المؤلفون: Karla Frydenvang, Marlies C A Verkade-Vreeker, Floor Dohmen, Jan N M Commandeur, Maria Rafiq, Osman Mirza, Flemming Steen Jørgensen, Daan P Geerke

المصدر: PLoS ONE, Vol 14, Iss 5, p e0217292 (2019)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/4ca0b68792244c2ca63e3d37d9ec192e

المؤلفون: Luigi Capoferri, Marlies C A Verkade-Vreeker, Danny Buitenhuis, Jan N M Commandeur, Manuel Pastor, Nico P E Vermeulen, Daan P Geerke

المصدر: PLoS ONE, Vol 10, Iss 11, p e0142232 (2015)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4638363?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/3ed89fa3fa634a258200e17253a8f53b

المؤلفون: Stephanie Maiwald, Suthesh Sivapalaratnam, Mahdi M Motazacker, Julian C van Capelleveen, Ilze Bot, Saskia C de Jager, Miranda van Eck, Jennifer Jolley, Johan Kuiper, Jonathon Stephens, Cornelius A Albers, C Ruben Vosmeer, Heleen Kruize, Daan P Geerke, Allard C van der Wal, Chris M van der Loos, John J P Kastelein, Mieke D Trip, Willem H Ouwehand, Geesje M Dallinga-Thie, G Kees Hovingh

المصدر: PLoS ONE, Vol 9, Iss 5, p e98289 (2014)

مصطلحات موضوعية: Medicine, Science

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4039470?pdf=render; https://doaj.org/toc/1932-6203

URL الوصول: https://doaj.org/article/d0ef6506d4f4491a80ea2afb192bac40

المؤلفون: Evan E. Bolton, Haralambos Sarimveis, Egon L. Willighagen, Hervé Ménager, Susanna-Assunta Sansone, Nina Jeliazkova, Antony J. Williams, Sirarat Sarntivijai, Emma L. Schymanski, Rob Stierum, Karel Berka, Pascal Kahlem, Jos Bessems, Pavel Babica, Montserrat Cases, Ludek Blaha, Hristo Aladjov, Reza Aalizadeh, Karine Audouze, Kasia Arturi, Alasdair Gray, Roland Grafström, Daan P. Geerke, Henner Hollert, Ola Spjuth, John M. Hancock, Kirtan Dave, Dimitrios Ε. Damalas, Thomas Exner, Marco Dilger, Boï Kone, Todor Kondic, Uko Maran, Steffen Neumann, Iseult Lynch, Fabien Jourdan, Philippe Rocca-Serra, Ferran Sanz, Danyel Jennen, Jos Kleinjans, Jana Klanova, Reza M. Salek, Sylvie Remy, Tobias Schulze, Brett Sallach, Penny Nymark, Sergio Martinez Cuesta, Noelia Ramirez, Herbert Oberacher, Craig E. Wheelock, Gerard J.P. van Westen, Barbara Zdrazil, Hilda Witters, Jonathan Tedds, Marvin Martens, Jaroslav Slobodnik, Ralf J.M. Weber, Nikolaos Thomaidis, Anže Županič, Chris T. Evelo

المصدر: F1000Research, Vol 10 (2023)

مصطلحات موضوعية: Toxicology, ELIXIR, interoperability, FAIR, eng, Medicine, Science

وصف الملف: electronic resource

Relation: https://f1000research.com/articles/10-1129/v2; https://doaj.org/toc/2046-1402

URL الوصول: https://doaj.org/article/e59322df245a4fc28be0854e2252ef78

المؤلفون: Minglong Liu, Ryoji Yoshisada, Avand Amedi, Antonius J. P. Hopstaken, Mirte N. Pascha, Cornelis A. M. de Haan, Daan P. Geerke, David A. Poole, Seino A. K. Jongkees

المساهمون: AIMMS, Chemistry and Pharmaceutical Sciences, Molecular and Computational Toxicology

