المؤلفون: Dalldorf C; Department of Bioengineering, University of California San Diego, La Jolla, USA., Rychel K; Department of Bioengineering, University of California San Diego, La Jolla, USA., Szubin R; Department of Bioengineering, University of California San Diego, La Jolla, USA., Hefner Y; Department of Bioengineering, University of California San Diego, La Jolla, USA., Patel A; Department of Bioengineering, University of California San Diego, La Jolla, USA., Zielinski DC; Department of Bioengineering, University of California San Diego, La Jolla, USA., Palsson BO; Department of Bioengineering, University of California San Diego, La Jolla, USA.; Bioinformatics and Systems Biology Program, University of California San Diego, La Jolla, USA.; Department of Pediatrics, University of California San Diego, La Jolla, California, USA.; Center for Microbiome Innovation, University of California San Diego, La Jolla, California, USA.; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.

المصدر: MSystems [mSystems] 2024 Jul 23; Vol. 9 (7), pp. e0030524. Date of Electronic Publication: 2024 Jun 03.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5077 (Electronic) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: MEDLINE

مواضيع طبية MeSH: Transcriptome* , Escherichia coli*/genetics , DNA-Directed RNA Polymerases*/genetics , DNA-Directed RNA Polymerases*/metabolism , Mutation* , Stress, Physiological*/genetics, Gene Expression Regulation, Bacterial ; Escherichia coli Proteins/genetics ; Escherichia coli Proteins/metabolism ; Sigma Factor/genetics ; Sigma Factor/metabolism ; Adaptation, Physiological/genetics

المؤلفون: Schaffter SW; Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Kengmana E; Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Fern J; Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Byrne SR; Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States., Schulman R; Department of Chemical & Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States.; Department of Chemistry, Johns Hopkins University, Baltimore, Maryland 21218, United States.; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland 21218, United States.

المصدر: ACS synthetic biology [ACS Synth Biol] 2024 Jul 19; Vol. 13 (7), pp. 1964-1977. Date of Electronic Publication: 2024 Jun 17.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101575075 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2161-5063 (Electronic) Linking ISSN: 21615063 NLM ISO Abbreviation: ACS Synth Biol Subsets: MEDLINE

مواضيع طبية MeSH: DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/genetics , Promoter Regions, Genetic* , Transcription, Genetic* , Viral Proteins*/metabolism , Viral Proteins*/genetics , Nanostructures*/chemistry , DNA*/metabolism , DNA*/genetics , DNA*/chemistry, DNA, Single-Stranded/genetics ; DNA, Single-Stranded/metabolism ; DNA, Single-Stranded/chemistry ; Nanotechnology/methods ; Bacteriophage T7/genetics

المؤلفون: Yagi S; RIKEN Center for Biosystems Dynamics Research, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan. sota.yagi@aoni.waseda.jp.; Faculty of Human Sciences, Waseda University, 2-579-15, Mikajima, Tokorozawa, Saitama, 359-1192, Japan. sota.yagi@aoni.waseda.jp., Tagami S; RIKEN Center for Biosystems Dynamics Research, 1-7-22 Suehiro-cho, Tsurumi-ku, Yokohama, Kanagawa, 230-0045, Japan. shunsuke.tagami@riken.jp.; Graduate School of Medicine, Science and Technology, Shinshu University, 3-1-1 Asahi, Matsumoto City, Nagano, 390-8621, Japan. shunsuke.tagami@riken.jp.; International Institute for Sustainability with Knotted Chiral Meta Matter (WPI-SKCM²), Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima, 739-8526, Japan. shunsuke.tagami@riken.jp.

