المؤلفون: Katja N Rybakova, Frank J Bruggeman, Aleksandra Tomaszewska, Martijn J Moné, Carsten Carlberg, Hans V Westerhoff

المصدر: PLoS Computational Biology, Vol 11, Iss 4, p e1004236 (2015)

مصطلحات موضوعية: Biology (General), QH301-705.5

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC4409292?pdf=render; https://doaj.org/toc/1553-734X; https://doaj.org/toc/1553-7358

URL الوصول: https://doaj.org/article/7a423745c54b4acf83b02400e4a836f8

المؤلفون: Joke Blom, Carsten Carlberg, Frank J. Bruggeman, Katja N. Rybakova, Aleksandra Tomaszewska, Simon van Mourik, Hans V. Westerhoff

المساهمون: Molecular Cell Physiology, Systems Bioinformatics, Mathematics, AIMMS, Synthetic Systems Biology (SILS, FNWI), Evolutionary Intelligence

المصدر: Nucleic Acids Research
Nucleic Acids Research, 153-161. Oxford University Press
ISSUE=43;STARTPAGE=153;ENDPAGE=161;ISSN=0305-1048;TITLE=Nucleic Acids Research
Nucleic Acids Research, 43(1), 153-161. Oxford University Press
Rybakova, E N, Tomaszewska, A, van Mourik, A, Blom, J, Westerhoff, H V, Carlberg, C & Bruggeman, F J 2015, ' Tracing the molecular basis of transcriptional dynamics in noisy data by using an experiment-based mathematical model. ', Nucleic Acids Research, no. 43, 1, pp. 153-161 . https://doi.org/10.1093/nar/gku1272
Nucleic acids research
Nucleic acids research, 43(1), 153-161
Nucleic acids research 43 (2015) 1

مصطلحات موضوعية: Transcription, Genetic, receptor, RNA Splicing, RNA Stability, Farm Technology, elongation, Biology, parameter-estimation, Perilipin-2, Cell Line, Tumor, Gene expression, Genetics, adrp expression, Humans, Epigenetics, RNA, Messenger, Gene, Transcription factor, Regulation of gene expression, Messenger RNA, promoter, Models, Genetic, Gene regulation, Chromatin and Epigenetics, RNA, Membrane Proteins, gene-expression, Cell biology, networks, RNA splicing, differentiation-related protein, cells, Agrarische Bedrijfstechnologie, rna degradation

وصف الملف: application/pdf; application/octet-stream

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d90581f1a1a3882229874215d4450f73
https://doi.org/10.1093/nar/gku1272

المؤلفون: Tatjana Degenhardt, Katja N. Rybakova, Aleksandra Tomaszewska, Martijn J. Moné, Hans V. Westerhoff, Frank J. Bruggeman, Carsten Carlberg

المصدر: Journal of End-to-End-testing. 138:489-501

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::39d3a659e4f58993fb0a50fe91836341
https://doi.org/10.1016/s9999-9994(09)20388-6

المؤلفون: Barbara M. Bakker, Martijn J. Moné, Hanna M. Härdin, Alexey Kolodkin, Hans van Leeuwen, Jacky L. Snoep, Klaas Krab, Marco Eijken, Frank J. Bruggeman, Riaan Conradie, Stephen J. Wilkinson, Katja N. Rybakova, Jan H. van Schuppen, Hans V. Westerhoff

المساهمون: Molecular Cell Physiology, Mathematical Analysis, Mathematics, Internal Medicine

المصدر: Westerhoff, H V, Kolodkin, A N, Conradie, R, Wilkinson, S J, Bruggeman, F J, Krab, K, Schuppen, J H, Hardin, H M, Bakker, B M, Mone, M J, Rybakova, E N, Eijken, M, van Leeuwen, J P & Snoep, J L 2009, ' Systems Biology towards life in silico: mathematics of the control of living cells. ', Journal of Mathematical Biology, vol. 58, pp. 7-34 . https://doi.org/10.1007/s00285-008-0160-8
Journal of Mathematical Biology, 58, 7-34. Springer Verlag
Journal of Mathematical Biology, 58(1-2), 7-34. Springer-Verlag
Westerhoff, H V, Kolodkin, A, Conradie, R, Wilkinson, S J, Bruggeman, F J, Krab, K, van Schuppen, J H, Hardin, H, Bakker, B M, Moné, M J, Rybakova, K N, Eijken, M, van Leeuwen, H J P & Snoep, J L 2009, ' Systems biology towards life in silico : mathematics of the control of living cells ', Journal of Mathematical Biology, vol. 58, no. 1-2, pp. 7-34 . https://doi.org/10.1007/s00285-008-0160-8

مصطلحات موضوعية: Mathematical and theoretical biology, Systems Biology, Applied Mathematics, In silico, Systems biology, Models, Biological, Agricultural and Biological Sciences (miscellaneous), Flux balance analysis, Kinetics, Systems analysis, Modeling and Simulation, Metabolic control analysis, Biophysics, Metabolomics, Thermodynamics, Biological system, Control (linguistics), Function (biology), Signal Transduction, Mathematics

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36889fd3574c120799520fceae6b637d
https://hdl.handle.net/1871/27365

المؤلفون: Martijn J. Moné, Hans V. Westerhoff, Frank J. Bruggeman, Aleksandra Tomaszewska, Carsten Carlberg, Katja N. Rybakova

المساهمون: Terveystieteiden tiedekunta, Molecular Cell Physiology, Systems Bioinformatics, Mathematics, AIMMS, Synthetic Systems Biology (SILS, FNWI)

المصدر: PLoS Computational Biology
PLoS Computational Biology, 11(4). Public Library of Science
Rybakova, E N, Bruggeman, F J, Tomaszewska, A, Mone, M J, Carlberg, C & Westerhoff, H V 2015, ' Multiplex Eukaryotic Transcription (In)activation: Timing, Bursting and Cycling of a Ratchet Clock Mechanism ', PLoS Computational Biology, vol. 11, no. 4 . https://doi.org/10.1371/journal.pcbi.1004236
PLoS Computational Biology, Vol 11, Iss 4, p e1004236 (2015)

مصطلحات موضوعية: Transcriptional Activation, Histone-modifying enzymes, Transcription, Genetic, Transcription coregulator, Biology, Chromatin remodeling, Cellular and Molecular Neuroscience, Biological Clocks, Genetics, Computer Simulation, RNA, Messenger, Scaffold/matrix attachment region, lcsh:QH301-705.5, Molecular Biology, Ecology, Evolution, Behavior and Systematics, ChIA-PET, Models, Statistical, Models, Genetic, Ecology, General transcription factor, Eukaryotic transcription, Chromatin, Cell biology, lcsh:Biology (General), Computational Theory and Mathematics, Modeling and Simulation, Transcription Factors, Research Article

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::90c5b60e151cc7cf8f0b50111a52cfee
https://doi.org/10.1371/journal.pcbi.1004236

المؤلفون: Katja N. Rybakova, Anne Schwabe, Maciej Dobrzyński, Pernette J. Verschure, Frank J. Bruggeman

مصطلحات موضوعية: Genetics, Molecular network, medicine.anatomical_structure, Current cell, Evolutionary biology, Systems biology, Survival strategy, Cell, medicine, Biology, Intracellular, Noise propagation

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::2153d6ffedcb3c4aa1696c2cec004f6f
https://doi.org/10.1016/b978-0-12-385118-5.00028-1

المؤلفون: Katja N. Rybakova, Martijn J. Moné, Hans V. Westerhoff, Frank J. Bruggeman, Alexey Kolodkin

المصدر: Nuclear Receptors ISBN: 9789048133024

مصطلحات موضوعية: Molecular network, Mathematical and theoretical biology, Development (topology), Mathematical model, Systems biology, Metabolic network, Computational biology, Molecular systems, Biology, Data science

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::81f01d615a95c70995b1e2d1b358e55b
https://doi.org/10.1007/978-90-481-3303-1_18

المؤلفون: Hans V. Westerhoff, Aleksandra Tomaszewska, Martijn J. Moné, Tatjana Degenhardt, Katja N. Rybakova, Carsten Carlberg, Frank J. Bruggeman

المساهمون: Molecular Cell Physiology

المصدر: Degenhardt, T, Rybakova, E N, Tomaszewska, A, Mone, M J, Westerhoff, H V, Bruggeman, F J & Carlberg, C 2009, ' Population-level transcription cycles derive from stochastic timing of single-cell transcription. ', Cell, vol. 138, pp. 489-501 . https://doi.org/10.1016/j.cell.2009.05.029
Cell, 138, 489-501. Cell Press

مصطلحات موضوعية: Regulation of gene expression, Messenger RNA, education.field_of_study, Time Factors, biology, Models, Genetic, Transcription, Genetic, Biochemistry, Genetics and Molecular Biology(all), Eukaryotic transcription, Population, Pyruvate Dehydrogenase Acetyl-Transferring Kinase, Protein Serine-Threonine Kinases, General Biochemistry, Genetics and Molecular Biology, Cell biology, Cell Line, Histone, Gene Expression Regulation, Transcription (biology), Gene expression, biology.protein, Humans, PPAR delta, Transcription Initiation Site, education, Gene

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3d3d0cf9913be4e2954ee83efdbb9b5e

المؤلفون: Anne Schwabe, Frank J. Bruggeman, Katja N. Rybakova

المصدر: Biophysical Journal. (6):1152-1161

مصطلحات موضوعية: Regulation of gene expression, Genetics, Stochastic Processes, Time Factors, Models, Genetic, Transcription, Genetic, RNA Stability, Eukaryotic transcription, Response element, Gene Dosage, Biophysics, Gene regulatory network, Computational biology, Biology, Gene Expression Regulation, Cell Biophysics, Bacterial transcription, Transcriptional regulation, RNA, Messenger, Transcription factor, Probability, Cis-regulatory module

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0454449499e54d4f2ecbeabdb0e3f789