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1دورية أكاديمية
المؤلفون: Hari B Kamadurai, Yu Qiu, Alan Deng, Joseph S Harrison, Chris MacDonald, Marcelo Actis, Patrick Rodrigues, Darcie J Miller, Judith Souphron, Steven M Lewis, Igor Kurinov, Naoaki Fujii, Michal Hammel, Robert Piper, Brian Kuhlman, Brenda A Schulman
المصدر: eLife, Vol 2 (2013)
مصطلحات موضوعية: ubiquitin, HECT, E3 ligase, E2 conjugating enzyme, NEDD4, Rsp5, Medicine, Science, Biology (General), QH301-705.5
وصف الملف: electronic resource
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المؤلفون: Emmanuel Lemichez, Brenda A. Schulman, Zhenyue Hao, Sachdev S. Sidhu, Nan Li, Ryan Murchie, Wei Zhang, Maria A. Sartori, Kuen-Phon Wu, Jason Moffat, John R. Walker, Avinash Persaud, Yi Sheng, Alban Ordureau, Jicheng Hu, Chong Jiang, Manjeet Mukherjee, Kevin R. Brown, Yufeng Tong, Yanjun Li, Junjie Chen, Anne Doye, Peter Y. Mercredi, Daniela Rotin, Hari B. Kamadurai, J. Wade Harper
المساهمون: Donnelly Center Cellular and Biomolecular Research [Univ. Toronto], University of Toronto, St Jude Children's Research Hospital, Department of Cell Biology, Harvard Medical School [Boston] (HMS), Program in Cell Biology [Toronto], The Hospital for sick children [Toronto] (SickKids)-Department of Biochemistry [University of Toronto], University of Toronto-University of Toronto, Structural Genomics Consortium, The University of Texas M.D. Anderson Cancer Center [Houston], Centre méditerranéen de médecine moléculaire (C3M), Université Nice Sophia Antipolis (... - 2019) (UNS), COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-COMUE Université Côte d'Azur (2015-2019) (COMUE UCA)-Université Côte d'Azur (UCA)-Institut National de la Santé et de la Recherche Médicale (INSERM), University of York [York, UK], Campbell Family Institute for Breast Cancer Research, University Health Network, Department of Pharmacology and Toxicology [Toronto], Department of Molecular Genetics [Toronto], The Donnelly Centre for Cellular and Biomolecular Research [Toronto, ON, Canada] (CCBR), J.W.H. was supported by NIH (R37NS083524 and GM095567). A.O. was supported by an Edward R. and Anne G. Lefler Center postdoctoral fellowship. J.W.H. is a consultant for Millennium: the Takada Oncology Company and Biogen. D.R. holds a Canada Research Chair (Tier 1 in Biochemistry and Signal Transduction) and was supported by CIHR (MOP#130422). B.A.S. is an investigator of the Howard Hughes Medical Institute (HHMI) and was supported by ALSAC, NIH R37GM065930 and P30CA021765. NECAT and APS were supported by NIH P41 GM103403 and DOE Contract DE-AC02-06CH11357. W.Z. was supported by a CIHR postdoctoral fellowship. S.S.S. and J.M. were supported by CIHR (MOP#111149 and 136956). The Structural Genomics Consortium (SGC) is a registered charity (number 1097737) that receives funds from AbbVie, Bayer Pharma AG, Boehringer Ingelheim, Canada Foundation for Innovation, Eshelman Institute for Innovation, Genome Canada, Innovative Medicines Initiative (EU/EFPIA) (ULTRA-DD grant no. 115766), Janssen, Merck & Co., Novartis Pharma AG, Ontario Ministry of Economic Development and Innovation, Pfizer, São Paulo Research Foundation-FAPESP, Takeda, and the Wellcome Trust., We thank members of the Sidhu and Schulman groups for helpful comments. We thank Andrew Vorobyov, Eva Chou, Yogesh Hooda, Jun Gu, and Aiping Dong for technical assistance. We are indebted to Pankaj Garg, Andreas Ernst, Abiodun Ogunjimi, Clare Jeon, Satra Nim, Frank Sicheri, and Hongrui Wang for reagents and advice.
