المؤلفون: Gren BA; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Antczak M; Institute of Computing Science, Poznan University of Technology, Poznan, Poland.; Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland., Zok T; Institute of Computing Science, Poznan University of Technology, Poznan, Poland., Sulkowska JI; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Szachniuk M; Institute of Computing Science, Poznan University of Technology, Poznan, Poland.; Institute of Bioorganic Chemistry, Polish Academy of Sciences, Poznan, Poland.

المصدر: PLoS computational biology [PLoS Comput Biol] 2024 Jun 20; Vol. 20 (6), pp. e1011959. Date of Electronic Publication: 2024 Jun 20 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

مواضيع طبية MeSH: Nucleic Acid Conformation* , RNA*/chemistry , Computational Biology*/methods , Algorithms* , Models, Molecular* , Artifacts*, Machine Learning ; Databases, Protein

المؤلفون: Niemyska W; Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Banacha 2, 02-097 Warsaw, Poland. Electronic address: wanda@mimuw.edu.pl., Mukherjee S; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, Trojdena 4, 02-109 Warsaw, Poland., Gren BA; Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland., Niewieczerzal S; Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland., Bujnicki JM; Laboratory of Bioinformatics and Protein Engineering, International Institute of Molecular and Cell Biology in Warsaw, Trojdena 4, 02-109 Warsaw, Poland. Electronic address: janusz@iimcb.gov.pl., Sulkowska JI; Centre of New Technologies, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland. Electronic address: jsulkowska@cent.uw.edu.pl.

المصدر: Journal of molecular biology [J Mol Biol] 2024 Mar 15; Vol. 436 (6), pp. 168455. Date of Electronic Publication: 2024 Jan 23.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

مواضيع طبية MeSH: RNA*/chemistry , RNA*/genetics , RNA Folding*, Molecular Dynamics Simulation

المؤلفون: Zayats V; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Sikora M; Centre of New Technologies, University of Warsaw, Warsaw, Poland; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland., Perlinska AP; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Stasiulewicz A; Centre of New Technologies, University of Warsaw, Warsaw, Poland; Department of Drug Chemistry, Faculty of Pharmacy, Medical University of Warsaw, Warsaw, Poland., Gren BA; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Sulkowska JI; Centre of New Technologies, University of Warsaw, Warsaw, Poland. Electronic address: jsulkowska@cent.uw.edu.pl.

المصدر: Biophysical journal [Biophys J] 2023 Dec 05; Vol. 122 (23), pp. 4528-4541. Date of Electronic Publication: 2023 Nov 02.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0370626 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1542-0086 (Electronic) Linking ISSN: 00063495 NLM ISO Abbreviation: Biophys J Subsets: MEDLINE

مواضيع طبية MeSH: Protein Folding* , Membrane Transport Proteins*, Protein Conformation ; Membrane Proteins

المؤلفون: Perlinska AP; Centre of New Technologies, University of Warsaw, Warsaw, Poland., Niemyska WH; Centre of New Technologies, University of Warsaw, Warsaw, Poland.; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland., Gren BA; Centre of New Technologies, University of Warsaw, Warsaw, Poland.; Faculty of Physics, University of Warsaw, Warsaw, Poland., Bukowicki M; Faculty of Physics, University of Warsaw, Warsaw, Poland., Nowakowski S; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Warsaw, Poland.; Faculty of Physics, University of Warsaw, Warsaw, Poland., Rubach P; Centre of New Technologies, University of Warsaw, Warsaw, Poland.; Warsaw School of Economics, Warsaw, Poland., Sulkowska JI; Centre of New Technologies, University of Warsaw, Warsaw, Poland.

المصدر: Protein science : a publication of the Protein Society [Protein Sci] 2023 May; Vol. 32 (5), pp. e4631.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print Cited Medium: Internet ISSN: 1469-896X (Electronic) Linking ISSN: 09618368 NLM ISO Abbreviation: Protein Sci Subsets: MEDLINE

مواضيع طبية MeSH: Protein Folding* , Proteome*, Humans ; Protein Conformation

المؤلفون: Niemyska W; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland.; Faculty of Mathematics, Informatics and Mechanics, University of Warsaw, Banacha 2, 02-097 Warsaw, Poland., Rubach P; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland.; Warsaw School of Economics,Al. Niepodleglosci 162, 02-554, Warsaw, Poland., Gren BA; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland., Nguyen ML; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland.; Polish-Japanese Academy of Information Technology, Koszykowa 86, 02-008 Warsaw, Poland., Garstka W; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland.; Inter-faculty Individual Studies in Mathematics and Natural Sciences, University of Warsaw, Banacha 2c, 02-097 Warsaw, Poland., Bruno da Silva F; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland., Rawdon EJ; University of St. Thomas, 2115 Summit Ave, Saint Paul, MN 55105, USA., Sulkowska JI; Centre of New Technologies, University of Warsaw, Banacha 2c, Warsaw, Poland.

المصدر: Nucleic acids research [Nucleic Acids Res] 2022 Jul 05; Vol. 50 (W1), pp. W44-W50.

نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Computers* , Peptides*/chemistry , Protein Conformation*, Models, Molecular ; Proteome ; Databases, Protein

المؤلفون: Dabrowski-Tumanski P, Rubach P, Niemyska W, Gren BA, Sulkowska JI

المصدر: Briefings in bioinformatics [Brief Bioinform] 2021 May 20; Vol. 22 (3).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

مواضيع طبية MeSH: Algorithms* , Molecular Conformation* , Programming Languages* , Software*, Computational Biology/*methods , Polymers/*chemistry, Computer Graphics ; Computer Simulation ; Internet ; Reproducibility of Results