المصدر: Nature communications [Nat Commun] 2024 Jul 18; Vol. 15 (1), pp. 5938. Date of Electronic Publication: 2024 Jul 18.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Evolution, Molecular* , Ribosomal Proteins*/metabolism , Ribosomal Proteins*/chemistry , Ribosomal Proteins*/genetics , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/genetics , DNA-Directed RNA Polymerases*/chemistry , Models, Molecular*, Protein Folding ; Amino Acid Sequence

المؤلفون: Nova IC; Department of Physics, University of Washington, Seattle, WA 98195., Craig JM; Department of Physics, University of Washington, Seattle, WA 98195., Mazumder A; Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854., Laszlo AH; Department of Physics, University of Washington, Seattle, WA 98195., Derrington IM; Department of Physics, University of Washington, Seattle, WA 98195., Noakes MT; Department of Physics, University of Washington, Seattle, WA 98195., Brinkerhoff H; Department of Physics, University of Washington, Seattle, WA 98195., Yang S; Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854., Vahedian-Movahed H; Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854., Li L; Key Laboratory of Synthetic Biology, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China., Zhang Y; Key Laboratory of Synthetic Biology, Chinese Academy of Sciences Center for Excellence in Molecular Plant Sciences, Shanghai Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China., Bowman JL; Department of Physics, University of Washington, Seattle, WA 98195., Huang JR; Department of Physics, University of Washington, Seattle, WA 98195., Mount JW; Department of Physics, University of Washington, Seattle, WA 98195., Ebright RH; Department of Chemistry and Chemical Biology, Rutgers University, Piscataway, NJ 08854., Gundlach JH; Department of Physics, University of Washington, Seattle, WA 98195.

المصدر: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2024 Jul 16; Vol. 121 (29), pp. e2321017121. Date of Electronic Publication: 2024 Jul 11.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

مواضيع طبية MeSH: DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/chemistry , DNA-Directed RNA Polymerases*/genetics , Escherichia coli*/metabolism , Escherichia coli*/genetics , Nanopores*, Transcription, Genetic ; Escherichia coli Proteins/metabolism ; Escherichia coli Proteins/genetics ; Escherichia coli Proteins/chemistry ; Optical Tweezers ; Kinetics ; Nucleotides/metabolism

المؤلفون: Brahmachari S; Center for Theoretical Biological Physics, Rice University, Houston, TX 77005., Tripathi S; PhD Program in Systems, Synthetic, and Physical Biology, Rice University, Houston, TX 77005., Onuchic JN; Center for Theoretical Biological Physics, Rice University, Houston, TX 77005.; Department of Physics and Astronomy, Rice University, Houston, TX 77005.; Department of Chemistry, Rice University, Houston, TX 77005.; Department of Biosciences, Rice University, Houston, TX 77005., Levine H; Center for Theoretical Biological Physics, Northeastern University, Boston, MA 02115.; Department of Physics, Northeastern University, Boston, MA 02115.

المصدر: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2024 Jul 09; Vol. 121 (28), pp. e2319772121. Date of Electronic Publication: 2024 Jul 05.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

مواضيع طبية MeSH: Nucleosomes*/metabolism , Nucleosomes*/genetics , Transcription, Genetic* , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/genetics, DNA/metabolism ; DNA/chemistry ; DNA/genetics ; Chromatin/metabolism ; Chromatin/genetics ; DNA, Superhelical/metabolism ; DNA, Superhelical/chemistry ; DNA, Superhelical/genetics ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae/metabolism

المؤلفون: Humphrey ED; Department of Chemistry and Biochemistry, Lamar University, Beaumont, Texas 77710, United States., Sukhodolets MV; Department of Chemistry and Biochemistry, Lamar University, Beaumont, Texas 77710, United States.

المصدر: Biochemistry [Biochemistry] 2024 Jul 02; Vol. 63 (13), pp. 1647-1662. Date of Electronic Publication: 2024 Jun 13.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370623 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-4995 (Electronic) Linking ISSN: 00062960 NLM ISO Abbreviation: Biochemistry Subsets: MEDLINE

مواضيع طبية MeSH: Escherichia coli Proteins*/chemistry , Escherichia coli Proteins*/metabolism , Escherichia coli Proteins*/genetics , Escherichia coli Proteins*/isolation & purification , Escherichia coli*/genetics , Escherichia coli*/metabolism , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/chemistry , DNA-Directed RNA Polymerases*/genetics , Transcription, Genetic*, Host Factor 1 Protein/metabolism ; Host Factor 1 Protein/chemistry ; Host Factor 1 Protein/genetics ; Protein Biosynthesis ; Multiprotein Complexes/chemistry ; Multiprotein Complexes/genetics ; Multiprotein Complexes/isolation & purification ; Multiprotein Complexes/metabolism

المؤلفون: Hustmyer CM; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA., Landick R; Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.; Department of Bacteriology, University of Wisconsin-Madison, Madison, Wisconsin, USA.

