المؤلفون: Keshet Ronen, Connor O McCoy, Frederick A Matsen, David F Boyd, Sandra Emery, Katherine Odem-Davis, Walter Jaoko, Kishor Mandaliya, R Scott McClelland, Barbra A Richardson, Julie Overbaugh

المصدر: PLoS Pathogens, Vol 9, Iss 8, p e1003593 (2013)

مصطلحات موضوعية: Immunologic diseases. Allergy, RC581-607, Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24009513/?tool=EBI; https://doaj.org/toc/1553-7366; https://doaj.org/toc/1553-7374

URL الوصول: https://doaj.org/article/f48682b443f04e6b86c8c288aee20b86

المؤلفون: Sujatha Srinivasan, Noah G Hoffman, Martin T Morgan, Frederick A Matsen, Tina L Fiedler, Robert W Hall, Frederick J Ross, Connor O McCoy, Roger Bumgarner, Jeanne M Marrazzo, David N Fredricks

المصدر: PLoS ONE, Vol 7, Iss 6, p e37818 (2012)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC3377712?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/f8b4659700454556a01e175d1cc6d261

المؤلفون: Connie Celum, Connor O. McCoy, Nelly Mugo, Julie F. Weis, Craig W. Hendrix, Mark A. Marzinke, Frederick A. Matsen, Jared M. Baeten, Deborah Donnell, Chris Warth, Katherine K. Thomas, Dara A. Lehman

المصدر: AIDS. 30:31-35

مصطلحات موضوعية: 0301 basic medicine, Drug, medicine.medical_specialty, media_common.quotation_subject, Immunology, Drug resistance, Emtricitabine, law.invention, 03 medical and health sciences, Pre-exposure prophylaxis, 0302 clinical medicine, Randomized controlled trial, law, Internal medicine, Immunology and Allergy, Medicine, 030212 general & internal medicine, Seroconversion, media_common, business.industry, Clinical trial, 030104 developmental biology, Infectious Diseases, business, HIV drug resistance, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::dcf6b8844ca2349b1e95ee7bac2204f9
https://doi.org/10.1097/qad.0000000000000915

المؤلفون: Vu Dinh, Brian C. Claywell, Frederick A. Matsen, Connor O. McCoy, Mathieu Fourment

مصطلحات موضوعية: 0301 basic medicine, Bayesian probability, Binary number, Biology, Evolution, Molecular, 03 medical and health sciences, Phylogenetics, Genetics, Methods, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Phylogeny, Evolutionary Biology, Likelihood Functions, Phylogenetic tree, Models, Genetic, Sampling (statistics), Bayes Theorem, Sequence Analysis, DNA, Markov Chains, Data set, 030104 developmental biology, ComputingMethodologies_PATTERNRECOGNITION, Substitution model, Likelihood function, Algorithm, Monte Carlo Method, Algorithms

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d6455450e177e571573b93da21cc4f65
https://europepmc.org/articles/PMC5850616/

المؤلفون: Aaron E. Darling, Vu Dinh, Brian C. Claywell, Connor O. McCoy, Mathieu Fourment, Frederick A. Matsen

المصدر: Systematic Biology

مصطلحات موضوعية: 0301 basic medicine, Computer science, Bayesian probability, Monte Carlo method, Posterior probability, Bayesian inference, Inference, Biology, sequential Monte Carlo, Machine learning, computer.software_genre, 01 natural sciences, Models, Biological, 010104 statistics & probability, 03 medical and health sciences, Bayes' theorem, symbols.namesake, online inference, Prior probability, Genetics, Statistical inference, 0101 mathematics, Ecology, Evolution, Behavior and Systematics, Phylogeny, 030304 developmental biology, Evolutionary Biology, 0303 health sciences, Internet, business.industry, Markov chain Monte Carlo, Bayes Theorem, Classification, Bayesian statistics, phylogenetics, 030104 developmental biology, ComputingMethodologies_PATTERNRECOGNITION, symbols, Data mining, Artificial intelligence, Particle filter, business, computer, Monte Carlo Method, Algorithms, Regular Articles

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::245f16004a3b0f94ffe2f02c19524012
https://hdl.handle.net/10453/155833

