المؤلفون: Wuestefeld T, Alexandre H. Thiery, Yue Wan, Ramanuj DasGupta, Sarah B. Ng, Lim Khe, Iakovleva, Chiea Chuen Khor, Toh Sy, Tran H, N. Davidson, Poon Syp, Fei Yao, Michael I. Love, Stanojevic D, Loo Jm, Mile Šikić, Li Chen, Ng Hev, Goh Wss, Watten L, Xuewen Ong, Koh Wqc, Yuk Kei Wan, Wee Joo Chng, Hwee Meng Low, Huck-Hui Ng, N.G. Iyer, Ng Hqa, Jia Xu Wang, Yu Q, Christopher Hendra, Harshil Patel, Sawyer C, Alicia Oshlack, Lee Pl, Sim A, J. Goeke, Tan Bop, Wai Leong Tam, Chan Y, L. Xin, Philip Ewels, Chen Y, Ploy N. Pratanwanich

مصطلحات موضوعية: Gene isoform, Transcriptome, Complementary DNA, RNA splicing, Gene expression, RNA, Human genome, Computational biology, Biology, Gene

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::d10ded75394edb3982de936205da7de8
https://doi.org/10.1101/2021.04.21.440736

المؤلفون: Goh WSS; Institute of Molecular Physiology, Shenzhen Bay Laboratory, Shenzhen, China., Kuang Y; Department of Chemical and Biological Engineering, The Hong Kong University of Science and Technology, Hong Kong, China.

المصدر: Biophysical reviews [Biophys Rev] 2023 Oct 17; Vol. 16 (1), pp. 79-87. Date of Electronic Publication: 2023 Oct 17 (Print Publication: 2024).

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Springer Country of Publication: Germany NLM ID: 101498573 Publication Model: eCollection Cited Medium: Print ISSN: 1867-2450 (Print) Linking ISSN: 18672450 NLM ISO Abbreviation: Biophys Rev Subsets: PubMed not MEDLINE

المؤلفون: Hendra C; Institute of Data Science, National University of Singapore, Singapore, Singapore.; Genome Institute of Singapore, A*STAR, Singapore, Singapore.; Department of Statistics and Data Science, National University of Singapore, Singapore, Singapore., Pratanwanich PN; Genome Institute of Singapore, A*STAR, Singapore, Singapore.; Department of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Chulalongkorn, Thailand.; Chula Intelligent and Complex Systems Research Unit, Chulalongkorn University, Chulalongkorn, Thailand., Wan YK; Genome Institute of Singapore, A*STAR, Singapore, Singapore.; Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore., Goh WSS; Institute of Molecular Physiology, Shenzhen Bay Laboratory, Shenzhen, China., Thiery A; Department of Statistics and Data Science, National University of Singapore, Singapore, Singapore. a.h.thiery@nus.edu.sg., Göke J; Genome Institute of Singapore, A*STAR, Singapore, Singapore. gokej@gis.a-star.edu.sg.; Department of Statistics and Data Science, National University of Singapore, Singapore, Singapore. gokej@gis.a-star.edu.sg.; National Cancer Center of Singapore, Singapore, Singapore. gokej@gis.a-star.edu.sg.

المصدر: Nature methods [Nat Methods] 2022 Dec; Vol. 19 (12), pp. 1590-1598. Date of Electronic Publication: 2022 Nov 10.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

مواضيع طبية MeSH: RNA*/genetics , RNA*/metabolism , Nanopore Sequencing*, Sequence Analysis, RNA/methods ; Methylation ; Transcriptome

