne Sanderson, Lisa C. Harper, Naama Menda, Andrew Farmer, Sushma Naithani

المساهمون: Dept Hort & Landscape Architecture, Washington State University (WSU), Georgetown University [Washington] (GU), Department of Botany and Plant Pathology, Oregon State University (OSU), University of Missouri [Columbia] (Mizzou), University of Missouri System, Energy and Sustainability Research Division, University of Nottingham, UK (UON), Department of Animal Science and Center for Integrated Animal Genomics, Iowa State University (ISU), Plastes et différenciation cellulaire (PDC), Université Joseph Fourier - Grenoble 1 (UJF)-Centre National de la Recherche Scientifique (CNRS), WEB-CUBE, Laboratoire d'Informatique de Robotique et de Microélectronique de Montpellier (LIRMM), Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM), Stanford School of Medicine [Stanford], Stanford Medicine, Stanford University-Stanford University, German Centre for Integrative Biodiversity Research, Diversité, adaptation, développement des plantes (UMR DIADE), Institut de Recherche pour le Développement (IRD [France-Sud])-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Lawrence Berkeley National Laboratory [Berkeley] (LBNL), Department of Animal Science, Department of Entomology and Plant Pathology, The University of Tennessee [Knoxville], Department of Anatomy, Cold Spring Harbor Laboratory, Novartis Institutes for BioMedical Research (NIBR), WEB Architecture x Semantic WEB x WEB of Data (WEB3), Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])

المصدر: Database : the journal of biological databases and curation, vol 2018, iss 2018
Harper, L; Campbell, J; Cannon, EKS; Jung, S; Poelchau, M; Walls, R; et al.(2018). AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database, 2018(2018). doi: 10.1093/database/bay088. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/1g85955j
Database-Weston
Database-Weston-, Online Inc., 2018, 2018, pp.#bay088. ⟨10.1093/database/bay088⟩
Database-Weston-, 2018, 2018, pp.#bay088. ⟨10.1093/database/bay088⟩

مصطلحات موضوعية: [SDV.SA]Life Sciences [q-bio]/Agricultural sciences, 0301 basic medicine, Computer science, Best practice, Data management, Interoperability, Biological database, Breeding, computer.software_genre, General Biochemistry, Genetics and Molecular Biology, 03 medical and health sciences, Databases, 0302 clinical medicine, Genetic, Library and Information Studies, Surveys and Questionnaires, Databases, Genetic, 2. Zero hunger, Biological data, Metadata, [INFO.INFO-DB]Computer Science [cs]/Databases [cs.DB], Data curation, Database, business.industry, [INFO.INFO-WB]Computer Science [cs]/Web, Agriculture, Genomics, Data Format, [INFO.INFO-TT]Computer Science [cs]/Document and Text Processing, 030104 developmental biology, Data access, Gene Ontology, [INFO.INFO-IR]Computer Science [cs]/Information Retrieval [cs.IR], Zero Hunger, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], General Agricultural and Biological Sciences, business, computer, 030217 neurology & neurosurgery, Information Systems

وصف الملف: application/pdf; text/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f08dbfdbf88436e21230f13ab6584c5e
https://escholarship.org/uc/item/1g85955j