المصدر: Liu, M, Yoshisada, R, Amedi, A, Hopstaken, A J P, Pascha, M N, de Haan, C A M, Geerke, D P, Poole, D A & Jongkees, S A K 2023, ' An Efficient, Site-Selective and Spontaneous Peptide Macrocyclisation During in vitro Translation ', Chemistry-A European Journal, vol. 29, no. 14, e202203923, pp. 1-9 . https://doi.org/10.1002/chem.202203923
Chemistry-A European Journal, 29(14):e202203923, 1-9. Wiley-VCH Verlag

مصطلحات موضوعية: in vitro translation, Organic Chemistry, macrocyclisation, peptides, chemoselective reactions, General Chemistry, cysteine, Catalysis

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::906dac99d3a93a557f6fa16dc2ff109f
https://research.vu.nl/en/publications/1737dd4e-b9eb-4144-8ca7-6920dbf5f53f

المؤلفون: Ida de Vries, Danique Ammerlaan, Tatjana Heidebrecht, Patrick H. N. Celie, Daan P. Geerke, Robbie P. Joosten, Anastassis Perrakis

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::0b4785f11a61fea515b902704d2b573e
https://doi.org/10.1101/2023.01.23.525147

المؤلفون: Felix M. Paulussen, Gina K. Schouten, Carolin Moertl, Jolanda Verheul, Irma Hoekstra, Gregory M. Koningstein, George H. Hutchins, Aslihan Alkir, Rosa A. Luirink, Daan P. Geerke, Peter van Ulsen, Tanneke den Blaauwen, Joen Luirink, Tom N. Grossmann

المصدر: Journal of the American Chemical Society. 144(33)

مصطلحات موضوعية: Colloid and Surface Chemistry, Bacterial Proteins, Escherichia coli Proteins, Escherichia coli, Animals, Membrane Proteins, Cell Cycle Proteins, General Chemistry, Biochemistry, Catalysis, Zebrafish, Anti-Bacterial Agents

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e3c685c7ec6cad6f37fb845aeb2ae85
https://pubmed.ncbi.nlm.nih.gov/35945166

المؤلفون: Thomas Hansen, Xiaobo Sun, Marco Dalla Tiezza, Willem‐Jan van Zeist, Joost N. P. van Stralen, Daan P. Geerke, Lando P. Wolters, Jordi Poater, Trevor A. Hamlin, F. Matthias Bickelhaupt

المساهمون: Chemistry and Pharmaceutical Sciences, Theoretical Chemistry, Molecular and Computational Toxicology, AIMMS

المصدر: Chemistry-A European Journal, 28(44):e202201093. Wiley-VCH Verlag
Chemistry : a European Journal, 28, 44, pp. 1-11
Chemistry : a European Journal, 28, 1-11
Hansen, T, Sun, X, Dalla Tiezza, M, van Zeist, W J, van Stralen, J N P, Geerke, D P, Wolters, L P, Poater, J, Hamlin, T A & Bickelhaupt, F M 2022, ' C−X Bond Activation by Palladium : Steric Shielding versus Steric Attraction ', Chemistry-A European Journal, vol. 28, no. 44, e202201093 . https://doi.org/10.1002/chem.202201093

مصطلحات موضوعية: reactivity, bond activation, activation strain model, oxidative addition, Organic Chemistry, density functional calculations, General Chemistry, SDG 7 - Affordable and Clean Energy, Theoretical Chemistry, homogeneous catalysis, Palladium, Catalysis

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15891cdab25a07c73a5d9b51a9a4cf08
http://www.scopus.com/inward/record.url?scp=85131958101&partnerID=8YFLogxK

المؤلفون: Gunny van Stempvoort, Alexander Speer, Coen Kuijl, Vien Q. T. Ho, Eva Habjan, Kin Ki Jim, James Gallant, Wilbert Bitter, Daan P. Geerke

المساهمون: Medical Microbiology and Infection Prevention, AII - Infectious diseases, Molecular Microbiology, Molecular and Computational Toxicology, AIMMS

