المؤلفون: Ortega OO; Chemical and Physical Biology Program, Vanderbilt University, Nashville, TN 37212, USA., Ozen M; Department of Biochemistry, Vanderbilt University, Nashville, TN 37212, USA.; Multiscale Modeling Group, Comp. Bio. Hub, Altos Laboratories, Redwood City, CA 94065, USA., Wilson BA; Department of Biochemistry, Vanderbilt University, Nashville, TN 37212, USA., Pino JC; Department of Biochemistry, Vanderbilt University, Nashville, TN 37212, USA., Irvin MW; Department of Biochemistry, Vanderbilt University, Nashville, TN 37212, USA., Ildefonso GV; Chemical and Physical Biology Program, Vanderbilt University, Nashville, TN 37212, USA., Garbett SP; Department of Biostatistics, Vanderbilt University Medical Center, Nashville, TN 37203, USA., Lopez CF; Department of Biochemistry, Vanderbilt University, Nashville, TN 37212, USA.; Multiscale Modeling Group, Comp. Bio. Hub, Altos Laboratories, Redwood City, CA 94065, USA.

المصدر: IScience [iScience] 2024 May 16; Vol. 27 (6), pp. 109989. Date of Electronic Publication: 2024 May 16 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 101724038 Publication Model: eCollection Cited Medium: Internet ISSN: 2589-0042 (Electronic) Linking ISSN: 25890042 NLM ISO Abbreviation: iScience Subsets: PubMed not MEDLINE

المؤلفون: Ildefonso GV; Alfred E. Mann Department of Biomedical Engineering, University of Southern California, Los Angeles, California, USA., Finley SD; Alfred E. Mann Department of Biomedical Engineering, University of Southern California, Los Angeles, California, USA. sfinley@usc.edu.; Department of Quantitative and Computational Biology, University of Southern California, Los Angeles, California, USA. sfinley@usc.edu.; Mork Family Department of Chemical Engineering and Materials Science, University of Southern California, Los Angeles, California, USA. sfinley@usc.edu.

المصدر: NPJ systems biology and applications [NPJ Syst Biol Appl] 2023 Jul 31; Vol. 9 (1), pp. 36. Date of Electronic Publication: 2023 Jul 31.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group in partnership with SBI, The Systems Biology Institute Country of Publication: England NLM ID: 101677786 Publication Model: Electronic Cited Medium: Internet ISSN: 2056-7189 (Electronic) Linking ISSN: 20567189 NLM ISO Abbreviation: NPJ Syst Biol Appl Subsets: MEDLINE

مواضيع طبية MeSH: T-Cell Exhaustion* , Neoplasms*/genetics , Neoplasms*/metabolism, Humans ; CD8-Positive T-Lymphocytes/metabolism ; Cell Differentiation/genetics ; Lymphocyte Activation

المؤلفون: Ildefonso GV; Chemical and Physical Biology Program, Vanderbilt University School of Medicine, Nashville, Tennessee., Oliver Metzig M; Department of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, California; Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, California., Hoffmann A; Department of Microbiology, Immunology and Molecular Genetics, University of California, Los Angeles, California; Institute for Quantitative and Computational Biosciences, University of California, Los Angeles, California., Harris LA; Department of Biomedical Engineering, University of Arkansas, Fayetteville, Arkansas; Interdisciplinary Graduate Program in Cell and Molecular Biology, University of Arkansas, Fayetteville, Arkansas; Cancer Biology Program, Winthrop P. Rockefeller Cancer Institute, University of Arkansas for Medical Sciences, Little Rock, Arkansas. Electronic address: harrisl@uark.edu., Lopez CF; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, Tennessee; Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, Tennessee; Department of Biomedical Informatics, Vanderbilt University Medical Center, Nashville, Tennessee. Electronic address: c.lopez@vanderbilt.edu.