المصدر: Molecular Cell
Molecular Cell, Elsevier, 2016, 62 (1), pp.121-136. ⟨10.1016/j.molcel.2016.02.005⟩مصطلحات موضوعية: Models, Molecular, 0301 basic medicine, Subfamily, [SDV]Life Sciences [q-bio], MESH: Catalytic Domain, NEDD4, [SDV.BC.BC]Life Sciences [q-bio]/Cellular Biology/Subcellular Processes [q-bio.SC], MESH: Ubiquitin/chemistry, MESH: Ubiquitin/metabolism, Madin Darby Canine Kidney Cells, MESH: Dogs, Ubiquitin, Cell Movement, Catalytic Domain, [SDV.BC.IC]Life Sciences [q-bio]/Cellular Biology/Cell Behavior [q-bio.CB], MESH: Animals, MESH: Cell Movement, chemistry.chemical_classification, MESH: Organoids/metabolism, biology, MESH: Ubiquitin-Protein Ligases/chemistry, Cell migration, Cell biology, MESH: Ubiquitin/genetics, Organoids, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, MESH: Models, Molecular, MESH: HCT116 Cells, Ubiquitin-Protein Ligases, [SDV.BC]Life Sciences [q-bio]/Cellular Biology, macromolecular substances, Cell Line, 03 medical and health sciences, Dogs, Peptide Library, Animals, Humans, Molecular Biology, NEDD4L, DNA ligase, MESH: Humans, MESH: Organoids/cytology, MESH: Madin Darby Canine Kidney Cells, MESH: Ubiquitin-Protein Ligases/metabolism, Cell Biology, HCT116 Cells, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, MESH: Cell Line, 030104 developmental biology, chemistry, biology.protein, MESH: Peptide Library, Genetic screen
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المؤلفون: Nathan T. Jui, Guy A. Caldwell, Jean-Christophe Rochet, Alex K. Lancaster, Mitali A. Tambe, Daniel F. Tardiff, Vikram Khurana, Hyoung Tae Kim, Stephen L. Buchwald, Kim A. Caldwell, Susan Lindquist, Chee Yeun Chung, Michelle L. Thompson, Hari B. Kamadurai
المصدر: Science. 342:979-983
مصطلحات موضوعية: Saccharomyces cerevisiae Proteins, Endosome, Nedd4 Ubiquitin Protein Ligases, Ubiquitin-Protein Ligases, Saccharomyces cerevisiae, Drug Evaluation, Preclinical, Druggability, NEDD4, Small Molecule Libraries, chemistry.chemical_compound, Animals, Gene Regulatory Networks, Caenorhabditis elegans, Cells, Cultured, Neurons, Alpha-synuclein, Multidisciplinary, Endosomal Sorting Complexes Required for Transport, biology, Ubiquitin-Protein Ligase Complexes, Neurodegenerative Diseases, Parkinson Disease, biology.organism_classification, Rats, Ubiquitin ligase, Cell biology, Neuroprotective Agents, Biochemistry, chemistry, Cytoprotection, Endosomal transport, alpha-Synuclein, biology.protein, Benzimidazoles, Genetic screen
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::03574d4533ec8d38948ba06045ee96c9
https://doi.org/10.1126/science.1245321 -
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المؤلفون: Darcie J. Miller, David M. Duda, Robert C. Piper, Judith Souphron, Hari B. Kamadurai, Daniel C. Scott, Daniel K. Stringer, Brenda A. Schulman
المصدر: Molecular Cell. 36:1095-1102
مصطلحات موضوعية: Models, Molecular, HECT domain, Nedd4 Ubiquitin Protein Ligases, Ubiquitin-Protein Ligases, Molecular Sequence Data, macromolecular substances, Crystallography, X-Ray, Article, 03 medical and health sciences, 0302 clinical medicine, Protein structure, Ubiquitin, Catalytic Domain, Humans, Molecular Biology, 030304 developmental biology, 0303 health sciences, Endosomal Sorting Complexes Required for Transport, biology, C-terminus, Active site, Cell Biology, Protein Structure, Tertiary, 3. Good health, Ubiquitin ligase, Biochemistry, Ubiquitin-Conjugating Enzymes, biology.protein, Biophysics, 030217 neurology & neurosurgery, Cysteine
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المؤلفون: Mark P. Foster, Hari B. Kamadurai, Srisunder Subramaniam
المصدر: Journal of Molecular Biology. 370:303-314
مصطلحات موضوعية: Models, Molecular, Binding Sites, Integrases, HMG-box, Stereochemistry, Cooperativity, DNA, DNA-binding domain, Biology, Bacteriophage lambda, Article, Protein Structure, Tertiary, DNA binding site, chemistry.chemical_compound, chemistry, Biochemistry, Structural Biology, Catalytic Domain, Mutation, Recombinase, Binding site, Molecular Biology, Binding domain
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المؤلفون: Kuen-Phon Wu, Brenda A. Schulman, Christopher Riling, Paula M. Oliver, Claire E. O’Leary, Hari B. Kamadurai, Mingjie Ying, Suresh Kumar, Erica E. Manion
مصطلحات موضوعية: Nedd4 Ubiquitin Protein Ligases, Ubiquitin-Protein Ligases, Amino Acid Motifs, Repressor, WWP2, NEDD4, macromolecular substances, Protein degradation, Biology, Biochemistry, Jurkat Cells, Mice, Ubiquitin, immune system diseases, parasitic diseases, otorhinolaryngologic diseases, Animals, Humans, skin and connective tissue diseases, Molecular Biology, Endosomal Sorting Complexes Required for Transport, Membrane Proteins, Cell Biology, eye diseases, Ubiquitin ligase, Protein Structure, Tertiary, Repressor Proteins, biology.protein, Intercellular Signaling Peptides and Proteins, Carrier Proteins, Cysteine
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e1fbc3640794bc1d7385c2800fa0eb44
https://europepmc.org/articles/PMC4583040/ -
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المؤلفون: Hari B. Kamadurai, Mark P. Foster, R. Benjamin Jones, Kari B. Green-Church, Srisunder Subramaniam
المصدر: Protein Science. 12:620-626
مصطلحات موضوعية: DNA, Bacterial, Protein Folding, Conformational change, Magnetic Resonance Spectroscopy, HMG-box, Protein Conformation, Electrospray ionization, Molecular Sequence Data, Mass spectrometry, Biochemistry, Substrate Specificity, Structure-Activity Relationship, chemistry.chemical_compound, Catalytic Domain, Holliday junction, Amino Acid Sequence, Molecular Biology, Binding Sites, Integrases, Sequence Homology, Amino Acid, Chemistry, Oligonucleotide, Circular Dichroism, Bacteriophage lambda, Crystallography, Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization, For the Record, Biophysics, Protein folding, DNA, Protein Binding
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المؤلفون: Chris MacDonald, Michal Hammel, Brenda A. Schulman, Judith Souphron, Robert C. Piper, Igor Kurinov, Brian Kuhlman, Steven M. Lewis, Marcelo Actis, Hari B. Kamadurai, Joseph S. Harrison, Patrick Rodrigues, Alan Deng, Darcie J. Miller, Naoaki Fujii, Yu Qiu
مصطلحات موضوعية: Prioritization, Ubiquitin, biology, Mechanism (biology), Chemistry, Lysine, biology.protein, Ligation, Cell biology
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::3c45978dbbfe34e92ab767029324b0c5
https://doi.org/10.7554/elife.00828.023 -
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المؤلفون: Brenda A. Schulman, Joseph S. Harrison, Hari B. Kamadurai, Brian Kuhlman, Patrick Rodrigues, Judith Souphron, Steven M. Lewis, Naoaki Fujii, Igor Kurinov, Marcelo Actis, Alan Deng, Robert C. Piper, Chris MacDonald, Darcie J. Miller, Michal Hammel, Yu Qiu
المصدر: eLife
eLife, Vol 2 (2013)مصطلحات موضوعية: HECT domain, Ubiquitylation, QH301-705.5, Protein Conformation, HECT, Science, Ubiquitin-Protein Ligases, Molecular Sequence Data, S. cerevisiae, NEDD4, macromolecular substances, Ubiquitin-conjugating enzyme, Biochemistry, General Biochemistry, Genetics and Molecular Biology, Deubiquitinating enzyme, 03 medical and health sciences, Protein structure, Ubiquitin, Catalytic Domain, Rsp5, Amino Acid Sequence, Biology (General), E2 conjugating enzyme, E3 ligase, 030304 developmental biology, 0303 health sciences, General Immunology and Microbiology, biology, Sequence Homology, Amino Acid, General Neuroscience, Lysine, 030302 biochemistry & molecular biology, General Medicine, Biophysics and Structural Biology, 3. Good health, Ubiquitin ligase, Cell biology, Mutagenesis, biology.protein, Medicine, sense organs, Insight
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المؤلفون: Mark P. Foster, Rinku Jain, Hari B. Kamadurai
المصدر: Acta crystallographica. Section F, Structural biology and crystallization communications. 64(Pt 6)
مصطلحات موضوعية: DNA, Bacterial, Models, Molecular, Protein Folding, Molecular Sequence Data, Biophysics, Crystallography, X-Ray, Biochemistry, Catalysis, Protein Structure, Secondary, Domain (software engineering), chemistry.chemical_compound, X-Ray Diffraction, Structural Biology, Catalytic Domain, Genetics, Protein Structure Communications, Molecular replacement, Amino Acid Sequence, biology, Integrases, Osmolar Concentration, Condensed Matter Physics, Bacteriophage lambda, Integrase, Protein Structure, Tertiary, Crystallography, chemistry, biology.protein, Protein folding, Crystallization, Linker, DNA, Binding domain, Protein Binding