المصدر: Habjan, E, Ho, V Q T, Gallant, J, van Stempvoort, G, Jim, K K, Kuijl, C, Geerke, D P, Bitter, W & Speer, A 2021, ' An anti-tuberculosis compound screen using a zebrafish infection model identifies an aspartyl-tRNA synthetase inhibitor ', DMM Disease Models and Mechanisms, vol. 14, no. 12, dmm049145 . https://doi.org/10.1242/dmm.049145
Habjan, E, Ho, V Q T, Gallant, J, van Stempvoort, G, Jim, K K, Kuijl, C, Geerke, D P, Bitter, W & Speer, A 2021, ' An anti-tuberculosis compound screen using a zebrafish infection model identifies an aspartyl-tRNA synthetase inhibitor ', Disease Models and Mechanisms, vol. 14, no. 12 . https://doi.org/10.1242/dmm.049145
Disease Models and Mechanisms, 14(12). Company of Biologists Ltd
DMM Disease Models and Mechanisms, 14(12):dmm049145. Company of Biologists Ltd
Disease Models & Mechanisms, Vol 14, Iss 12 (2021)
Disease Models & Mechanisms
article-version (VoR) Version of Record

مصطلحات موضوعية: Tuberculosis, medicine.drug_class, Aspartate-tRNA Ligase, Antibiotics, Neuroscience (miscellaneous), Medicine (miscellaneous), General Biochemistry, Genetics and Molecular Biology, Mycobacterium tuberculosis, chemistry.chemical_compound, Infection model, Immunology and Microbiology (miscellaneous), SDG 3 - Good Health and Well-being, In vivo, Zebrafish as a Disease Model, Pathology, medicine, Animals, RB1-214, Zebrafish, Mycobacterium marinum, biology, Aminoacyl tRNA synthetase, Point mutation, biology.organism_classification, medicine.disease, Molecular Docking Simulation, chemistry, Biochemistry, Drug screening, Aminoacyl-tRNA synthetase, Medicine, Model Systems in Drug Discovery, Research Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b997964d981d57640f57146042559c71
https://hdl.handle.net/1871.1/bbdc69b6-9121-4f07-bf2c-30353ecda6fd

المؤلفون: Marlies C. A. Verkade-Vreeker, Jan N. M. Commandeur, Rosa A. Luirink, Daan P. Geerke

المساهمون: AIMMS, Molecular and Computational Toxicology

المصدر: ChemBioChem, 21(10), 1461-1472. Wiley-VCH Verlag
Chembiochem
Luirink, R A, Verkade-Vreeker, M C A, Commandeur, J N M & Geerke, D P 2020, ' A Modified Arrhenius Approach to Thermodynamically Study Regioselectivity in Cytochrome P450-Catalyzed Substrate Conversion ', ChemBioChem, vol. 21, no. 10, pp. 1461-1472 . https://doi.org/10.1002/cbic.201900751

مصطلحات موضوعية: cytochrome P450, Heme, Molecular Dynamics Simulation, 010402 general chemistry, Hydroxylation, 01 natural sciences, Biochemistry, Catalysis, Enzyme catalysis, Substrate Specificity, Reaction rate, Molecular dynamics, symbols.namesake, Mefenamic Acid, thermodynamics, Cytochrome P-450 Enzyme System, Computational chemistry, SDG 7 - Affordable and Clean Energy, Molecular Biology, Arrhenius equation, validation, Binding Sites, Full Paper, 010405 organic chemistry, Chemistry, Organic Chemistry, selectivity, Substrate (chemistry), Regioselectivity, Full Papers, molecular dynamics, 0104 chemical sciences, symbols, Molecular Medicine, Selectivity, Oxidation-Reduction, Protein Binding

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1f767c67c56cae9812128734afc7311
https://research.vu.nl/en/publications/a534b2c1-d9cc-4312-96d6-46665930752d