نتائج البحث - "Deepti R. Nagarkar"

1

Enrichment of oral-derived bacteria in inflamed colorectal tumors and distinct associations of Fusobacterium in the mesenchymal subtype

المؤلفون: Brett S. Younginger, Oleg Mayba, Jens Reeder, Deepti R. Nagarkar, Zora Modrusan, Matthew L. Albert, Allyson L. Byrd

المصدر: Cell Reports Medicine. 4:100920

مصطلحات موضوعية: General Biochemistry, Genetics and Molecular Biology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::9ce9de4f041dfb6cac14200fc58980ec
https://doi.org/10.1016/j.xcrm.2023.100920

Full Text via ClinicalKey

2

In silico tools for accurate HLA and KIR inference from clinical sequencing data empower immunogenetics on individual-patient and population scales

المؤلفون: Julie Hunkapiller, Maciej Migdal, Sanjeev Mariathasan, Matthew L. Albert, Edward E. Kadel, Diana Chang, Suresh Selvaraj, Suchit Jhunjhunwala, Jieming Chen, Deepti R. Nagarkar, Jason A. Vander Heiden, Kiran Mukhyala, Matthew J. Brauer, Shravan Madireddi, Christian Hammer

المصدر: Briefings in Bioinformatics

مصطلحات موضوعية: 0301 basic medicine, AcademicSubjects/SCI01060, Genotype, Genotyping Techniques, In silico, Population, imputation, clinical sequencing, Human leukocyte antigen, Computational biology, Immunogenetics, Biology, Major histocompatibility complex, Polymorphism, Single Nucleotide, DNA sequencing, 03 medical and health sciences, 0302 clinical medicine, Gene Frequency, Receptors, KIR, HLA Antigens, Exome Sequencing, Humans, Computer Simulation, Allele, education, Molecular Biology, Alleles, Whole genome sequencing, education.field_of_study, Case Study, Whole Genome Sequencing, Haplotype, High-Throughput Nucleotide Sequencing, KIR, HLA, immunogenetics, Phenotype, 030104 developmental biology, Haplotypes, whole-genome sequencing, 030220 oncology & carcinogenesis, biology.protein, Imputation (genetics), Information Systems

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0da1499b3d9934090bab7d49bd0a6cd7
https://doi.org/10.1101/2020.04.24.060459

3

Gut microbiome stability and dynamics in healthy donors and patients with non-gastrointestinal cancers

المؤلفون: Oliver J. Harrison, Lluis Quintana-Murci, Allyson L. Byrd, Darragh Duffy, Deepti R. Nagarkar, Jacob Bergstedt, Etienne Patin, Menghan Liu, Matthew L. Albert, Bruno Charbit, Kei E. Fujimura, Ira Mellman, Svetlana Lyalina

المساهمون: Genentech, Inc. [San Francisco], New York University School of Medicine, NYU System (NYU), Cytometrie et Biomarqueurs – Cytometry and Biomarkers (UTechS CB), Institut Pasteur [Paris], Génétique Evolutive Humaine - Human Evolutionary Genetics, Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), Benaroya Research Institute [Seattle] (BRI), Chaire Génomique humaine et évolution, Collège de France (CdF (institution)), Immunologie Translationnelle - Translational Immunology lab, Insitro [San Francisco], This work benefited from support of the French government’s Invest in the Future program. This program is managed by the Agence Nationale de la Recherche, reference ANR-10-LABX-69-01., We thank all the donors for their participation in the study. We thank J. Segre and F. Tamburini for critical reading of the manuscript and helpful comments. We also thank J. Paulson and O. Mayba for expert statistical support., The Milieu Intérieur Consortium is composed of the following team leaders: Laurent Abel, Andres Alcover, Hugues Aschard, Kalla Astrom, Philippe Bousso, Pierre Bruhns, Ana Cumano, Caroline Demangel, Ludovic Deriano, James Di Santo, Françoise Dromer, Gérard Eberl, Jost Enninga, Jacques Fellay, Ivo Gomperts-Boneca, Milena Hasan, Serge Hercberg, Olivier Lantz, Hugo Mouquet, Etienne Patin, Sandra Pellegrini, Stanislas Pol, Antonio Rausell, Lars Rogge, Anavaj Sakuntabhai, Olivier Schwartz, Benno Schwikowski, Spencer Shorte, Frédéric Tangy, Antoine Toubert, Mathilde Touvier, Marie-Noëlle Ungeheuer, Darragh Duffy, Matthew L. Albert, and Lluis Quintana-Murci., ANR-10-LABX-0069,MILIEU INTERIEUR,GENETIC & ENVIRONMENTAL CONTROL OF IMMUNE PHENOTYPE VARIANCE: ESTABLISHING A PATH TOWARDS PERSONALIZED MEDICINE(2010), Institut Pasteur [Paris] (IP), Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Collège de France - Chaire Génomique humaine et évolution

المصدر: The Journal of Experimental Medicine
Journal of Experimental Medicine
Journal of Experimental Medicine, Rockefeller University Press, 2020, 218 (1), ⟨10.1084/jem.20200606⟩
Journal of Experimental Medicine, 2020, 218 (1), ⟨10.1084/jem.20200606⟩