المصدر: Biophysical journal [Biophys J] 2023 Mar 07; Vol. 122 (5), pp. 817-834. Date of Electronic Publication: 2023 Jan 28.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0370626 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1542-0086 (Electronic) Linking ISSN: 00063495 NLM ISO Abbreviation: Biophys J Subsets: MEDLINE

مواضيع طبية MeSH: Necroptosis* , Cues*, Humans ; Necrosis/metabolism ; Necrosis/pathology ; Bayes Theorem ; Tumor Necrosis Factor-alpha/pharmacology ; Apoptosis

المؤلفون: Groves SM; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA., Ildefonso GV; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA., McAtee CO; Department of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37235, USA., Ozawa PMM; Department of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37235, USA., Ireland AS; Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA., Stauffer PE; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA., Wasdin PT; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA., Huang X; Utah Center for Genetic Discovery, Eccles Institute of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA., Qiao Y; Utah Center for Genetic Discovery, Eccles Institute of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA., Lim JS; Department of Pediatrics and Genetics, Stanford University, Stanford, CA 94305, USA., Bader J; Department of Pathology, Microbiology, and Immunology, Vanderbilt Center for Immunobiology, Vanderbilt University Medical Center, Nashville, TN 37232, USA., Liu Q; Department of Biostatistics and Center for Quantitative Sciences, Vanderbilt University Medical Center, Nashville, TN 37235, USA., Simmons AJ; Epithelial Biology Center and Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37235, USA., Lau KS; Epithelial Biology Center and Department of Cell and Developmental Biology, Vanderbilt University School of Medicine, Nashville, TN 37235, USA., Iams WT; Division of Hematology-Oncology, Department of Medicine, Vanderbilt University Medical Center, Nashville, TN 37235, USA., Hardin DP; Department of Mathematics and Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37235, USA., Saff EB; Department of Mathematics, Vanderbilt University, Nashville, TN 37235, USA., Holmes WR; Department of Mathematics, Vanderbilt University, Nashville, TN 37235, USA; Department of Physics, Vanderbilt University, Nashville, TN 37235, USA., Tyson DR; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA., Lovly CM; Department of Mathematics and Department of Biomedical Informatics, Vanderbilt University, Nashville, TN 37235, USA; Vanderbilt-Ingram Cancer Center, Vanderbilt University Medical Center, Nashville, TN 37235, USA., Rathmell JC; Department of Pathology, Microbiology, and Immunology, Vanderbilt Center for Immunobiology, Vanderbilt University Medical Center, Nashville, TN 37232, USA., Marth G; Utah Center for Genetic Discovery, Eccles Institute of Human Genetics, University of Utah, Salt Lake City, UT 84112, USA., Sage J; Department of Pediatrics and Genetics, Stanford University, Stanford, CA 94305, USA., Oliver TG; Department of Oncological Sciences, Huntsman Cancer Institute, University of Utah, Salt Lake City, UT 84112, USA., Weaver AM; Department of Cell and Developmental Biology, Vanderbilt University, Nashville, TN 37235, USA; Department of Pathology, Microbiology, and Immunology, Vanderbilt University, Nashville, TN 37235, USA., Quaranta V; Department of Biochemistry, Vanderbilt University, Nashville, TN 37235, USA. Electronic address: vito.quaranta@vanderbilt.edu.

المصدر: Cell systems [Cell Syst] 2022 Sep 21; Vol. 13 (9), pp. 690-710.e17. Date of Electronic Publication: 2022 Aug 17.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 101656080 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2405-4720 (Electronic) Linking ISSN: 24054712 NLM ISO Abbreviation: Cell Syst Subsets: MEDLINE

مواضيع طبية MeSH: Lung Neoplasms*/genetics , Lung Neoplasms*/pathology , Small Cell Lung Carcinoma*/genetics , Small Cell Lung Carcinoma*/metabolism , Small Cell Lung Carcinoma*/pathology, Cell Plasticity ; Humans