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المؤلفون: Gulati M; Department of Molecular and Cell Biology, University of California Merced, Merced, CA, USA., Thomas JM; Department of Biology, California State University-Fresno, Fresno, CA, USA., Ennis CL; Department of Molecular and Cell Biology, University of California Merced, Merced, CA, USA; Quantitative and Systems Biology Graduate Program, University of California, Merced, CA, USA., Hernday AD; Department of Molecular and Cell Biology, University of California Merced, Merced, CA, USA; Health Sciences Research Institute, University of California, Merced, CA, USA., Rawat M; Department of Biology, California State University-Fresno, Fresno, CA, USA. Electronic address: mrawat@csufresno.edu., Nobile CJ; Department of Molecular and Cell Biology, University of California Merced, Merced, CA, USA; Health Sciences Research Institute, University of California, Merced, CA, USA. Electronic address: cnobile@ucmerced.edu.

المصدر: Microbial pathogenesis [Microb Pathog] 2024 Jun; Vol. 191, pp. 106657. Date of Electronic Publication: 2024 Apr 20.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 8606191 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-1208 (Electronic) Linking ISSN: 08824010 NLM ISO Abbreviation: Microb Pathog Subsets: MEDLINE

مواضيع طبية MeSH: Biofilms*/growth & development , Staphylococcus aureus*/physiology , Staphylococcus aureus*/genetics , Glucosamine*/analogs & derivatives , Glucosamine*/metabolism , Cysteine*/analogs & derivatives , Cysteine*/metabolism , Nitric Oxide*/metabolism, Sodium Nitrite/pharmacology ; Bacterial Proteins/metabolism ; Bacterial Proteins/genetics ; Mycobacterium smegmatis/genetics ; Mycobacterium smegmatis/physiology ; Mycobacterium smegmatis/metabolism ; Mutation ; Humans ; Oxidoreductases/metabolism ; Oxidoreductases/genetics ; Sulfhydryl Compounds/metabolism ; Oxidative Stress

المؤلفون: Li R; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America., Rozum JC; Department of Systems Science and Industrial Engineering, Binghamton University (State University of New York), Binghamton, New York, United States of America., Quail MM; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America., Qasim MN; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, California, United States of America., Sindi SS; Department of Applied Mathematics, University of California, Merced, Merced, California, United States of America., Nobile CJ; Department of Molecular Cell Biology, University of California, Merced, Merced, California, United States of America.; Health Sciences Research Institute, University of California, Merced, Merced, California, United States of America., Albert R; Department of Physics, Pennsylvania State University, University Park, University Park, Pennsylvania, United States of America.; Department of Biology, Pennsylvania State University, University Park, University Park, Pennsylvania, United States of America., Hernday AD; Department of Molecular Cell Biology, University of California, Merced, Merced, California, United States of America.; Health Sciences Research Institute, University of California, Merced, Merced, California, United States of America.

المصدر: PLoS computational biology [PLoS Comput Biol] 2023 Aug 22; Vol. 19 (8), pp. e1010991. Date of Electronic Publication: 2023 Aug 22 (Print Publication: 2023).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101238922 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7358 (Electronic) Linking ISSN: 1553734X NLM ISO Abbreviation: PLoS Comput Biol Subsets: MEDLINE

مواضيع طبية MeSH: Gene Regulatory Networks*/genetics , Algorithms*, Bayes Theorem ; Biological Evolution ; Candida albicans/genetics ; RNA, Messenger

المؤلفون: Conrad KA; Department of Sciences, John Jay College of the City, University of New York, New York, NY 10019, USA., Kim H; Department of Sciences, John Jay College of the City, University of New York, New York, NY 10019, USA., Qasim M; Department of Molecular and Cellular Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA., Djehal A; Higher National School of Biotechnology of Constantine, Constantine 25100, Algeria.; Laboratory of Regenerative Nanomedicine, Center of Research and Biomedicine, University of Strasbourg, 67000 Strasbourg, France., Hernday AD; Department of Molecular and Cellular Biology, School of Natural Sciences, University of California, Merced, CA 95343, USA., Désaubry L; Laboratory of Regenerative Nanomedicine, Center of Research and Biomedicine, University of Strasbourg, 67000 Strasbourg, France., Rauceo JM; Department of Sciences, John Jay College of the City, University of New York, New York, NY 10019, USA.

المصدر: Pathogens (Basel, Switzerland) [Pathogens] 2023 Jan 12; Vol. 12 (1). Date of Electronic Publication: 2023 Jan 12.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101596317 Publication Model: Electronic Cited Medium: Print ISSN: 2076-0817 (Print) Linking ISSN: 20760817 NLM ISO Abbreviation: Pathogens Subsets: PubMed not MEDLINE

المؤلفون: Qasim MN; Department of Molecular and Cell Biology, University of California, Merced; Quantitative and Systems Biology Graduate Program, University of California, Merced., Valle Arevalo A; Department of Molecular and Cell Biology, University of California, Merced; Quantitative and Systems Biology Graduate Program, University of California, Merced., Paropkari AD; Department of Molecular and Cell Biology, University of California, Merced; Quantitative and Systems Biology Graduate Program, University of California, Merced., Ennis CL; Department of Molecular and Cell Biology, University of California, Merced; Quantitative and Systems Biology Graduate Program, University of California, Merced; Health Sciences Research Institute, University of California, Merced., Sindi SS; Department of Applied Mathematics, University of California, Merced., Nobile CJ; Department of Molecular and Cell Biology, University of California, Merced; Health Sciences Research Institute, University of California, Merced; cnobile@ucmerced.edu., Hernday AD; Department of Molecular and Cell Biology, University of California, Merced; Health Sciences Research Institute, University of California, Merced; ahernday@ucmerced.edu.

