المؤلفون: Streeter SA; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, 37132, USA., Williams AG; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, 37132, USA., Evans JR; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, 37132, USA., Wang J; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, 37203, USA., Guarnaccia AD; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, 37240, USA.; Department of Discovery Oncology, Genentech Inc, South San Francisco, CA, 94080, USA., Florian AC; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, 37240, USA.; Department of Biology, Belmont University, Nashville, TN, 37212, USA., Al-Tobasei R; Department of Computer Science, Middle Tennessee State University, Murfreesboro, TN, 32132, USA., Liu Q; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, 37232, USA.; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, 37203, USA., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, 37240, USA.; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, 37240, USA., Weissmiller AM; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, 37132, USA. april.weissmiller@mtsu.edu.

المصدر: BMC genomics [BMC Genomics] 2024 Apr 11; Vol. 25 (1), pp. 360. Date of Electronic Publication: 2024 Apr 11.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

مواضيع طبية MeSH: Genes, myc* , Neuroblastoma*/metabolism, Humans ; 3-Phosphoinositide-Dependent Protein Kinases/genetics ; 3-Phosphoinositide-Dependent Protein Kinases/metabolism ; Cell Line, Tumor ; Chromosome Segregation ; Gene Expression Regulation, Neoplastic ; Intracellular Signaling Peptides and Proteins/genetics

المؤلفون: Calses PC; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Pham VC; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Guarnaccia AD; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Choi M; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Verschueren E; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Bakker ST; UCSF Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, California, USA., Pham TH; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA., Hinkle T; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Liu C; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA., Chang MT; Department of Bioinformatics, Genentech Inc, South San Francisco, California, USA., Kljavin N; Department of Molecular Oncology, Genentech Inc, South San Francisco, California, USA., Bakalarski C; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA., Haley B; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA., Zou J; Department of Biology, Research Service Division, WuXi AppTec, Shanghai, China., Yan C; Department of Biology, Research Service Division, WuXi AppTec, Shanghai, China., Song X; Department of Biology, Research Service Division, WuXi AppTec, Shanghai, China., Lin X; Department of Biology, Research Service Division, WuXi AppTec, Shanghai, China., Rowntree R; Department of Molecular Oncology, Genentech Inc, South San Francisco, California, USA., Ashworth A; UCSF Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, California, USA., Dey A; Departments of Discovery Oncology, Genentech Inc, South San Francisco, California, USA. Electronic address: anweshad@gene.com., Lill JR; Department of Microchemistry, Proteomics & Lipidomics, Genentech Inc, South San Francisco, California, USA. Electronic address: jlill@gene.com.

المصدر: Molecular & cellular proteomics : MCP [Mol Cell Proteomics] 2023 Feb; Vol. 22 (2), pp. 100496. Date of Electronic Publication: 2023 Jan 12.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 101125647 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-9484 (Electronic) Linking ISSN: 15359476 NLM ISO Abbreviation: Mol Cell Proteomics Subsets: MEDLINE

مواضيع طبية MeSH: DNA Damage* , DNA Repair*/physiology , TEA Domain Transcription Factors*/metabolism, Humans ; Carcinogenesis/metabolism ; DNA-Binding Proteins/metabolism ; Transcription Factors/metabolism

المؤلفون: Guarnaccia AD; Department of Discovery Oncology, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA.; Department of Microchemistry, Proteomics, Lipidomics, and Next Generation Sequencing, Genentech Inc., 1 DNA Way, South San Francisco, CA 94080, USA., Weissmiller AM; Department of Biology, Middle Tennessee State University, Murfreesboro, TN 32132, USA., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA.

المصدر: STAR protocols [STAR Protoc] 2021 Dec 08; Vol. 2 (4), pp. 101000. Date of Electronic Publication: 2021 Dec 08 (Print Publication: 2021).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 101769501 Publication Model: eCollection Cited Medium: Internet ISSN: 2666-1667 (Electronic) Linking ISSN: 26661667 NLM ISO Abbreviation: STAR Protoc Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/analysis , Proteins*/genetics , Proteins*/metabolism, Cell Culture Techniques/*methods , Gene Editing/*methods , Transcription, Genetic/*genetics, CRISPR-Cas Systems ; Cell Line, Tumor ; Cells, Cultured ; Humans ; Proteolysis

المؤلفون: Woodley CM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Romer AS; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, USA., Wang J; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, USA.; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA., Guarnaccia AD; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Elion DL; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Maxwell JN; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, USA., Guerrazzi K; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., McCann TS; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Popay TM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Matlock BK; Vanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN, USA., Flaherty DK; Vanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN, USA., Lorey SL; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA., Liu Q; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, USA.; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN, USA., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN, USA.; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN, USA., Weissmiller AM; Department of Biology, Middle Tennessee State University, Murfreesboro, TN, USA. april.weissmiller@mtsu.edu.