المؤلفون: Pratanwanich PN; Genome Institute of Singapore, A*STAR, Singapore, Singapore. naruemon.p@chula.ac.th.; Department of Mathematics and Computer Science, Faculty of Science, Chulalongkorn University, Bangkok, Thailand. naruemon.p@chula.ac.th.; Chula Intelligent and Complex Systems Research Unit, Chulalongkorn University, Bangkok, Thailand. naruemon.p@chula.ac.th., Yao F; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Chen Y; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Koh CWQ; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Wan YK; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Hendra C; Genome Institute of Singapore, A*STAR, Singapore, Singapore.; Institute of Data Science, National University of Singapore, Singapore, Singapore., Poon P; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Goh YT; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Yap PML; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Chooi JY; Cancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore., Chng WJ; Cancer Science Institute of Singapore, National University of Singapore, Singapore, Singapore.; NUS Center for Cancer Research and Department of Medicine, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.; Department of Haematology-Oncology, National University Cancer Institute, National University Health System, Singapore, Singapore., Ng SB; Genome Institute of Singapore, A*STAR, Singapore, Singapore., Thiery A; Department of Statistics and Applied Probability, National University of Singapore, Singapore, Singapore., Goh WSS; Genome Institute of Singapore, A*STAR, Singapore, Singapore. shogoh@szbl.ac.cn.; Institute of Molecular Physiology, Shenzhen Bay Laboratory, Shenzhen, China. shogoh@szbl.ac.cn., Göke J; Genome Institute of Singapore, A*STAR, Singapore, Singapore. gokej@gis.a-star.edu.sg.; National Cancer Centre Singapore, Singapore, Singapore. gokej@gis.a-star.edu.sg.

المصدر: Nature biotechnology [Nat Biotechnol] 2021 Nov; Vol. 39 (11), pp. 1394-1402. Date of Electronic Publication: 2021 Jul 19.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Nanopore Sequencing* , Nanopores*, High-Throughput Nucleotide Sequencing ; Humans ; RNA/genetics ; RNA/metabolism ; RNA Processing, Post-Transcriptional/genetics ; Sequence Analysis, RNA/methods ; Transcriptome/genetics

المؤلفون: Goh WSS; Genome Institute of Singapore, Singapore, Singapore. wsgoh@gis.a-star.edu.sg.

المصدر: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2021; Vol. 2198, pp. 369-377.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Humana Press Country of Publication: United States NLM ID: 9214969 Publication Model: Print Cited Medium: Internet ISSN: 1940-6029 (Electronic) Linking ISSN: 10643745 NLM ISO Abbreviation: Methods Mol Biol Subsets: MEDLINE

مواضيع طبية MeSH: Deoxyadenosines/*analysis , Epigenomics/*methods , Sequence Analysis, DNA/*methods, Adenine/analysis ; Adenine/metabolism ; Animals ; Base Sequence ; Cytidine Deaminase/genetics ; Cytidine Deaminase/metabolism ; DNA/genetics ; DNA Methylation/genetics ; Genome, Human ; Humans ; Immunoprecipitation/methods ; Nucleotides ; Proteins/genetics ; Proteins/metabolism ; Single Molecule Imaging/methods ; Sulfites/chemistry

المؤلفون: Goh YT; Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672, Singapore., Koh CWQ; Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672, Singapore., Sim DY; School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore., Roca X; School of Biological Sciences, Nanyang Technological University, Singapore 637551, Singapore., Goh WSS; Genome Institute of Singapore, 60 Biopolis Street, Singapore 138672, Singapore.

المصدر: Nucleic acids research [Nucleic Acids Res] 2020 Sep 18; Vol. 48 (16), pp. 9250-9261.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Adenosine/*analogs & derivatives , Methyltransferases/*genetics , RNA Splicing/*genetics , RNA, Small Nuclear/*genetics, Adenosine/genetics ; Catalysis ; Exons/genetics ; Humans ; Methylation ; RNA Precursors/genetics ; RNA Splice Sites/genetics ; RNA, Messenger/genetics ; Spliceosomes/genetics

المؤلفون: Koh CWQ; Genome Institute of Singapore, 60 Biopolis Street, Singapore, 138672, Singapore., Goh YT; Genome Institute of Singapore, 60 Biopolis Street, Singapore, 138672, Singapore., Goh WSS; Genome Institute of Singapore, 60 Biopolis Street, Singapore, 138672, Singapore. sho.goh.ws@gmail.com.