المؤلفون: Connor O. McCoy, Aaron Gallagher, Frederick A. Matsen

المصدر: Systematic Biology. 62:824-836

مصطلحات موضوعية: FOS: Computer and information sciences, 0106 biological sciences, Discrete Mathematics (cs.DM), Heuristic (computer science), 010603 evolutionary biology, 01 natural sciences, Combinatorics, Set (abstract data type), 03 medical and health sciences, Enterobacteriaceae, Genetics, Quantitative Biology - Populations and Evolution, Greedy algorithm, Phylogeny, Ecology, Evolution, Behavior and Systematics, 030304 developmental biology, Mathematics, 0303 health sciences, Sequence, Phylogenetic tree, Populations and Evolution (q-bio.PE), Reproducibility of Results, Maximization, Classification, Medoid, Exact algorithm, FOS: Biological sciences, Algorithm, Algorithms, Regular Articles, Computer Science - Discrete Mathematics

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::58b7e3ebf75076d9d77e14133a9319fb
https://doi.org/10.1093/sysbio/syt044

المؤلفون: Agnes Langat, Sarah Benki-Nugent, Frederick A. Matsen, Frederic D. Bushman, Rebecca Custers-Allen, Bhavna Chohan, Dalton Wamalwa, Connor O. McCoy, Dara A. Lehman, Julie Overbaugh, Grace John-Stewart

المصدر: JAIDS Journal of Acquired Immune Deficiency Syndromes. 60:225-233

مصطلحات موضوعية: Oncology, medicine.medical_specialty, Nevirapine, Anti-HIV Agents, HIV Infections, medicine.disease_cause, Article, Treatment failure, Pregnancy, immune system diseases, Antiretroviral Therapy, Highly Active, Internal medicine, Drug Resistance, Viral, Humans, Medicine, Pharmacology (medical), Treatment Failure, Mutation, business.industry, Infant, virus diseases, medicine.disease, Kenya, Virology, HIV Reverse Transcriptase, Infectious Disease Transmission, Vertical, Confidence interval, Reverse transcriptase, VIROLOGIC FAILURE, Infectious Diseases, Increased risk, Amino Acid Substitution, Child, Preschool, HIV-1, Female, business, medicine.drug

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::971207c5fe993942c74c3d36a1821456
https://doi.org/10.1097/qai.0b013e3182515730

المؤلفون: Vladimir N. Minin, Frederick A. Matsen, Connor O. McCoy, Harlan Robins, Trevor Bedford, Philip Bradley

المصدر: Philosophical Transactions of the Royal Society B: Biological Sciences
McCoy, CO; Bedford, T; Minin, VN; Bradley, P; Robins, H; & Matsen, FA. (2015). Quantifying evolutionary constraints on B-cell affinity maturation. Philosophical Transactions of the Royal Society B: Biological Sciences, 370(1676). doi: 10.1098/rstb.2014.0244. UC Irvine: Retrieved from: http://www.escholarship.org/uc/item/3tk6h3km
McCoy, CO; Bedford, T; Minin, VN; Bradley, P; Robins, H; & IV, FAM. (2018). Quantifying evolutionary constraints on B cell affinity maturation. UC Irvine: Retrieved from: http://www.escholarship.org/uc/item/17r867gf

مصطلحات موضوعية: q-bio.PE, Receptors, Antigen, B-Cell, Computational biology, Biology, General Biochemistry, Genetics and Molecular Biology, Evolution, Molecular, 03 medical and health sciences, Bayes' theorem, 0302 clinical medicine, Molecular evolution, antibody, Humans, Computer Simulation, 10. No inequality, Quantitative Biology - Populations and Evolution, Clonal Selection, Antigen-Mediated, Selection (genetic algorithm), 030304 developmental biology, Genetics, affinity maturation, 0303 health sciences, B-Lymphocytes, Stochastic Processes, B cell, Natural selection, Models, Genetic, Stochastic process, molecular evolution, Populations and Evolution (q-bio.PE), Models, Immunological, High-Throughput Nucleotide Sequencing, Antibody Diversity, Bayes Theorem, Cell Differentiation, natural selection, Articles, Process substitution, V(D)J Recombination, FOS: Biological sciences, Mutation (genetic algorithm), General Agricultural and Biological Sciences, immunoglobulin, 030215 immunology, Research Article

