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المؤلفون: Wilkins KC; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California 94143, USA.; Graduate Division, University of California, San Francisco, San Francisco, California 94143, USA., Schroeder T; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California 94143, USA.; Faculty of Chemistry and Pharmacy, Julius-Maximilians-University of Würzburg, Würzburg 97070, Germany., Gu S; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California 94143, USA., Revalde JL; Department of Pharmaceutical Chemistry, University of California, San Francisco, California 94143, USA., Floor SN; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California 94143, USA stephen@floorlab.org.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California 94143, USA.

المصدر: RNA (New York, N.Y.) [RNA] 2024 Jul 16; Vol. 30 (8), pp. 1041-1057. Date of Electronic Publication: 2024 Jul 16.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9509184 Publication Model: Electronic Cited Medium: Internet ISSN: 1469-9001 (Electronic) Linking ISSN: 13558382 NLM ISO Abbreviation: RNA Subsets: MEDLINE

مواضيع طبية MeSH: DEAD-box RNA Helicases*/metabolism , DEAD-box RNA Helicases*/genetics , 5' Untranslated Regions* , Protein Biosynthesis* , Genes, Reporter*, Humans ; Nucleic Acid Conformation ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; HEK293 Cells ; Protein Binding

المؤلفون: Ietswaart R; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA. Electronic address: robert.ietswaart@cellforma.com., Smalec BM; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., Xu A; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143, USA., Choquet K; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., McShane E; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., Jowhar ZM; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143, USA., Guegler CK; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., Baxter-Koenigs AR; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., West ER; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA., Fu BXH; Arc Institute, Palo Alto, CA 94305, USA., Gilbert L; Arc Institute, Palo Alto, CA 94305, USA; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA 94143, USA; Department of Urology, University of California, San Francisco, San Francisco, CA 94518, USA., Floor SN; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA 94143, USA; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA 94143, USA. Electronic address: stephen@floorlab.org., Churchman LS; Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA. Electronic address: churchman@genetics.med.harvard.edu.

المصدر: Molecular cell [Mol Cell] 2024 Jun 27. Date of Electronic Publication: 2024 Jun 27.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 9802571 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4164 (Electronic) Linking ISSN: 10972765 NLM ISO Abbreviation: Mol Cell Subsets: MEDLINE

المؤلفون: Park J; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA.; https://ror.org/043mz5j54 Tetrad Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Desai H; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA., Liboy-Lugo JM; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA.; https://ror.org/043mz5j54 Tetrad Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Gu S; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA., Jowhar Z; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA.; https://ror.org/043mz5j54 Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Xu A; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA.; https://ror.org/043mz5j54 Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Floor SN; https://ror.org/043mz5j54 Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA stephen@floorlab.org.; https://ror.org/043mz5j54 Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.

المصدر: Life science alliance [Life Sci Alliance] 2024 May 21; Vol. 7 (8). Date of Electronic Publication: 2024 May 21 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Life Science Alliance, LLC Country of Publication: United States NLM ID: 101728869 Publication Model: Electronic-Print Cited Medium: Internet ISSN: 2575-1077 (Electronic) Linking ISSN: 25751077 NLM ISO Abbreviation: Life Sci Alliance Subsets: MEDLINE

مواضيع طبية MeSH: Protein Biosynthesis*/genetics , Transcription Factors*/genetics , Transcription Factors*/metabolism , Stress, Physiological*/genetics , DNA-Binding Proteins*/genetics , DNA-Binding Proteins*/metabolism, Humans ; K562 Cells ; Activating Transcription Factor 4/genetics ; Activating Transcription Factor 4/metabolism ; Gene Deletion ; Gene Expression Regulation ; RNA, Transfer/genetics ; RNA, Transfer/metabolism