المصدر: Journal of visualized experiments : JoVE [J Vis Exp] 2022 Apr 01 (182). Date of Electronic Publication: 2022 Apr 01.

نوع المنشور: Journal Article; Video-Audio Media; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: MYJoVE Corporation Country of Publication: United States NLM ID: 101313252 Publication Model: Electronic Cited Medium: Internet ISSN: 1940-087X (Electronic) Linking ISSN: 1940087X NLM ISO Abbreviation: J Vis Exp Subsets: MEDLINE

مواضيع طبية MeSH: Candida albicans*/genetics , Candida albicans*/metabolism , Transcription Factors*/genetics , Transcription Factors*/metabolism, DNA/metabolism ; Data Analysis ; Endonucleases ; High-Throughput Nucleotide Sequencing ; Humans ; Workflow

المؤلفون: Ennis CL; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, California, USA.; Quantitative and Systems Biology Graduate Program, University of California, Mercedgrid.266096.d, California, USA.; Health Sciences Research Institute, University of California, Mercedgrid.266096.d, California, USA., Hernday AD; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, California, USA.; Health Sciences Research Institute, University of California, Mercedgrid.266096.d, California, USA., Nobile CJ; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, California, USA.; Health Sciences Research Institute, University of California, Mercedgrid.266096.d, California, USA.

المصدر: Microbiology spectrum [Microbiol Spectr] 2021 Dec 22; Vol. 9 (3), pp. e0182021. Date of Electronic Publication: 2021 Nov 03.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE

مواضيع طبية MeSH: Antifungal Agents/*pharmacology , Candida auris/*genetics , Caspofungin/*pharmacology , Drug Resistance, Multiple, Fungal/*genetics , Gene Editing/*methods , Transcription Factors/*genetics, CRISPR-Cas Systems/genetics ; Candida auris/drug effects ; Candidiasis/drug therapy ; Gene Deletion ; Genome, Fungal/genetics ; Humans ; Microbial Sensitivity Tests

المؤلفون: Seher TD; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, CA 95343, USA., Nguyen N; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, CA 95343, USA., Ramos D; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, CA 95343, USA., Bapat P; Quantitative and Systems Biology Graduate Program, University of California, Merced, Merced, CA 95343, USA., Nobile CJ; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, CA 95343, USA.; Health Sciences Research Institute, University of California, Merced, Merced, CA 95343, USA., Sindi SS; Health Sciences Research Institute, University of California, Merced, Merced, CA 95343, USA.; Department of Applied Mathematics, School of Natural Sciences, University of California, Merced, Merced, CA 95343, USA., Hernday AD; Department of Molecular and Cell Biology, School of Natural Sciences, University of California, Merced, Merced, CA 95343, USA.; Health Sciences Research Institute, University of California, Merced, Merced, CA 95343, USA.

المصدر: G3 (Bethesda, Md.) [G3 (Bethesda)] 2021 Sep 06; Vol. 11 (9).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101566598 Publication Model: Print Cited Medium: Internet ISSN: 2160-1836 (Electronic) Linking ISSN: 21601836 NLM ISO Abbreviation: G3 (Bethesda) Subsets: MEDLINE

مواضيع طبية MeSH: CRISPR-Cas Systems* , Gene Editing*, Genetic Engineering ; Genomics ; Software

المؤلفون: Qasim MN; Department of Molecular and Cell Biology, University of California-Merced, Merced, CA 95343, USA.; Quantitative and Systems Biology Graduate Program, University of California-Merced, Merced, CA 95343, USA., Valle Arevalo A; Department of Molecular and Cell Biology, University of California-Merced, Merced, CA 95343, USA.; Quantitative and Systems Biology Graduate Program, University of California-Merced, Merced, CA 95343, USA., Nobile CJ; Department of Molecular and Cell Biology, University of California-Merced, Merced, CA 95343, USA.; Health Sciences Research Institute, University of California-Merced, Merced, CA 95343, USA., Hernday AD; Department of Molecular and Cell Biology, University of California-Merced, Merced, CA 95343, USA.; Health Sciences Research Institute, University of California-Merced, Merced, CA 95343, USA.

المصدر: Journal of fungi (Basel, Switzerland) [J Fungi (Basel)] 2021 Jan 09; Vol. 7 (1). Date of Electronic Publication: 2021 Jan 09.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101671827 Publication Model: Electronic Cited Medium: Internet ISSN: 2309-608X (Electronic) Linking ISSN: 2309608X NLM ISO Abbreviation: J Fungi (Basel) Subsets: PubMed not MEDLINE