المؤلفون: Sali, Andrej, Fischbach, Michael, Medema, MH, Cimermancic, P, Takano, E, Fischbach, MA

URL الوصول: https://escholarship.org/uc/item/7k90h0sn

المؤلفون: Meijer D; Bioinformatics Group, Wageningen University & Research, Wageningen, the Netherlands. david.meijer@wur.nl., Medema MH; Bioinformatics Group, Wageningen University & Research, Wageningen, the Netherlands. marnix.medema@wur.nl., van der Hooft JJJ; Bioinformatics Group, Wageningen University & Research, Wageningen, the Netherlands. justin.vanderhooft@wur.nl.

المصدر: Journal of cheminformatics [J Cheminform] 2024 May 23; Vol. 16 (1), pp. 58. Date of Electronic Publication: 2024 May 23.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 101516718 Publication Model: Electronic Cited Medium: Print ISSN: 1758-2946 (Print) Linking ISSN: 17582946 NLM ISO Abbreviation: J Cheminform Subsets: PubMed not MEDLINE

المؤلفون: Machushynets NV; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Al Ayed K; Biological Chemistry Group, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Terlouw BR; Bioinformatics Group, Wageningen University, Wageningen 6700 PB, The Netherlands., Du C; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Buijs NP; Biological Chemistry Group, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Willemse J; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Elsayed SS; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., Schill J; BioVersys AG, c/o Technologiepark, Basel CH-4057, Switzerland., Trebosc V; BioVersys AG, c/o Technologiepark, Basel CH-4057, Switzerland., Pieren M; BioVersys AG, c/o Technologiepark, Basel CH-4057, Switzerland., Alexander FM; School of Chemistry and Chemical Engineering, Queen's University of Belfast, Belfast BT9 5AG, United Kingdom., Cochrane SA; School of Chemistry and Chemical Engineering, Queen's University of Belfast, Belfast BT9 5AG, United Kingdom., Liles MR; Department of Biological Sciences, Auburn University, Auburn, Alabama 36849, United States., Medema MH; Bioinformatics Group, Wageningen University, Wageningen 6700 PB, The Netherlands., Martin NI; Biological Chemistry Group, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands., van Wezel GP; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden 2333 BE, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology, Wageningen 6700 PB, The Netherlands.

المصدر: ACS chemical biology [ACS Chem Biol] 2024 May 17; Vol. 19 (5), pp. 1106-1115. Date of Electronic Publication: 2024 Apr 11.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101282906 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1554-8937 (Electronic) Linking ISSN: 15548929 NLM ISO Abbreviation: ACS Chem Biol Subsets: MEDLINE

مواضيع طبية MeSH: Anti-Bacterial Agents*/pharmacology , Anti-Bacterial Agents*/chemistry , Pseudomonas aeruginosa*/drug effects , Microbial Sensitivity Tests*, Humans ; Host Specificity ; Drug Discovery ; Lipopeptides/pharmacology ; Lipopeptides/chemistry ; Peptides

المؤلفون: Augustijn HE; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands., Karapliafis D; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands., Joosten KMM; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands., Rigali S; InBioS - Center for Protein Engineering, University of Liège, Institut de Chimie, B-4000 Liège, Belgium., van Wezel GP; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands. Electronic address: g.wezel@biology.leidenuniv.nl., Medema MH; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands. Electronic address: marnix.medema@wur.nl.

المصدر: Journal of molecular biology [J Mol Biol] 2024 Apr 03, pp. 168558. Date of Electronic Publication: 2024 Apr 03.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

المؤلفون: Hrovat K; Bioinformatics Group, Wageningen University and Research, 6708 PB Wageningen, The Netherlands., Dutilh BE; Theoretical Biology and Bioinformatics, Department of Biology, Faculty of Science, Utrecht University, 3584 CH Utrecht, The Netherlands.; Institute of Biodiversity, Faculty of Biological Sciences, Friedrich Schiller University Jena, 07743 Jena, Germany.; Cluster of Excellence Balance of the Microverse, Friedrich Schiller University Jena, 07745 Jena, Germany., Medema MH; Bioinformatics Group, Wageningen University and Research, 6708 PB Wageningen, The Netherlands., Melkonian C; Bioinformatics Group, Wageningen University and Research, 6708 PB Wageningen, The Netherlands.; Theoretical Biology and Bioinformatics, Department of Biology, Faculty of Science, Utrecht University, 3584 CH Utrecht, The Netherlands.

المصدر: ISME communications [ISME Commun] 2024 Mar 08; Vol. 4 (1), pp. ycae034. Date of Electronic Publication: 2024 Mar 08 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9918205372406676 Publication Model: eCollection Cited Medium: Internet ISSN: 2730-6151 (Electronic) Linking ISSN: 27306151 NLM ISO Abbreviation: ISME Commun Subsets: PubMed not MEDLINE

المؤلفون: Guerrero-Egido G; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands.; Departamento de Microbiología, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain.; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain., Pintado A; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands.; Departamento de Microbiología, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain.; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain., Bretscher KM; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands.; Departamento de Microbiología, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain.; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain., Arias-Giraldo LM; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands., Paulson JN; Department of Data Sciences, N-Power Medicine, Redwood City, CA, 94063, USA., Spaink HP; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands., Claessen D; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands., Ramos C; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain.; Área de Genética, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain., Cazorla FM; Departamento de Microbiología, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain.; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain., Medema MH; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands.; Bioinformatics Group, Wageningen University, Droevendaalsesteeg 1, 6708 PB, Wageningen, The Netherlands., Raaijmakers JM; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands., Carrión VJ; Institute of Biology, Leiden University, Sylviusweg 72, 2333 BE, Leiden, The Netherlands. vcarrion@uma.es.; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB, Wageningen, The Netherlands. vcarrion@uma.es.; Departamento de Microbiología, Facultad de Ciencias, Campus Universitario de Teatinos s/n, Universidad de Málaga, 29010, Málaga, Spain. vcarrion@uma.es.; Departamento de Protección de Cultivos, Instituto de Hortofruticultura Subtropical y Mediterránea 'La Mayora', Campus Universitario de Teatinos, Universidad de Málaga-Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29010, Málaga, Spain. vcarrion@uma.es.