المؤلفون: Jowhar Z; Department of Cell and Tissue Biology, UCSF, San Francisco, USA.; Medical Scientist Training Program, University of California, San Francisco, San Francisco, CA, 94158, USA.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, 94158, USA., Xu A; Department of Cell and Tissue Biology, UCSF, San Francisco, USA.; Medical Scientist Training Program, University of California, San Francisco, San Francisco, CA, 94158, USA.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, 94158, USA., Venkataramanan S; Department of Cell and Tissue Biology, UCSF, San Francisco, USA., Dossena F; Human Technopole, Milan, Italy., Hoye ML; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, USA., Silver DL; Department of Molecular Genetics and Microbiology, Duke University Medical Center, Durham, USA.; Department of Cell Biology, Duke University Medical Center, Durham, USA.; Duke Regeneration Center, Duke University Medical Center, Durham, USA.; Department of Neurobiology, Duke University Medical Center, Durham, USA.; Duke Institute for Brain Sciences, Duke University Medical Center, Durham, USA., Floor SN; Department of Cell and Tissue Biology, UCSF, San Francisco, USA. Stephen.Floor@ucsf.edu.; Helen Diller Family Comprehensive Cancer Center, San Francisco, USA. Stephen.Floor@ucsf.edu., Calviello L; Human Technopole, Milan, Italy. Lorenzo.Calviello@fht.org.

المصدر: Molecular systems biology [Mol Syst Biol] 2024 Mar; Vol. 20 (3), pp. 276-290. Date of Electronic Publication: 2024 Jan 25.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: EMBO Press Country of Publication: England NLM ID: 101235389 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-4292 (Electronic) Linking ISSN: 17444292 NLM ISO Abbreviation: Mol Syst Biol Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation* , RNA*, Animals ; Mice ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Base Composition ; Cell Cycle/genetics

المؤلفون: Liboy-Lugo JM; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA.; Tetrad Graduate Program, University of California, San Francisco, San Francisco, California, USA., Espinoza CA; Tetrad Graduate Program, University of California, San Francisco, San Francisco, California, USA.; Cardiovascular Research Institute, University of California, San Francisco, San Francisco, California, USA.; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, California, USA., Sheu-Gruttadauria J; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA.; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, California, USA., Park JE; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA., Xu A; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA., Jowhar Z; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, California, USA., Gao AL; Tetrad Graduate Program, University of California, San Francisco, San Francisco, California, USA., Carmona-Negrón JA; Cardiovascular Research Institute, University of California, San Francisco, San Francisco, California, USA.; Department of Chemistry, University of Puerto Rico, Mayaguez, Puerto Rico, USA., Wittmann T; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA., Jura N; Cardiovascular Research Institute, University of California, San Francisco, San Francisco, California, USA.; Department of Cellular and Molecular Pharmacology, University of California, San Francisco, San Francisco, California, USA.; Quantitative Biosciences Institute, University of California, San Francisco, San Francisco, California, USA., Floor SN; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California, USA.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Feb 07. Date of Electronic Publication: 2024 Feb 07.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Park JE; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143.; Tetrad Graduate Program, University of California, San Francisco, San Francisco, California, USA, 94143., Desai H; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143., Liboy-Lugo J; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143.; Tetrad Graduate Program, University of California, San Francisco, San Francisco, California, USA, 94143., Gu S; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143., Jowhar Z; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, California, USA, 94143., Xu A; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143.; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, California, USA, 94143., Floor SN; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, California, USA, 94143.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, California, USA, 94143.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Dec 12. Date of Electronic Publication: 2023 Dec 12.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Lin Y; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA., Kwok S; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA., Hein AE; Tetrad Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Thai BQ; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA.; MSTP Program, University of Arizona, Tuscon, AZ, USA., Alabi Y; Biomedical Sciences Graduate Program, University of California, San Francisco, San Francisco, CA, USA., Ostrowski MS; Gladstone Institute for Data Science and Biotechnology, San Francisco, CA, USA., Wu K; Gladstone Institute for Data Science and Biotechnology, San Francisco, CA, USA., Floor SN; Department of Cell and Tissue Biology, University of California, San Francisco, San Francisco, CA, USA. stephen@floorlab.org.; Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA. stephen@floorlab.org.

المصدر: Nature methods [Nat Methods] 2023 Dec; Vol. 20 (12), pp. 1887-1899. Date of Electronic Publication: 2023 Oct 19.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

مواضيع طبية MeSH: RNA*/genetics , Cytidine Deaminase*/genetics , Cytidine Deaminase*/metabolism, Animals ; Base Sequence ; Protein Isoforms/genetics ; Protein Isoforms/metabolism ; RNA, Messenger/genetics ; Mammals/genetics ; Mammals/metabolism