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1دورية أكاديمية
المؤلفون: John P Zepecki, David Karambizi, J Eduardo Fajardo, Kristin M Snyder, Charlotte Guetta-Terrier, Oliver Y Tang, Jia-Shu Chen, Atom Sarkar, Andras Fiser, Steven A Toms, Nikos Tapinos
المصدر: PLoS Genetics, Vol 17, Iss 3, p e1009086 (2021)
وصف الملف: electronic resource
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المؤلفون: Charlotte Guetta-Terrier, David Karambizi, Bedia Akosman, John P. Zepecki, Jia-Shu Chen, Suchitra Kamle, J. Eduardo Fajardo, Andras Fiser, Ritambhara Singh, Steven A. Toms, Chun Geun Lee, Jack A. Elias, Nikos Tapinos
المصدر: Cancer Research.
مصطلحات موضوعية: Cancer Research, Oncology
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::618b7700eb3d01f7b7259322367a45f6
https://doi.org/10.1158/0008-5472.can-21-3629 -
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المؤلفون: J. Eduardo Fajardo, Steven Grudman, Andras Fiser
المصدر: Bioinformatics
مصطلحات موضوعية: Statistics and Probability, Physics, Source code, Interface (Java), media_common.quotation_subject, Biochemistry, Applications Notes, Computer Science Applications, Computational Mathematics, symbols.namesake, Computational Theory and Mathematics, Hyperplane, Chemical physics, Atom, symbols, Molecule, Van der Waals radius, Voronoi diagram, Molecular Biology, media_common, Macromolecule
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::44dda4aa5d8f2303927b55e40a7fe92d
https://pubmed.ncbi.nlm.nih.gov/34499117 -
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المؤلفون: J. Eduardo Fajardo, Andras Fiser
المصدر: Structure
مصطلحات موضوعية: Heel, Protein Conformation, medicine.drug_class, Computer science, Hemagglutinin Glycoproteins, Influenza Virus, Workload, Computational biology, Molecular Dynamics Simulation, Protein Engineering, Monoclonal antibody, Proof of Concept Study, Peptides, Cyclic, Biophysical Phenomena, Article, Madin Darby Canine Kidney Cells, Epitopes, 03 medical and health sciences, Dogs, Influenza A Virus, H1N1 Subtype, Structural Biology, Influenza, Human, medicine, Animals, Humans, Molecular Biology, 030304 developmental biology, 0303 health sciences, 030302 biochemistry & molecular biology, Antibodies, Monoclonal, Antibodies, Neutralizing, Complementarity Determining Regions, Therapeutic modalities, medicine.anatomical_structure, Drug Design, Binding Sites, Antibody, Large size
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5da0462e1129fb7ec378c16c202549e2
https://pubmed.ncbi.nlm.nih.gov/32610044 -
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المؤلفون: Steven A. Toms, Nikos Tapinos, Atom Sarkar, Kristin M. Snyder, Andras Fiser, J. Eduardo Fajardo, Oliver Y. Tang, Jia-Shu Chen, David Karambizi, John P. Zepecki, Charlotte Guetta-Terrier
مصطلحات موضوعية: Transcriptome, Tumor suppressor gene, Glioma, Cellular differentiation, microRNA, medicine, Translation (biology), Ribosome profiling, Stem cell, Biology, medicine.disease, Cell biology
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::1c0bdf6ad726c3a8c45c60ae27315de6
https://doi.org/10.1101/2020.08.28.271536 -
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المؤلفون: Bohdan Monastyrskyy, Juri Rappsilber, Krzysztof Fidelis, J. Eduardo Fajardo, Mikhail Karasikov, Alexander Leitner, Agnieszka S. Karczyńska, Andras Fiser, Adam Belsom, Silvia Crivelli, Emilia A. Lubecka, Celina Sikorska, Andriy Kryshtafovych, Nelson Gil, Cezary Czaplewski, Rojan Shrestha, Esben Trabjerg, Sergei Grudinin, Guillaume Pagès, Adam Liwo, Adam K. Sieradzan
المساهمون: Department of Systems & Computational Biology [New York], Albert Einstein College of Medicine [New York], Department of Biochemistry [New York], Institut für Biotechnologie [berlin], Technische Universität Berlin (TU), Department of Computer Science [Davis] (UC Davis), University of California [Davis] (UC Davis), University of California-University of California, Department of Environmental Analytics [Univ Gdańsk], Faculty of Chemistry [Univ Gdańsk], University of Gdańsk (UG)-University of Gdańsk (UG), Genome Center [UC Davis], Algorithms for Modeling and Simulation of Nanosystems (NANO-D), Inria Grenoble - Rhône-Alpes, Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)-Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Laboratoire Jean Kuntzmann (LJK ), Institut polytechnique de Grenoble - Grenoble Institute of Technology (Grenoble INP )-Institut National de Recherche en Informatique et en Automatique (Inria)-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])-Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019]), Moscow Institute of Physics and Technology [Moscow] (MIPT), Skolkovo Institute of Science and Technology [Moscow] (Skoltech), Department of Computer Science [ETH Zürich] (D-INFK), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Institute of Molecular Systems Biology [Zurich], Korea Institute for Advanced Study (KIAS), Institute of Mathematics [Univ Gdańsk], University of Gdańsk (UG), Wellcome Trust Centre for Cell Biology, University of Edinburgh, Technical University of Berlin / Technische Universität Berlin (TU), Department of Computer Science [Univ California Davis] (CS - UC Davis), University of California (UC)-University of California (UC), Algorithms for Modeling and Simulating Nanosystems [2018-...] (NANO-D-POST [2018-2020]), Institut National de Recherche en Informatique et en Automatique (Inria)-Institut National de Recherche en Informatique et en Automatique (Inria)