المصدر: Nature communications [Nat Commun] 2019 Dec 10; Vol. 10 (1), pp. 5636. Date of Electronic Publication: 2019 Dec 10.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Adenine/*analogs & derivatives, Adaptor Proteins, Signal Transducing/metabolism ; Adenine/metabolism ; Alpha-Ketoglutarate-Dependent Dioxygenase FTO ; Base Sequence ; Cross-Linking Reagents/chemistry ; Exonucleases/metabolism ; HEK293 Cells ; Humans ; Methylation ; Methyltransferases/metabolism ; Nuclear Proteins/metabolism ; RNA, Messenger/metabolism

المؤلفون: Koh CWQ; Genome Institute of Singapore, 60 Biopolis Street, Genome, Singapore 138672, Singapore.; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore., Goh YT; Genome Institute of Singapore, 60 Biopolis Street, Genome, Singapore 138672, Singapore.; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore., Toh JDW; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore.; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore., Neo SP; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore., Ng SB; Genome Institute of Singapore, 60 Biopolis Street, Genome, Singapore 138672, Singapore., Gunaratne J; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore., Gao YG; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore.; School of Biological Sciences, Nanyang Technological University, 60 Nanyang Drive, Singapore 637551, Singapore., Quake SR; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore.; Chan Zuckerberg Biohub, 499 Illinois St, San Francisco, CA 94158, USA.; Department of Bioengineering and Applied Physics, Stanford University, Stanford, CA 94305, USA., Burkholder WF; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore.; Chan Zuckerberg Biohub, 499 Illinois St, San Francisco, CA 94158, USA., Goh WSS; Genome Institute of Singapore, 60 Biopolis Street, Genome, Singapore 138672, Singapore.; Institute of Molecular and Cell Biology, 61 Biopolis Drive, Proteos, Singapore 138673, Singapore.

المصدر: Nucleic acids research [Nucleic Acids Res] 2018 Dec 14; Vol. 46 (22), pp. 11659-11670.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Genome, Mitochondrial*, DNA/*genetics , DNA, Mitochondrial/*genetics , DNA-Binding Proteins/*genetics , Deoxyadenosines/*genetics , Mitochondrial Proteins/*genetics, AlkB Homolog 1, Histone H2a Dioxygenase/genetics ; AlkB Homolog 1, Histone H2a Dioxygenase/metabolism ; Bacteriophage lambda/genetics ; Bacteriophage lambda/metabolism ; Base Sequence ; Chromosome Mapping ; DNA/metabolism ; DNA, Mitochondrial/metabolism ; DNA-Binding Proteins/metabolism ; Deoxyadenosines/metabolism ; Escherichia coli/genetics ; Escherichia coli/metabolism ; Exodeoxyribonucleases ; HEK293 Cells ; Humans ; Mitochondrial Proteins/metabolism ; Oxidative Phosphorylation ; Salmonella typhimurium/genetics ; Salmonella typhimurium/metabolism ; Sequence Analysis, DNA ; Viral Proteins/chemistry ; Viral Proteins/metabolism

المؤلفون: Rechavi O; Department of Neurobiology, Wise Faculty of Life Sciences and Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel; Columbia University Medical Center, Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, New York, NY 10032, USA. Electronic address: odedrechavi@gmail.com., Houri-Ze'evi L; Department of Neurobiology, Wise Faculty of Life Sciences and Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel., Anava S; Department of Neurobiology, Wise Faculty of Life Sciences and Sagol School of Neuroscience, Tel Aviv University, Tel Aviv 69978, Israel., Goh WSS; Watson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, Howard Hughes Medical Institute, New York 11724, USA., Kerk SY; Columbia University Medical Center, Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, New York, NY 10032, USA., Hannon GJ; Watson School of Biological Sciences, Cold Spring Harbor Laboratory, Cold Spring Harbor, Howard Hughes Medical Institute, New York 11724, USA., Hobert O; Columbia University Medical Center, Department of Biochemistry and Molecular Biophysics, Howard Hughes Medical Institute, New York, NY 10032, USA.

المصدر: Cell [Cell] 2014 Jul 17; Vol. 158 (2), pp. 277-287. Date of Electronic Publication: 2014 Jul 10.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

مواضيع طبية MeSH: Epigenesis, Genetic*, Caenorhabditis elegans/*physiology , RNA, Small Untranslated/*genetics , RNA, Small Untranslated/*metabolism, Animals ; Caenorhabditis elegans/genetics ; Humans ; Longevity ; Models, Animal ; RNA Interference ; RNA, Helminth/genetics ; RNA, Helminth/metabolism ; Starvation