المؤلفون: Li H; Department of Medicine, Genetics and Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA., Hong L; Department of Medicine, Genetics and Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA., Szymczak W; Montefiore Medical Center, Bronx, NY 10467, USA; Department of Pathology, Albert Einstein College of Medicine, Bronx, NY 10461, USA., Orner E; Montefiore Medical Center, Bronx, NY 10467, USA; Department of Pathology, Albert Einstein College of Medicine, Bronx, NY 10461, USA., Garber AI; Middle Author Bioinformatics, LLC., Tempe, AZ 85282, USA., Cooper VS; Department of Microbiology and Molecular Genetics, University of Pittsburgh, School of Medicine, Pittsburgh, PA 15213, USA; Center for Evolutionary Biology and Medicine, University of Pittsburgh, School of Medicine, Pittsburgh, PA 15213, USA; Department of Molecular, Cellular, and Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA., Chen W; Department of Medicine, Genetics and Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA; Intelligent Medicine Institute, Shanghai Medical College, Fudan University, Shanghai 200032, China., De A; Department of Medicine, Genetics and Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA., Tang JX; Brown University, Physics Department, Providence, RI 02912, USA., Mani S; Department of Medicine, Genetics and Molecular Pharmacology, Albert Einstein College of Medicine, Bronx, NY 10461, USA. Electronic address: sridhar.mani@einsteinmed.edu.

المصدر: STAR protocols [STAR Protoc] 2024 Jun 21; Vol. 5 (2), pp. 102961. Date of Electronic Publication: 2024 Apr 03.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 101769501 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-1667 (Electronic) Linking ISSN: 26661667 NLM ISO Abbreviation: STAR Protoc Subsets: MEDLINE

مواضيع طبية MeSH: Feces*/microbiology , Bacteria*/genetics, Humans ; Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods ; Whole Genome Sequencing/methods

المؤلفون: Garber AI; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Sano EB; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Gallagher AL; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Miller SR; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA.

المصدر: Genome biology and evolution [Genome Biol Evol] 2024 May 02; Vol. 16 (5).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

مواضيع طبية MeSH: Gene Duplication* , Genome, Bacterial* , Cyanobacteria*/genetics , Cyanobacteria*/metabolism , Evolution, Molecular*, Gene Dosage ; Gene Expression Regulation, Bacterial ; Genes, Duplicate

المؤلفون: McCutcheon JP; Biodesign Institute and School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America.; Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America., Garber AI; Biodesign Institute and School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America., Spencer N; Biodesign Institute and School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America., Warren JM; Biodesign Institute and School of Life Sciences, Arizona State University, Tempe, Arizona, United States of America.; Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America.

المصدر: PLoS biology [PLoS Biol] 2024 Apr 16; Vol. 22 (4), pp. e3002577. Date of Electronic Publication: 2024 Apr 16 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE

مواضيع طبية MeSH: Bacteria*/genetics , Eukaryota*/genetics, Animals ; Genome, Bacterial/genetics ; Symbiosis/genetics ; Bacterial Physiological Phenomena ; Phylogeny

المؤلفون: Garber AI; Biodesign Center for Mechanisms of Evolution and School of Life Sciences, Arizona State University, Tempe, AZ, USA., Garcia de la Filia Molina A; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK., Vea IM; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK., Mongue AJ; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK.; Department of Entomology and Nematology, University of Florida, Gainesville, FL, USA., Ross L; Institute of Ecology and Evolution, University of Edinburgh, Edinburgh, UK., McCutcheon JP; Biodesign Center for Mechanisms of Evolution and School of Life Sciences, Arizona State University, Tempe, AZ, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA.

المصدر: Genome biology and evolution [Genome Biol Evol] 2024 Apr 02; Vol. 16 (4).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

مواضيع طبية MeSH: Symbiosis*/genetics , Hemiptera*/genetics , Hemiptera*/microbiology, Animals ; Phylogeny ; Insecta ; Bacteria/genetics

المؤلفون: Ramírez GA; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel.; Present address: Department of Biological Sciences, California State University, Los Angeles, CA, USA., Bar-Shalom R; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel., Furlan A; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel., Romeo R; Istituto Nazionale di Oceanografia e di Geofisica Sperimentale, Trieste, Italy., Gavagnin M; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel., Calabrese G; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel., Garber AI; School of Life Science, Arizona State University, Tempe, AZ, USA., Steindler L; Department of Marine Biology, Leon H. Charney School of Marine Sciences, University of Haifa, 199 Aba Khoushy Ave., Mount Carmel, Haifa, Israel. lsteindler@univ.haifa.ac.il.

المصدر: Microbiome [Microbiome] 2023 Mar 10; Vol. 11 (1), pp. 49. Date of Electronic Publication: 2023 Mar 10.

نوع المنشور: Video-Audio Media; Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

مواضيع طبية MeSH: Porifera*/microbiology , Microbiota*, Animals ; Methane/metabolism ; Bacteria/metabolism ; Archaea/genetics ; Water ; Phylogeny ; Geologic Sediments/microbiology ; RNA, Ribosomal, 16S/metabolism

المؤلفون: Syberg-Olsen MJ; Department of Botany, University of British Columbia, Vancouver, BC, Canada., Garber AI; Division of Biological Sciences, University of Montana, Missoula, MT, USA., Keeling PJ; Department of Botany, University of British Columbia, Vancouver, BC, Canada., McCutcheon JP; Division of Biological Sciences, University of Montana, Missoula, MT, USA.; Howard Hughes Medical Institute, 4000 Jones Bridge Road, Chevy Chase, MD, USA., Husnik F; Department of Botany, University of British Columbia, Vancouver, BC, Canada.; Okinawa Institute of Science and Technology, Okinawa, Japan.