المصدر: Proteins-Structure, Function and Bioinformatics
Proteins-Structure, Function and Bioinformatics, Wiley, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1283-1297. ⟨10.1002/prot.25816⟩
Proteins
Proteins-Structure, Function and Bioinformatics, 2019, Critical Assessment of Methods of Protein Structure Prediction (CASP) Special Issue, 87 (12), pp.1283-1297. ⟨10.1002/prot.25816⟩
Fajardo, J E, Shrestha, R, Gil, N, Belsom, A, Crivelli, S N, Czaplewski, C, Fidelis, K, Grudinin, S, Karasikov, M, Karczyńska, A S, Kryshtafovych, A, Leitner, A, Liwo, A, Lubecka, E A, Monastyrskyy, B, Pagès, G, Rappsilber, J, Sieradzan, A K, Sikorska, C, Trabjerg, E & Fiser, A 2019, ' Assessment of chemical-crosslink-assisted protein structure modeling in CASP13 ', Proteins: Structure, Function, and Bioinformatics, vol. 87, no. 12, pp. 1283-1297 . https://doi.org/10.1002/prot.25816مصطلحات موضوعية: CASP13, Models, Molecular, Computer science, Protein Conformation, Context (language use), Computational biology, Routine practice, 010402 general chemistry, Mass spectrometry, Machine learning, computer.software_genre, 01 natural sciences, Biochemistry, Article, [PHYS.PHYS.PHYS-COMP-PH]Physics [physics]/Physics [physics]/Computational Physics [physics.comp-ph], 03 medical and health sciences, Protein structure, chemical-crosslink-assisted protein structure modeling, Structural Biology, Tandem Mass Spectrometry, Molecular Biology, 030304 developmental biology, 0303 health sciences, Chemistry, business.industry, 030302 biochemistry & molecular biology, Model protein, Computational Biology, Proteins, Reproducibility of Results, 0104 chemical sciences, [SDV.BBM.BP]Life Sciences [q-bio]/Biochemistry, Molecular Biology/Biophysics, Workflow, Cross-Linking Reagents, Models, Chemical, chemical crosslinking/mass spectrometry, Critical assessment, Artificial intelligence, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], business, Protein structure modeling, computer, Function (biology), Algorithms, Chromatography, Liquid
وصف الملف: application/pdf
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المصدر: PLoS Computational Biology
PLoS Computational Biology, Vol 15, Iss 1, p e1006704 (2019)مصطلحات موضوعية: 0301 basic medicine, Protein Conformation, Physiology, Protein Structure Prediction, Molecular Docking Simulation, Biochemistry, Receptor-Ligand Binding Assay, Binding Analysis, 0302 clinical medicine, Protein structure, Mathematical and Statistical Techniques, Immune Physiology, Macromolecular Structure Analysis, Medicine and Health Sciences, Biochemical Simulations, Biology (General), Databases, Protein, Immune System Proteins, Ecology, Chemistry, Protein protein, Statistics, Protein structure prediction, Computational Theory and Mathematics, Modeling and Simulation, Physical Sciences, Algorithms, Protein Binding, Research Article, Protein Structure, QH301-705.5, Immunology, Computational biology, Research and Analysis Methods, Antibodies, Protein–protein interaction, 03 medical and health sciences, Cellular and Molecular Neuroscience, Genetics, Binding site, Statistical Methods, Protein Interactions, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Chemical Characterization, Binding Sites, Computational Biology, Proteins, Biology and Life Sciences, 030104 developmental biology, ROC Curve, Docking (molecular), Protein-Protein Interactions, 030217 neurology & neurosurgery, Mathematics, Protein ligand, Forecasting
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المؤلفون: Rodrigo G, Ducati, Hilda A, Namanja-Magliano, Rajesh K, Harijan, J Eduardo, Fajardo, Andras, Fiser, Johanna P, Daily, Vern L, Schramm
المصدر: Proceedings of the National Academy of Sciences of the United States of America. 115(9)
مصطلحات موضوعية: Models, Molecular, Antimalarials, Adenosine, Pyrrolidines, Purine-Nucleoside Phosphorylase, Protein Conformation, parasitic diseases, Plasmodium falciparum, Drug Resistance, Point Mutation, Genomics, Enzyme Inhibitors, Biological Sciences
URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::085876a4a81dc060d8df21786c228f5e
https://pubmed.ncbi.nlm.nih.gov/29440412 -
9دورية أكاديمية
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المؤلفون: Tarun Gheyi, Marc E. Rutter, Subramanyam Swaminathan, Ursula Pieper, David Baker, Xun Zhao, Stephen K. Burley, Andras Fiser, Andrej Sali, D.A. Thompson, Zhenzhen Li, J. Michael Sauder, Steven C. Almo, J. Eduardo Fajardo, J. Gilmore, Shane Atwell, Mark R. Chance, Frances Lu, J. Spencer Emtage, Kenneth D. Schwinn, P. Sampathkumar, S.R. Wasserman, Kevin Bain, Jeffrey B. Bonanno
المصدر: Proteins: Structure, Function, and Bioinformatics. 78:3056-3062
مصطلحات موضوعية: biology, Membrane permeability, Operon, Pseudomonas, Pseudomonas fluorescens, biology.organism_classification, Biochemistry, Transmembrane protein, Structural Biology, Porin, Molecular Biology, Peptide sequence, Integral membrane protein