المصدر: Molecular microbiology [Mol Microbiol] 2024 Jul; Vol. 122 (1), pp. 81-112. Date of Electronic Publication: 2024 Jun 07.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Blackwell Scientific Publications Country of Publication: England NLM ID: 8712028 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1365-2958 (Electronic) Linking ISSN: 0950382X NLM ISO Abbreviation: Mol Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Transcription, Genetic* , Gene Expression Regulation, Bacterial* , DNA, Bacterial*/metabolism , DNA, Bacterial*/genetics , Bacterial Proteins*/metabolism , Bacterial Proteins*/genetics , Chromatin*/metabolism , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/genetics, DNA, Superhelical/metabolism ; DNA, Superhelical/genetics ; DNA-Binding Proteins/metabolism ; DNA-Binding Proteins/genetics ; Bacteria/metabolism ; Bacteria/genetics ; Chromosomes, Bacterial/metabolism ; Chromosomes, Bacterial/genetics

المؤلفون: Huan MJ; Department of Ophthalmology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.; The Affiliated Eye Hospital, Nanjing Medical University, Nanjing, 210029, China., Fu PP; Department of Ophthalmology, Shanghai Eye Diseases Prevention & Treatment Center, Shanghai Eye Hospital, School of Medicine, Tongji University, Shanghai, China., Chen X; Department of Anesthesiology, Children's hospital of Soochow University, Suzhou, 215025, China., Wang ZX; Department of Endocrinology, Fengcheng Hospital of Fengxian Distric, Shanghai, China., Ma ZR; Department of Burn and Plastic Surgery, Children's Hospital of Soochow University, Suzhou, China., Cai SZ; Department of Child and Adolescent Healthcare, Children's Hospital of Soochow University, Suzhou, China. sz_cai@suda.edu.cn.; Key Laboratory of Congenital Structural Malformations of Suzhou City, Suzhou, China. sz_cai@suda.edu.cn., Jiang Q; The Affiliated Eye Hospital, Nanjing Medical University, Nanjing, 210029, China. Jqin710@vip.sina.com., Wang Q; Department of Anesthesiology, Children's hospital of Soochow University, Suzhou, 215025, China. q_wang0302@suda.edu.cn.

المصدر: Cell communication and signaling : CCS [Cell Commun Signal] 2024 Jun 21; Vol. 22 (1), pp. 343. Date of Electronic Publication: 2024 Jun 21.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 101170464 Publication Model: Electronic Cited Medium: Internet ISSN: 1478-811X (Electronic) Linking ISSN: 1478811X NLM ISO Abbreviation: Cell Commun Signal Subsets: MEDLINE

مواضيع طبية MeSH: Human Umbilical Vein Endothelial Cells* , Mitochondria*/metabolism , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/genetics, Humans ; Animals ; Mice ; Diabetic Retinopathy/pathology ; Diabetic Retinopathy/metabolism ; Diabetic Retinopathy/genetics ; Mice, Inbred C57BL ; Cell Proliferation ; Neovascularization, Pathologic/genetics ; Neovascularization, Pathologic/metabolism ; Male ; Neovascularization, Physiologic/genetics ; Cell Movement ; Apoptosis ; Angiogenesis