المصدر: Molecular biology and evolution [Mol Biol Evol] 2022 Jul 02; Vol. 39 (7).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: United States NLM ID: 8501455 Publication Model: Print Cited Medium: Internet ISSN: 1537-1719 (Electronic) Linking ISSN: 07374038 NLM ISO Abbreviation: Mol Biol Evol Subsets: MEDLINE

مواضيع طبية MeSH: Genome, Archaeal* , Pseudogenes*/genetics, Bacteria/genetics ; Prokaryotic Cells ; Software

المؤلفون: Ramírez GA; College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA, United States.; Leon H. Charney School of Marine Sciences, Haifa University, Haifa, Israel., Keshri J; College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA, United States., Vahrson I; College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA, United States., Garber AI; School of Life Sciences, Arizona State University, Tempe, AZ, United States., Berrang ME; Poultry Microbiological Safety and Processing Research Unit, USDA Agricultural Research Service, Athens, GA, United States., Cox NA; Poultry Microbiological Safety and Processing Research Unit, USDA Agricultural Research Service, Athens, GA, United States., González-Cerón F; Departamento de Zootecnia, Chapingo Autonomous University, Estado de Mexico, Mexico.; NutriGenomics Laboratory, Department of Poultry Science, University of Georgia, Athens, GA, United States., Aggrey SE; NutriGenomics Laboratory, Department of Poultry Science, University of Georgia, Athens, GA, United States., Oakley BB; College of Veterinary Medicine, Western University of Health Sciences, Pomona, CA, United States.

المصدر: Frontiers in veterinary science [Front Vet Sci] 2022 Jun 21; Vol. 9, pp. 904698. Date of Electronic Publication: 2022 Jun 21 (Print Publication: 2022).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 101666658 Publication Model: eCollection Cited Medium: Print ISSN: 2297-1769 (Print) Linking ISSN: 22971769 NLM ISO Abbreviation: Front Vet Sci Subsets: PubMed not MEDLINE

المؤلفون: Garber AI; Biodesign Center for Mechanisms of Evolution, Arizona State University, Tempe, AZ, 85287, USA. agarber4@asu.edu., Armbruster CR; Department of Microbiology and Molecular Genetics, School of Medicine, University of Pittsburgh, Pittsburgh, PA, 15219, USA., Lee SE; Department of Otolaryngology, University of Pittsburgh Medical Center, Pittsburgh, PA, 15213, USA., Cooper VS; Department of Microbiology and Molecular Genetics, School of Medicine, University of Pittsburgh, Pittsburgh, PA, 15219, USA., Bomberger JM; Department of Microbiology and Molecular Genetics, School of Medicine, University of Pittsburgh, Pittsburgh, PA, 15219, USA., McAllister SM; Pacific Marine Environmental Laboratory, National Oceanic and Atmospheric Administration, Seattle, WA, 98115, USA. mcallis@uw.edu.; The Cooperative Institute for Climate, Ocean, and Ecosystem Studies, University of Washington, Seattle, WA, 98105, USA. mcallis@uw.edu.

المصدر: BMC genomics [BMC Genomics] 2022 Mar 12; Vol. 23 (1), pp. 202. Date of Electronic Publication: 2022 Mar 12.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

مواضيع طبية MeSH: Metagenome* , Microbiota*/genetics, Bacteria/genetics ; Metagenomics ; Software

المؤلفون: Miller SR; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Abresch HE; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Baroch JJ; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Fishman Miller CK; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Garber AI; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Oman AR; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA., Ulrich NJ; Division of Biological Sciences, University of Montana, Missoula, MT 59812, USA.

المصدر: Microorganisms [Microorganisms] 2022 Mar 06; Vol. 10 (3). Date of Electronic Publication: 2022 Mar 06.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101625893 Publication Model: Electronic Cited Medium: Print ISSN: 2076-2607 (Print) Linking ISSN: 20762607 NLM ISO Abbreviation: Microorganisms Subsets: PubMed not MEDLINE

المؤلفون: Garber AI; Biodesign Center for Mechanisms for Evolution, Arizona State University, Tempe, Arizona, USA., Zehnpfennig JR; Department of Biology, Central Michigan Universitygrid.253856.f, Mt. Pleasant, Michigan, USA., Sheik CS; Biology Department and Large Lakes Observatory, University of Minnesota Duluth, Duluth, Minnesota, USA., Henson MW; Department of Biology, Central Michigan Universitygrid.253856.f, Mt. Pleasant, Michigan, USA., Ramírez GA; College of Veterinary Medicine, Western University of Health Sciences, Pomona, California, USA.; Department of Marine Biology, Haifa University, Haifa, Israel., Mahon AR; Department of Biology, Central Michigan Universitygrid.253856.f, Mt. Pleasant, Michigan, USA., Halanych KM; Center for Marine Science, University of North Carolina Wilmington, Wilmington, North Carolina, USA., Learman DR; Department of Biology, Central Michigan Universitygrid.253856.f, Mt. Pleasant, Michigan, USA.

المصدر: MSphere [mSphere] 2021 Dec 22; Vol. 6 (6), pp. e0077021. Date of Electronic Publication: 2021 Nov 24.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101674533 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2379-5042 (Electronic) Linking ISSN: 23795042 NLM ISO Abbreviation: mSphere Subsets: MEDLINE

مواضيع طبية MeSH: Metagenomics*, Chemoautotrophic Growth/*physiology , Geologic Sediments/*microbiology , Microbiota/*physiology, Antarctic Regions ; Carbon/metabolism ; Carbon Cycle ; Climate Change ; Metagenome/physiology ; Nitrogen/metabolism ; Phylogeny ; Sulfur/metabolism