المصدر: Nature communications [Nat Commun] 2024 Mar 07; Vol. 15 (1), pp. 2072. Date of Electronic Publication: 2024 Mar 07.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Genome, Bacterial*/genetics , Pseudomonas syringae*/genetics, Workflow ; Genomics/methods

المؤلفون: van Bergeijk DA; Department of Microbiology, Immunology and Transplantation (Laboratory of Molecular Bacteriology), KU Leuven, Leuven, Belgium.; Center for Microbiology, VIB, Leuven, Belgium., Augustijn HE; Institute of Biology, Leiden University, Leiden, The Netherlands.; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands., Elsayed SS; Institute of Biology, Leiden University, Leiden, The Netherlands., Willemse J; Institute of Biology, Leiden University, Leiden, The Netherlands., Carrión VJ; Institute of Biology, Leiden University, Leiden, The Netherlands.; Department of Microbiology, University of Málaga, Málaga, Spain.; Department of Microbial Ecology, Netherlands Institute of Ecology, Wageningen, The Netherlands., Du C; Institute of Biology, Leiden University, Leiden, The Netherlands., Urem M; Institute of Biology, Leiden University, Leiden, The Netherlands., Grigoreva LV; North-Eastern Federal University, Yakutsk, Russia., Cheprasov MY; North-Eastern Federal University, Yakutsk, Russia., Grigoriev S; North-Eastern Federal University, Yakutsk, Russia., Jansen H; Future Genomics, Leiden, The Netherlands., Wintermans B; Department of Medical Microbiology, Adrz Hospital, Goes, The Netherlands., Budding AE; Inbiome, Amsterdam, Netherlands., Spaink HP; Institute of Biology, Leiden University, Leiden, The Netherlands., Medema MH; Institute of Biology, Leiden University, Leiden, The Netherlands.; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands., van Wezel GP; Institute of Biology, Leiden University, Leiden, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology, Wageningen, The Netherlands.

المصدر: Environmental microbiology [Environ Microbiol] 2024 Feb; Vol. 26 (2), pp. e16589.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Blackwell Science Country of Publication: England NLM ID: 100883692 Publication Model: Print Cited Medium: Internet ISSN: 1462-2920 (Electronic) Linking ISSN: 14622912 NLM ISO Abbreviation: Environ Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Mammoths* , Streptomyces*/genetics , Actinomycetales*, Animals ; Phylogeny ; Genomics ; Feces

المؤلفون: Augustijn HE; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands.; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands., Roseboom AM; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands., Medema MH; Bioinformatics Group, Wageningen University, Wageningen, The Netherlands.; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands., van Wezel GP; Molecular Biotechnology, Institute of Biology, Leiden University, Leiden, The Netherlands.; Netherlands Institute for Ecology (NIOO-KNAW), Wageningen, The Netherlands.

المصدر: Journal of industrial microbiology & biotechnology [J Ind Microbiol Biotechnol] 2024 Jan 09; Vol. 51.

نوع المنشور: Journal Article; Review; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: Germany NLM ID: 9705544 Publication Model: Print Cited Medium: Internet ISSN: 1476-5535 (Electronic) Linking ISSN: 13675435 NLM ISO Abbreviation: J Ind Microbiol Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Actinobacteria*/metabolism , Actinobacteria*/genetics , Biological Products*/metabolism , Drug Discovery* , Gene Regulatory Networks*, Biosynthetic Pathways ; Computational Biology/methods ; Gene Expression Regulation, Bacterial ; Multigene Family ; Transcription Factors/metabolism ; Transcription Factors/genetics

المؤلفون: Jing J; Bioinformatics Group, Department of Plant Science, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB Wageningen, The Netherlands.; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands., Garbeva P; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands., Raaijmakers JM; Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), Droevendaalsesteeg 10, 6708 PB Wageningen, The Netherlands., Medema MH; Bioinformatics Group, Department of Plant Science, Wageningen University & Research, Droevendaalsesteeg 1, 6708PB Wageningen, The Netherlands.

المصدر: The ISME journal [ISME J] 2024 Jan 08; Vol. 18 (1).

نوع المنشور: Review; Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101301086 Publication Model: Print Cited Medium: Internet ISSN: 1751-7370 (Electronic) Linking ISSN: 17517362 NLM ISO Abbreviation: ISME J Subsets: MEDLINE

مواضيع طبية MeSH: Microbiota*, Soil/chemistry ; Soil Microbiology ; Microbial Interactions

المؤلفون: Blin K; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby 2800, Denmark., Shaw S; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby 2800, Denmark., Medema MH; Bioinformatics Group, Wageningen University, Wageningen, 6708PB, The Netherlands., Weber T; The Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby 2800, Denmark.

المصدر: Nucleic acids research [Nucleic Acids Res] 2024 Jan 05; Vol. 52 (D1), pp. D586-D589.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: Biosynthetic Pathways*/genetics , Genome, Microbial* , Databases, Genetic* , Biological Products*, Multigene Family ; Software