المؤلفون: Bourn JJ; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany. Electronic address: https://twitter.com/@bournsupremacy., Dorrity MW; Structural and Computational Biology, European Molecular Biology Laboratory, Heidelberg, Germany. Electronic address: dorrity@embl.de.

المصدر: Current opinion in genetics & development [Curr Opin Genet Dev] 2024 Apr; Vol. 85, pp. 102155. Date of Electronic Publication: 2024 Feb 09.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Elsevier Country of Publication: England NLM ID: 9111375 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0380 (Electronic) Linking ISSN: 0959437X NLM ISO Abbreviation: Curr Opin Genet Dev Subsets: MEDLINE

مواضيع طبية MeSH: Embryonic Development*/genetics , Biological Evolution*, Temperature ; Homeostasis

المؤلفون: Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Structural and Computational Biology, European Molecular Biology Laboratory, 69117 Heidelberg, Germany. Electronic address: dorrity@embl.de., Saunders LM; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Duran M; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Srivatsan SR; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Barkan E; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Jackson DL; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Sattler SM; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Ewing B; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA; Brotman Baty Institute for Precision Medicine, Seattle, WA 98195, USA; Howard Hughes Medical Institute, Seattle, WA 98195, USA., Raible DW; Department of Biological Structure, University of Washington, Seattle, WA 98195, USA., Kimelman D; Department of Biochemistry, University of Washington, Seattle, WA 98195, USA., Trapnell C; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA. Electronic address: coletrap@uw.edu.

المصدر: Cell [Cell] 2023 Nov 09; Vol. 186 (23), pp. 5015-5027.e12.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

مواضيع طبية MeSH: Proteostasis* , Zebrafish*/growth & development, Animals ; Embryonic Development ; Gene Expression Regulation, Developmental ; Temperature

المؤلفون: Saunders LM; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Srivatsan SR; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Duran M; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Ewing B; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Linbo TH; Department of Biological Structure, University of Washington, Seattle, WA, USA., Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA, USA.; Howard Hughes Medical Institute, Seattle, WA, USA.; Allen Discovery Center for Cell Lineage Tracing, Seattle, WA, USA., Raible DW; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Department of Biological Structure, University of Washington, Seattle, WA, USA., Moens CB; Fred Hutchinson Cancer Center, Seattle, WA, USA., Kimelman D; Department of Genome Sciences, University of Washington, Seattle, WA, USA. kimelman@uw.edu.; Department of Biochemistry, University of Washington, Seattle, WA, USA. kimelman@uw.edu., Trapnell C; Department of Genome Sciences, University of Washington, Seattle, WA, USA. coletrap@uw.edu.; Brotman Baty Institute for Precision Medicine, University of Washington, Seattle, WA, USA. coletrap@uw.edu.; Allen Discovery Center for Cell Lineage Tracing, Seattle, WA, USA. coletrap@uw.edu.

المصدر: Nature [Nature] 2023 Nov; Vol. 623 (7988), pp. 782-791. Date of Electronic Publication: 2023 Nov 15.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

مواضيع طبية MeSH: Embryo, Mammalian*/embryology , Embryo, Mammalian*/metabolism , Reverse Genetics*/methods , Zebrafish*/embryology , Zebrafish*/genetics , Single-Cell Analysis*/methods, Animals ; Gene Expression Profiling ; Gene Expression Regulation, Developmental ; Transcriptome/genetics ; Mutation ; Notochord/cytology ; Notochord/embryology

المؤلفون: Kim ED; Howard Hughes Medical Institute, Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA., Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Fitzgerald BA; Howard Hughes Medical Institute, Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA., Seo H; Howard Hughes Medical Institute, Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA., Sepuru KM; Howard Hughes Medical Institute, Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Mitsuda N; Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan., Han SK; Institute of Transformative Biomolecules (WPI-ITbM), Nagoya University, Nagoya, Aichi, Japan.; Department of New Biology, DGIST, Daegu, Republic of Korea., Torii KU; Howard Hughes Medical Institute, Department of Molecular Biosciences, The University of Texas at Austin, Austin, TX, USA. ktorii@utexas.edu.; Institute of Transformative Biomolecules (WPI-ITbM), Nagoya University, Nagoya, Aichi, Japan. ktorii@utexas.edu.

المصدر: Nature plants [Nat Plants] 2022 Dec; Vol. 8 (12), pp. 1453-1466. Date of Electronic Publication: 2022 Dec 15.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group, a division of Macmillan Publishers Limited Country of Publication: England NLM ID: 101651677 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2055-0278 (Electronic) Linking ISSN: 20550278 NLM ISO Abbreviation: Nat Plants Subsets: MEDLINE

مواضيع طبية MeSH: Chromatin* , Trans-Activators*, Transcription Factors/genetics ; Transcription Factors/metabolism ; Cell Differentiation

المؤلفون: Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Alexandre CM; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Hamm MO; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Vigil AL; School of Life Sciences, University of Nevada, Las Vegas, NV, USA., Fields S; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Department of Medicine, University of Washington, Seattle, WA, USA., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, WA, USA. queitsch@uw.edu., Cuperus JT; Department of Genome Sciences, University of Washington, Seattle, WA, USA. cuperusj@uw.edu.

المصدر: Nature communications [Nat Commun] 2021 Jun 07; Vol. 12 (1), pp. 3334. Date of Electronic Publication: 2021 Jun 07.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Arabidopsis/*genetics , Arabidopsis Proteins/*genetics , Arabidopsis Proteins/*metabolism , Plant Roots/*genetics , Plant Roots/*metabolism, Biotechnology ; Chromatin ; Gene Expression Regulation, Plant ; Gene Regulatory Networks ; Transcription Factors ; Transcriptome

المؤلفون: Jores T; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Tonnies J; Department of Genome Sciences, University of Washington, Seattle, Washington 98195.; Graduate Program in Biology, University of Washington, Seattle, Washington 98195., Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Cuperus JT; Department of Genome Sciences, University of Washington, Seattle, Washington 98195 cuperusj@uw.edu fields@uw.edu queitsch@uw.edu., Fields S; Department of Genome Sciences, University of Washington, Seattle, Washington 98195 cuperusj@uw.edu fields@uw.edu queitsch@uw.edu.; Department of Medicine, University of Washington, Seattle, Washington 98195., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, Washington 98195 cuperusj@uw.edu fields@uw.edu queitsch@uw.edu.

المصدر: The Plant cell [Plant Cell] 2020 Jul; Vol. 32 (7), pp. 2120-2131. Date of Electronic Publication: 2020 May 14.

نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9208688 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1532-298X (Electronic) Linking ISSN: 10404651 NLM ISO Abbreviation: Plant Cell Subsets: MEDLINE

مواضيع طبية MeSH: Enhancer Elements, Genetic*, Plant Leaves/*genetics , Plant Proteins/*genetics , Nicotiana/*genetics, Agrobacterium/genetics ; Gene Expression Regulation, Plant ; Genes, Reporter ; Green Fluorescent Proteins/genetics ; Light ; Plant Viruses/genetics ; Plants, Genetically Modified ; Promoter Regions, Genetic ; Proof of Concept Study ; Transformation, Genetic ; Triticum/genetics

المؤلفون: Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA., Saunders LM; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA., Fields S; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA. fields@uw.edu.; Department of Medicine, University of Washington, Seattle, WA, 98195, USA. fields@uw.edu., Trapnell C; Department of Genome Sciences, University of Washington, Seattle, WA, 98195, USA. coletrap@uw.edu.

المصدر: Nature communications [Nat Commun] 2020 Mar 24; Vol. 11 (1), pp. 1537. Date of Electronic Publication: 2020 Mar 24.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Algorithms*, Gene Expression Profiling/*methods , Protein Interaction Mapping/*methods , Saccharomyces cerevisiae/*genetics , Saccharomyces cerevisiae Proteins/*genetics, Computational Biology ; Datasets as Topic ; Feasibility Studies ; Mutation ; Saccharomyces cerevisiae Proteins/metabolism ; Sensitivity and Specificity ; Signal Transduction/genetics

المؤلفون: Zhou W; Department of Genome Sciences, University of Washington, Seattle, Washington 98195.; Molecular and Cellular Biology Program, University of Washington, Seattle, Washington 98195., Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Bubb KL; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Fields S; Department of Genome Sciences, University of Washington, Seattle, Washington 98195 fields@uw.edu.; Department of Medicine, University of Washington, Seattle, Washington 98195.

المصدر: Genetics [Genetics] 2020 Feb; Vol. 214 (2), pp. 397-407. Date of Electronic Publication: 2019 Dec 06.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Oxford University Press Country of Publication: United States NLM ID: 0374636 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1943-2631 (Electronic) Linking ISSN: 00166731 NLM ISO Abbreviation: Genetics Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation, Fungal/*genetics , Saccharomyces cerevisiae Proteins/*genetics , Transcription Factors/*genetics, Amino Acid Substitution/genetics ; Base Sequence/genetics ; DNA-Binding Proteins/genetics ; Phenotype ; Saccharomyces cerevisiae/genetics ; Saccharomyces cerevisiae Proteins/metabolism ; Transcription Factors/metabolism ; Transcription, Genetic/genetics

المؤلفون: Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Fields S; Department of Genome Sciences, University of Washington, Seattle, WA, USA. fields@uw.edu.; Department of Medicine, University of Washington, Seattle, WA, USA. fields@uw.edu.

المصدر: Nature methods [Nat Methods] 2019 May; Vol. 16 (5), pp. 413-416. Date of Electronic Publication: 2019 Apr 08.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

مواضيع طبية MeSH: Genes, Dominant* , Genes, Fungal*, High-Throughput Nucleotide Sequencing/*methods , Peptides/*genetics , Saccharomyces cerevisiae/*genetics, DNA-Binding Proteins/genetics ; Gene Library ; Heat-Shock Proteins/genetics ; Saccharomyces cerevisiae Proteins/genetics ; Sequence Analysis, DNA ; Transcription Factors/genetics

المؤلفون: Jean-Baptiste K; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., McFaline-Figueroa JL; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Alexandre CM; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Dorrity MW; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Saunders L; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Bubb KL; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Trapnell C; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Fields S; Department of Genome Sciences, University of Washington, Seattle, Washington 98195.; Department of Medicine, University of Washington, Seattle, Washington 98195., Queitsch C; Department of Genome Sciences, University of Washington, Seattle, Washington 98195., Cuperus JT; Department of Genome Sciences, University of Washington, Seattle, Washington 98195 cuperusj@uw.edu queitsch@uw.edu.

المصدر: The Plant cell [Plant Cell] 2019 May; Vol. 31 (5), pp. 993-1011. Date of Electronic Publication: 2019 Mar 28.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9208688 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1532-298X (Electronic) Linking ISSN: 10404651 NLM ISO Abbreviation: Plant Cell Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation, Plant* , Transcriptome*, Arabidopsis/*genetics , Arabidopsis Proteins/*genetics, Arabidopsis/physiology ; Arabidopsis Proteins/metabolism ; Gene Expression Profiling ; Heat-Shock Response ; Plant Roots/genetics ; Plant Roots/physiology ; Sequence Analysis, RNA ; Single-Cell Analysis ; Stress, Physiological ; Transcription Factors/genetics ; Transcription Factors/metabolism