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e14b87221fca777f4e42c778d8099488
https://pubmed.ncbi.nlm.nih.gov/26194758

المؤلفون: Allan C. deCamp, Merlin L. Robb, Sodsai Tovanabutra, Miguel A. Arroyo, Connor O. McCoy, Andrew J. Gartland, Raphael Gottardo, Sergei L. Kosakovsky Pond, Konrad Scheffler, Paul T. Edlefsen, Tomer Hertz, Meera Bose, Michal Juraska, William R. Schief, Tatsiana Kirys, Robert J. O'Connell, Jerome H. Kim, Rv Sequencing Team, Ivelin S. Georgiev, Nelson L. Michael, Punnee Pitisuttithum, Jaranit Kaewkungwal, Peter D. Kwong, Sorachai Nitayaphan, Chris Carrico, Jonathan M. Carlson, Supachai Rerks-Ngarm, Peter B. Gilbert, James I. Mullins, Hasan Ahmed, Craig A. Magaret, Eric Sanders-Buell, Brendan B. Larsen, Morgane Rolland, Sergey Menis

المساهمون: Peters, Bjoern

المصدر: PLoS Computational Biology, Vol 11, Iss 2, p e1003973 (2015)
PLoS Computational Biology
PLoS computational biology, vol 11, iss 2

مصطلحات موضوعية: Human Immunodeficiency Virus Proteins, Human immunodeficiency virus (HIV), Sieve analysis, HIV Infections, medicine.disease_cause, Genome, Mathematical Sciences, Neutralization, Models, Medicine, Viral, lcsh:QH301-705.5, AIDS Vaccines, Ecology, Viral Vaccine, Biological Sciences, Infectious Diseases, Computational Theory and Mathematics, Modeling and Simulation, HIV/AIDS, Antibody, Infection, Sequence Analysis, Biotechnology, Research Article, Bioinformatics, Sequence analysis, Clinical Trials and Supportive Activities, Immunology, Molecular Sequence Data, Biology, Vaccine Related, Cellular and Molecular Neuroscience, Antigen, Clinical Research, Virology, Information and Computing Sciences, Genetics, Humans, Vaccine Related (AIDS), Molecular Biology, Ecology, Evolution, Behavior and Systematics, Binding Sites, business.industry, Prevention, Protein, Molecular, Breakthrough infection, Vaccine efficacy, Good Health and Well Being, lcsh:Biology (General), HIV-1, biology.protein, Immunization, business, RV144 Sequencing Team, Sequence Alignment

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::edb695a8b775ad76de88a8a88828fee1
http://europepmc.org/articles/PMC4315437?pdf=render

المؤلفون: Jutta Fero, Nina R. Salama, Brian C. Claywell, Alevtina A. Gall, Xiaohong Li, Thomas L. Vaughan, Brian J. Reid, Carissa A. Sanchez, Connor O. McCoy, Frederick A. Matsen, Patricia L. Blount

المصدر: PLoS ONE, Vol 10, Iss 6, p e0129055 (2015)
PLoS ONE

مصطلحات موضوعية: Male, Pathology, Esophageal Neoplasms, lcsh:Medicine, Gastroenterology, Upper Gastrointestinal Tract, Risk Factors, lcsh:Science, Antrum, Phylogeny, Aged, 80 and over, Multidisciplinary, biology, Microvilli, Stomach, Incidence, Microbiota, Biodiversity, Middle Aged, 3. Good health, medicine.anatomical_structure, Cohort, Adenocarcinoma, Female, Disease Susceptibility, Research Article, medicine.medical_specialty, Genomic Instability, Hiatal hernia, Barrett Esophagus, Quantitative Trait, Heritable, Internal medicine, medicine, Humans, Esophagus, Aged, Mucous Membrane, Bacteria, Waist-Hip Ratio, lcsh:R, Helicobacter pylori, medicine.disease, biology.organism_classification, digestive system diseases, Gastric Mucosa, Barrett's esophagus, Metagenome, lcsh:Q

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ba7a16c61d614544b1bc375a74371d06
http://europepmc.org/articles/PMC4468150?pdf=render