المؤلفون: Watanabe S; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Nsofor CA; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.; Department of Biotechnology, School of Biological Sciences, Federal University of Technology Owerri Nigeria, Owerri, Nigeria., Thitiananpakorn K; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Tan X-E; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Aiba Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Takenouchi R; School of Medicine, Jichi Medical University, Tochigi, Japan., Kiga K; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.; Research Center for Drug and Vaccine Development, National Institute of Infectious Diseases, Tokyo, Japan., Sasahara T; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Miyanaga K; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Veeranarayanan S; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Shimamori Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Lian AYS; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Nguyen TM; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Nguyen HM; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Alessa O; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Kumwenda GP; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Jayathilake S; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Revilleza JEC; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Baranwal P; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Nishikawa Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Li F-Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Kawaguchi T; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Sankaranarayanan S; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Arbaah M; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Zhang Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Maniruzzaman; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Liu Y; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Sarah H; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Li J; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Sugano T; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Ho TMD; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Batbold A; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Nayanjin T; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan., Cui L; Division of Bacteriology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.

المصدر: MBio [mBio] 2024 Jun 12; Vol. 15 (6), pp. e0033924. Date of Electronic Publication: 2024 May 02.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101519231 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2150-7511 (Electronic) NLM ISO Abbreviation: mBio Subsets: MEDLINE

مواضيع طبية MeSH: Methicillin-Resistant Staphylococcus aureus*/genetics , Methicillin-Resistant Staphylococcus aureus*/drug effects , Methicillin-Resistant Staphylococcus aureus*/enzymology , Oxacillin*/pharmacology , DNA-Directed RNA Polymerases*/genetics , DNA-Directed RNA Polymerases*/metabolism , Anti-Bacterial Agents*/pharmacology , Microbial Sensitivity Tests*, beta-Lactams/pharmacology ; Bacterial Proteins/genetics ; Bacterial Proteins/metabolism ; Mutation, Missense ; Cell Wall/drug effects ; Cell Wall/metabolism ; Cell Wall/genetics ; Humans ; Mutation ; Metabolomics

المؤلفون: Tarău D; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, University of Regensburg, 93053 Regensburg, Germany., Grünberger F; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, University of Regensburg, 93053 Regensburg, Germany., Pilsl M; Regensburg Center for Biochemistry (RCB), Structural Biochemistry Group, University of Regensburg, Regensburg, Germany., Reichelt R; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, University of Regensburg, 93053 Regensburg, Germany., Heiß F; Regensburg Center for Biochemistry (RCB), Structural Biochemistry Group, University of Regensburg, Regensburg, Germany., König S; Bioanalytic Mass Spectrometry, Max Planck Institute for Multidisciplinary Sciences, 37077 Göttingen, Germany., Urlaub H; Bioanalytic Mass Spectrometry, Max Planck Institute for Multidisciplinary Sciences, 37077 Göttingen, Germany.; Department of Clinical Chemistry, University Medical Center Göttingen, 37075 Göttingen, Germany., Hausner W; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, University of Regensburg, 93053 Regensburg, Germany., Engel C; Regensburg Center for Biochemistry (RCB), Structural Biochemistry Group, University of Regensburg, Regensburg, Germany., Grohmann D; Institute of Microbiology & Archaea Centre, Single-Molecule Biochemistry Lab, University of Regensburg, 93053 Regensburg, Germany.; Regensburg Center for Biochemistry (RCB), University of Regensburg, 93053 Regensburg, Germany.

المصدر: Nucleic acids research [Nucleic Acids Res] 2024 Jun 10; Vol. 52 (10), pp. 6017-6035.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Archaeal Proteins*/chemistry , Archaeal Proteins*/metabolism , Archaeal Proteins*/genetics , DNA-Directed RNA Polymerases*/metabolism , DNA-Directed RNA Polymerases*/chemistry , DNA-Directed RNA Polymerases*/genetics , Models, Molecular* , Transcription Elongation, Genetic* , Transcriptional Elongation Factors*/metabolism , Transcriptional Elongation Factors*/chemistry , Transcriptional Elongation Factors*/genetics, Chromosomal Proteins, Non-Histone/chemistry ; Chromosomal Proteins, Non-Histone/genetics ; Chromosomal Proteins, Non-Histone/metabolism ; Cryoelectron Microscopy ; Protein Binding ; Pyrococcus furiosus/enzymology ; Pyrococcus furiosus/genetics