المؤلفون: Ingolia, NT, Brar, GA, Rouskin, S, McGeachy, AM, Weissman, JS

المصدر: Current protocols in molecular biology, vol Chapter 4, iss SUPPL.103
Current protocols in molecular biology, vol Chapter 4, iss 1
Ingolia, NT; Brar, GA; Rouskin, S; McGeachy, AM; & Weissman, JS. (2013). Genome-wide annotation and quantitation of translation by ribosome profiling. Current Protocols in Molecular Biology, (SUPPL.103). doi: 10.1002/0471142727.mb0418s103. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/646057r6

مصطلحات موضوعية: Biochemistry & Molecular Biology, Time Factors, Underpinning research, Generic Health Relevance, Gene Expression Profiling, Protein Biosynthesis, 1.1 Normal biological development and functioning, Human Genome, Genetics, Computational Biology, High-Throughput Nucleotide Sequencing, Ribosomes

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::20180f5ec843566a6ae306b7210806e2
https://escholarship.org/uc/item/646057r6

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المؤلفون: Kim JW; Department of Molecular and Cell Biology at the University of California, Berkeley, Berkeley, CA, USA., Yong AJH; Department of Physiology at the University of California, San Francisco, San Francisco, CA, USA.; Howard Hughes Medical Institute at the University of California, San Francisco, San Francisco, CA, USA., Aisenberg EE; Helen Wills Neuroscience Institute at the University of California, Berkeley, Berkeley, CA, USA., Lobel JH; Department of Molecular and Cell Biology at the University of California, Berkeley, Berkeley, CA, USA., Wang W; Department of Chemistry at the University of Illinois, Chicago, Chicago, IL, USA., Dawson TM; Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Dawson VL; Institute for Cell Engineering, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Gao R; Department of Chemistry at the University of Illinois, Chicago, Chicago, IL, USA., Jan YN; Department of Physiology at the University of California, San Francisco, San Francisco, CA, USA.; Howard Hughes Medical Institute at the University of California, San Francisco, San Francisco, CA, USA., Bateup HS; Department of Molecular and Cell Biology at the University of California, Berkeley, Berkeley, CA, USA.; Helen Wills Neuroscience Institute at the University of California, Berkeley, Berkeley, CA, USA.; Chan Zuckerberg Biohub, San Francisco, CA, USA., Ingolia NT; Department of Molecular and Cell Biology at the University of California, Berkeley, Berkeley, CA, USA. ingolia@berkeley.edu.

المصدر: Nature chemical biology [Nat Chem Biol] 2024 Jul; Vol. 20 (7), pp. 894-905. Date of Electronic Publication: 2024 Apr 24.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101231976 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1552-4469 (Electronic) Linking ISSN: 15524450 NLM ISO Abbreviation: Nat Chem Biol Subsets: MEDLINE

مواضيع طبية MeSH: Calcium*/metabolism , Neurons*/metabolism , Calcium Signaling* , Biotinylation*, Animals ; Carbon-Nitrogen Ligases/metabolism ; Carbon-Nitrogen Ligases/chemistry ; Humans ; Mice ; HEK293 Cells ; Repressor Proteins ; Escherichia coli Proteins

المؤلفون: Lobel JH; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA., Ingolia NT; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.; Lead contact.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jun 22. Date of Electronic Publication: 2024 Jun 22.

نوع المنشور: Journal Article; Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Diamond PD; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA., McGlincy NJ; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA., Ingolia NT; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA; Center for Computational Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, Berkeley, CA 94720, USA. Electronic address: ingolia@berkeley.edu.

المصدر: Molecular cell [Mol Cell] 2024 Jun 06; Vol. 84 (11), pp. 2119-2134.e5.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 9802571 Publication Model: Print Cited Medium: Internet ISSN: 1097-4164 (Electronic) Linking ISSN: 10972765 NLM ISO Abbreviation: Mol Cell Subsets: MEDLINE

مواضيع طبية MeSH: Eukaryotic Initiation Factor-4E*/metabolism , Eukaryotic Initiation Factor-4E*/genetics , Saccharomyces cerevisiae Proteins*/genetics , Saccharomyces cerevisiae Proteins*/metabolism , Protein Biosynthesis* , Amino Acids*/metabolism , Saccharomyces cerevisiae*/genetics , Saccharomyces cerevisiae*/metabolism , Gene Expression Regulation, Fungal*, RNA, Messenger/metabolism ; RNA, Messenger/genetics ; 5' Untranslated Regions ; Basic-Leucine Zipper Transcription Factors/metabolism ; Basic-Leucine Zipper Transcription Factors/genetics ; Cyclins/genetics ; Cyclins/metabolism ; Poly(A)-Binding Proteins/metabolism ; Poly(A)-Binding Proteins/genetics

المؤلفون: Shichino Y; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan. yuichi.shichino@riken.jp., Yamaguchi T; Department of Biochemistry and Metabolic Science, Akita University Graduate School of Medicine, Akita, Japan.; Department of Pharmacology, Kyushu University Graduate School of Medical Sciences, Fukuoka, Japan., Kashiwagi K; Laboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan., Mito M; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan., Takahashi M; Laboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan., Ito T; Laboratory for Translation Structural Biology, RIKEN Center for Biosystems Dynamics Research, Yokohama, Japan., Ingolia NT; Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA., Kuba K; Department of Biochemistry and Metabolic Science, Akita University Graduate School of Medicine, Akita, Japan.; Department of Pharmacology, Kyushu University Graduate School of Medical Sciences, Fukuoka, Japan., Iwasaki S; RNA Systems Biochemistry Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan. shintaro.iwasaki@riken.jp.; Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan. shintaro.iwasaki@riken.jp.

المصدر: Nature structural & molecular biology [Nat Struct Mol Biol] 2024 May 21. Date of Electronic Publication: 2024 May 21.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101186374 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1545-9985 (Electronic) Linking ISSN: 15459985 NLM ISO Abbreviation: Nat Struct Mol Biol Subsets: MEDLINE

المؤلفون: Fernandez SG; https://ror.org/01an7q238 Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA., Ferguson L; https://ror.org/01an7q238 Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.; https://ror.org/01an7q238 Center for Computational Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, CA, USA., Ingolia NT; https://ror.org/01an7q238 Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA ingolia@berkeley.edu.; https://ror.org/01an7q238 Center for Computational Biology and California Institute for Quantitative Biosciences, University of California, Berkeley, CA, USA.

المصدر: Life science alliance [Life Sci Alliance] 2024 May 21; Vol. 7 (7). Date of Electronic Publication: 2024 May 21 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Life Science Alliance, LLC Country of Publication: United States NLM ID: 101728869 Publication Model: Electronic-Print Cited Medium: Internet ISSN: 2575-1077 (Electronic) Linking ISSN: 25751077 NLM ISO Abbreviation: Life Sci Alliance Subsets: MEDLINE

مواضيع طبية MeSH: Protein Isoforms*/metabolism , Protein Isoforms*/genetics , Ribosomes*/metabolism , CCAAT-Enhancer-Binding Protein-alpha*/metabolism , CCAAT-Enhancer-Binding Protein-alpha*/genetics , Protein Biosynthesis*, Humans ; RNA, Messenger/genetics ; RNA, Messenger/metabolism ; Animals ; Peptide Chain Initiation, Translational ; Mice ; TOR Serine-Threonine Kinases/metabolism ; HEK293 Cells

المؤلفون: Lobel JH; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA., Ingolia NT; Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA 94720, USA.; Lead contact.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Feb 05. Date of Electronic Publication: 2024 Feb 05.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE