المؤلفون: Liu N; Interdepartmental Graduate Program in Marine Science, University of California Santa Barbara, Santa Barbara, California, USA., Kivenson V; Interdepartmental Graduate Program in Marine Science, University of California Santa Barbara, Santa Barbara, California, USA., Peng X; Marine Science Institute, University of California Santa Barbara, Santa Barbara, California, USA., Cui Z; Marine Bioresource and Environment Research Center, Key Laboratory of Marine Eco-Environmental Science and Technology, First Institute of Oceanography, Ministry of Natural Resources of China, Qingdao, China., Lankiewicz TS; Department of Chemical Engineering, University of California, Santa Barbara, California, USA., Gosselin KM; Interdepartmental Graduate Program in Marine Science, University of California Santa Barbara, Santa Barbara, California, USA., English CJ; Marine Science Institute, University of California Santa Barbara, Santa Barbara, California, USA.; Department of Ecology Evolution, and Marine Biology, University of California, Santa Barbara, California, USA., Blair EM; Department of Chemical Engineering, University of California, Santa Barbara, California, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, California, USA.; Biological Engineering Program, University of California, Santa Barbara, California, USA., Valentine DL; Marine Science Institute, University of California Santa Barbara, Santa Barbara, California, USA.; Department of Earth Science, University of California Santa Barbara, Santa Barbara, California, USA.

المصدر: Applied and environmental microbiology [Appl Environ Microbiol] 2024 Feb 21; Vol. 90 (2), pp. e0091423. Date of Electronic Publication: 2024 Jan 24.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Bacteria, Anaerobic*/metabolism , Alteromonadaceae*/genetics, Anaerobiosis ; Base Composition ; RNA, Ribosomal, 16S/genetics ; RNA, Ribosomal, 16S/metabolism ; Phylogeny ; Sequence Analysis, DNA ; Polysaccharides/metabolism ; Carrageenan ; DNA, Bacterial/analysis ; Fatty Acids ; Bacterial Typing Techniques

المؤلفون: Leggieri PA; Department of Chemical Engineering, University of California, Santa Barbara, CA 93106, USA., Blair EM; Department of Chemical Engineering, University of California, Santa Barbara, CA 93106, USA., Lankiewicz TS; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA 93106, USA; Joint BioEnergy Institute (JBEI), Emeryville, CA 94608, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, CA 93106, USA; Joint BioEnergy Institute (JBEI), Emeryville, CA 94608, USA; Biological Engineering Program, University of California, Santa Barbara, CA 93106, USA. Electronic address: momalley@ucsb.edu.

المصدر: Bioresource technology [Bioresour Technol] 2024 Jan; Vol. 391 (Pt A), pp. 129854. Date of Electronic Publication: 2023 Oct 18.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Applied Science Country of Publication: England NLM ID: 9889523 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-2976 (Electronic) Linking ISSN: 09608524 NLM ISO Abbreviation: Bioresour Technol Subsets: MEDLINE

مواضيع طبية MeSH: Acetates* , Lactates*, Fermentation ; Anaerobiosis ; Formates/metabolism ; Ethanol/metabolism ; Fungi/metabolism

المؤلفون: Lankiewicz TS; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA.; Department of Ecology, Evolution, and Marine Biology, University of California Santa Barbara, Santa Barbara, CA, USA.; Joint BioEnergy Institute, Emeryville, CA, USA., Choudhary H; Joint BioEnergy Institute, Emeryville, CA, USA.; Department of Biomaterials and Biomanufacturing, Sandia National Laboratories, Livermore, CA, USA., Gao Y; Joint BioEnergy Institute, Emeryville, CA, USA.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Amer B; Joint BioEnergy Institute, Emeryville, CA, USA., Lillington SP; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA., Leggieri PA; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA., Brown JL; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA., Swift CL; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA.; Department of Environmental Health Sciences, University of South Carolina, Columbia, SC, USA., Lipzen A; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Na H; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Amirebrahimi M; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Theodorou MK; Department of Agriculture and Environment, Harper Adams University, Newport, UK., Baidoo EEK; Joint BioEnergy Institute, Emeryville, CA, USA.; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Barry K; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Grigoriev IV; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA, USA., Timokhin VI; Great Lakes Bioenergy Research Center, Madison, WI, USA., Gladden J; Joint BioEnergy Institute, Emeryville, CA, USA.; Department of Biomaterials and Biomanufacturing, Sandia National Laboratories, Livermore, CA, USA., Singh S; Joint BioEnergy Institute, Emeryville, CA, USA.; Department of Biomaterials and Biomanufacturing, Sandia National Laboratories, Livermore, CA, USA., Mortimer JC; Joint BioEnergy Institute, Emeryville, CA, USA.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.; School of Agriculture, Food and Wine, Waite Research Institute, University of Adelaide, Glen Osmond, South Australia, Australia., Ralph J; Great Lakes Bioenergy Research Center, Madison, WI, USA.; Department of Biochemistry, University of Wisconsin Madison, Madison, WI, USA., Simmons BA; Joint BioEnergy Institute, Emeryville, CA, USA.; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Singer SW; Joint BioEnergy Institute, Emeryville, CA, USA.; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., O'Malley MA; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, CA, USA. momalley@ucsb.edu.; Joint BioEnergy Institute, Emeryville, CA, USA. momalley@ucsb.edu.

المصدر: Nature microbiology [Nat Microbiol] 2023 Apr; Vol. 8 (4), pp. 596-610. Date of Electronic Publication: 2023 Mar 09.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Lignin*/metabolism , Cellulose*/metabolism, Anaerobiosis ; Biomass ; Fungi/genetics ; Fungi/metabolism

المؤلفون: Lankiewicz TS; Department of Chemical Engineering, University of California, Santa Barbara, California, USA.; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, California, USA.; Joint BioEnergy Institute, Emeryville, California, USA., Lillington SP; Department of Chemical Engineering, University of California, Santa Barbara, California, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, California, USA.; Joint BioEnergy Institute, Emeryville, California, USA.

المصدر: Microbiology and molecular biology reviews : MMBR [Microbiol Mol Biol Rev] 2022 Dec 21; Vol. 86 (4), pp. e0004122. Date of Electronic Publication: 2022 Jul 19.

نوع المنشور: Journal Article; Review; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 9706653 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5557 (Electronic) Linking ISSN: 10922172 NLM ISO Abbreviation: Microbiol Mol Biol Rev Subsets: MEDLINE

مواضيع طبية MeSH: Lignin*/metabolism , Fungi*/genetics , Fungi*/metabolism, Anaerobiosis ; Biomass

المؤلفون: Leggieri PA; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Kerdman-Andrade C; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Lankiewicz TS; Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA, 93106, USA.; Joint BioEnergy Institute (JBEI), Emeryville, CA, 94608, USA., Valentine MT; Department of Mechanical Engineering, University of California, Santa Barbara, CA, 93106, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA. momalley@ucsb.edu.; Joint BioEnergy Institute (JBEI), Emeryville, CA, 94608, USA. momalley@ucsb.edu.

المصدر: Microbial cell factories [Microb Cell Fact] 2021 Oct 18; Vol. 20 (1), pp. 199. Date of Electronic Publication: 2021 Oct 18.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 101139812 Publication Model: Electronic Cited Medium: Internet ISSN: 1475-2859 (Electronic) Linking ISSN: 14752859 NLM ISO Abbreviation: Microb Cell Fact Subsets: MEDLINE

مواضيع طبية MeSH: Coculture Techniques/*methods , Fungi/*growth & development , Rumen/*microbiology, Anaerobiosis ; Animals ; Carbohydrate Metabolism

المؤلفون: Peng X; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA.; Marine Science Institute, University of California, Santa Barbara, CA, USA., Wilken SE; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA., Lankiewicz TS; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA.; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Gilmore SP; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA., Brown JL; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA., Henske JK; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA., Swift CL; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA., Salamov A; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Barry K; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Grigoriev IV; Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Theodorou MK; Department of Animal Production, Welfare and Veterinary Sciences, Harper Adams University, Newport, UK., Valentine DL; Department of Earth Science, University of California, Santa Barbara, CA, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, CA, USA. momalley@ucsb.edu.; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. momalley@ucsb.edu.

المصدر: Nature microbiology [Nat Microbiol] 2021 Apr; Vol. 6 (4), pp. 499-511. Date of Electronic Publication: 2021 Feb 01.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Gastrointestinal Microbiome*/drug effects , Gastrointestinal Microbiome*/genetics , Microbial Consortia*/drug effects , Microbial Consortia*/genetics, Bacteria, Anaerobic/*metabolism , Fungi/*metabolism , Lignin/*metabolism, Anaerobiosis ; Animals ; Anti-Bacterial Agents/pharmacology ; Archaea/classification ; Archaea/drug effects ; Archaea/genetics ; Archaea/metabolism ; Bacteria, Anaerobic/classification ; Bacteria, Anaerobic/drug effects ; Bacteria, Anaerobic/genetics ; Biomass ; Cellulose/metabolism ; Feces/microbiology ; Fungi/classification ; Fungi/genetics ; Goats ; Metabolome ; Metagenome ; Methane/metabolism ; Phylogeny

المؤلفون: Bayer B; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA. bbayer@ucsb.edu., Saito MA; Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA., McIlvin MR; Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA., Lücker S; Department of Microbiology, IWWR, Radboud University, Nijmegen, The Netherlands., Moran DM; Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA., Lankiewicz TS; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA., Dupont CL; J. Craig Venter Institute, La Jolla, CA, USA., Santoro AE; Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA. asantoro@ucsb.edu.

المصدر: The ISME journal [ISME J] 2021 Apr; Vol. 15 (4), pp. 1025-1039. Date of Electronic Publication: 2020 Nov 23.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101301086 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1751-7370 (Electronic) Linking ISSN: 17517362 NLM ISO Abbreviation: ISME J Subsets: MEDLINE

مواضيع طبية MeSH: Ecosystem* , Nitrites*, Bacteria ; Oxidation-Reduction ; Oxygen ; Proteomics

SCR Organism: Nitrospira marina

المؤلفون: Wilken SE; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, California, USA., Monk JM; Department of Bioengineering, University of California San Diego, San Diego, California, USA., Leggieri PA; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, California, USA., Lawson CE; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, California, USA.; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Lankiewicz TS; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, California, USA.; Department of Evolution Ecology and Marine Biology, University of California Santa Barbara, Santa Barbara, California, USA., Seppälä S; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, California, USA., Daum CG; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Jenkins J; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; HudsonAlpha Institute of Biotechnology, Huntsville, Alabama, USA., Lipzen AM; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Mondo SJ; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Barry KW; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA., Grigoriev IV; US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.; Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, California, USA., Henske JK; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, California, USA., Theodorou MK; Agriculture Centre for Sustainable Energy Systems, Animal Production, Department of Agriculture and the Environment, Harper Adams University, Newport, United Kingdom., Palsson BO; Department of Bioengineering, University of California San Diego, San Diego, California, USA.; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, California, USA., Petzold LR; Department of Computer Science, University of California Santa Barbara, Santa Barbara, California, USA., O'Malley MA; Department of Chemical Engineering, University of California Santa Barbara, Santa Barbara, California, USA momalley@ucsb.edu.; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory, Emeryville, California, USA.

المصدر: MSystems [mSystems] 2021 Feb 16; Vol. 6 (1). Date of Electronic Publication: 2021 Feb 16.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 101680636 Publication Model: Electronic Cited Medium: Print ISSN: 2379-5077 (Print) Linking ISSN: 23795077 NLM ISO Abbreviation: mSystems Subsets: PubMed not MEDLINE

المؤلفون: Wilken SE; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Seppälä S; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Lankiewicz TS; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA.; Department of Evolution Ecology and Marine Biology, University of California, Santa Barbara, CA, 93106, USA., Saxena M; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Henske JK; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA., Salamov AA; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, USA., Grigoriev IV; US Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, USA., O'Malley MA; Department of Chemical Engineering, University of California, Santa Barbara, CA, 93106, USA.

المصدر: Metabolic engineering communications [Metab Eng Commun] 2019 Nov 15; Vol. 10, pp. e00107. Date of Electronic Publication: 2019 Nov 15 (Print Publication: 2020).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101642117 Publication Model: eCollection Cited Medium: Internet ISSN: 2214-0301 (Electronic) Linking ISSN: 22140301 NLM ISO Abbreviation: Metab Eng Commun Subsets: PubMed not MEDLINE

المؤلفون: Gilmore SP; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Lankiewicz TS; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States.; Department of Ecology, Evolution, and Marine Biology , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Wilken SE; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Brown JL; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Sexton JA; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Henske JK; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States., Theodorou MK; Harper Adams University , Agriculture Centre for Sustainable Energy Systems , Newport , Shropshire TF10 8NB , United Kingdom., Valentine DL; Department of Earth Science and Marine Science Institute , University of California Santa Barbara , Santa Barbara , California 93106 , United States., O'Malley MA; Department of Chemical Engineering , University of California Santa Barbara , Santa Barbara , California 93106 , United States.

المصدر: ACS synthetic biology [ACS Synth Biol] 2019 Sep 20; Vol. 8 (9), pp. 2174-2185. Date of Electronic Publication: 2019 Sep 04.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101575075 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2161-5063 (Electronic) Linking ISSN: 21615063 NLM ISO Abbreviation: ACS Synth Biol Subsets: MEDLINE

مواضيع طبية MeSH: Biomass*, Methanobacteriaceae/*metabolism , Piromyces/*metabolism , Spirochaetaceae/*metabolism, Anaerobiosis ; Biofuels ; Lignin/metabolism ; Methane/metabolism ; Methanobacteriaceae/growth & development ; Microbial Consortia ; Piromyces/growth & development ; Spirochaetaceae/growth & development