المصدر: Oncogene [Oncogene] 2021 May; Vol. 40 (20), pp. 3593-3609. Date of Electronic Publication: 2021 Apr 30.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 8711562 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-5594 (Electronic) Linking ISSN: 09509232 NLM ISO Abbreviation: Oncogene Subsets: MEDLINE

مواضيع طبية MeSH: Chromosomal Proteins, Non-Histone/*metabolism , Neoplasms/*genetics , Proto-Oncogene Proteins c-myc/*metabolism , SMARCB1 Protein/*metabolism , Transcription Factors/*metabolism, Cell Line ; Cell Line, Tumor ; Chromatin Assembly and Disassembly ; Chromosomal Proteins, Non-Histone/genetics ; HEK293 Cells ; Humans ; Neoplasms/metabolism ; Proto-Oncogene Proteins c-myc/genetics ; SMARCB1 Protein/genetics ; Transcription Factors/genetics

المؤلفون: Guarnaccia AD; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Rose KL; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Wang J; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37232, USA; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, 37232, USA., Zhao B; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Popay TM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Wang CE; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Guerrazzi K; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Hill S; Mass Spectrometry Research Center, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Woodley CM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Hansen TJ; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Lorey SL; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Shaw JG; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Payne WG; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Weissmiller AM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Olejniczak ET; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA., Fesik SW; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Pharmacology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Chemistry, Vanderbilt University, Nashville, TN 37232, USA., Liu Q; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37232, USA; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN, 37232, USA., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. Electronic address: william.p.tansey@vanderbilt.edu.

المصدر: Cell reports [Cell Rep] 2021 Jan 19; Vol. 34 (3), pp. 108636.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE

مواضيع طبية MeSH: Intracellular Signaling Peptides and Proteins/*antagonists & inhibitors, 3-Phosphoinositide-Dependent Protein Kinases/chemistry ; 3-Phosphoinositide-Dependent Protein Kinases/genetics ; 3-Phosphoinositide-Dependent Protein Kinases/metabolism ; Amino Acid Sequence ; Binding Sites ; Drug Discovery ; G2 Phase/genetics ; Gene Expression Regulation ; HEK293 Cells ; Humans ; Immunoprecipitation ; Intracellular Signaling Peptides and Proteins/chemistry ; Intracellular Signaling Peptides and Proteins/genetics ; Models, Molecular ; Molecular Targeted Therapy ; Protein Binding

المؤلفون: Bryan AF; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Wang J; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37240, USA., Howard GC; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Guarnaccia AD; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Woodley CM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Aho ER; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Rellinger EJ; Department of Pediatric General and Thoracic Surgery, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Matlock BK; Vanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN 37240, USA., Flaherty DK; Vanderbilt University Medical Center Flow Cytometry Shared Resource, Vanderbilt University Medical Center, Nashville, TN 37240, USA., Lorey SL; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Chung DH; Department of Pediatric General and Thoracic Surgery, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Fesik SW; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Liu Q; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37240, USA.; Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN 37240, USA., Weissmiller AM; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37240, USA.

المصدر: Nucleic acids research [Nucleic Acids Res] 2020 Apr 06; Vol. 48 (6), pp. 2924-2941.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation*, Intracellular Signaling Peptides and Proteins/*metabolism , Protein Biosynthesis/*genetics, Base Sequence ; Binding Sites/genetics ; Cell Line ; Chromatin/metabolism ; Conserved Sequence/genetics ; Female ; Humans ; Male ; Protein Binding ; Transcription, Genetic ; Tumor Suppressor Protein p53/metabolism

المؤلفون: Guarnaccia AD; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. alissa.d.guarnaccia@vanderbilt.edu., Tansey WP; Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. william.p.tansey@vanderbilt.edu.

المصدر: Journal of clinical medicine [J Clin Med] 2018 Jan 30; Vol. 7 (2). Date of Electronic Publication: 2018 Jan 30.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101606588 Publication Model: Electronic Cited Medium: Print ISSN: 2077-0383 (Print) Linking ISSN: 20770383 NLM ISO Abbreviation: J Clin Med Subsets: PubMed not MEDLINE