المؤلفون: Faten El Sayed, Guillaume Sapriel, Nizar Fawal, Aurelia Gruber, Thomas Bauer, Beate Heym, Caroline Dupont, Henri-Jean Garchon, Jean-Louis Gaillard, Martin Rottman, Simon Le Hello

المصدر: Emerging Infectious Diseases, Vol 24, Iss 12, Pp 2360-2363 (2018)

مصطلحات موضوعية: Salmonella enterica serotype Dublin, bone and joint infection, adaptation, epidemiology, bacteria, France, Medicine, Infectious and parasitic diseases, RC109-216

وصف الملف: electronic resource

Relation: https://wwwnc.cdc.gov/eid/article/24/12/18-0214_article; https://doaj.org/toc/1080-6040; https://doaj.org/toc/1080-6059

URL الوصول: https://doaj.org/article/5a95534017ec477fb8aa82244fe629ab

المؤلفون: Laura M F Kuijpers, Thong Phe, Chhun H Veng, Kruy Lim, Sovann Ieng, Chun Kham, Nizar Fawal, Laetitia Fabre, Simon Le Hello, Erika Vlieghe, François-Xavier Weill, Jan Jacobs, Willy E Peetermans

المصدر: PLoS Neglected Tropical Diseases, Vol 11, Iss 9, p e0005964 (2017)

مصطلحات موضوعية: Arctic medicine. Tropical medicine, RC955-962, Public aspects of medicine, RA1-1270

وصف الملف: electronic resource

Relation: http://europepmc.org/articles/PMC5624643?pdf=render; https://doaj.org/toc/1935-2727; https://doaj.org/toc/1935-2735

URL الوصول: https://doaj.org/article/0b2b2cc728a743bcb5d5120cb7b570c1

المؤلفون: Martin Rottman, Thomas W. Bauer, Nizar Fawal, Aurelia Gruber, Caroline Dupont, Guillaume Sapriel, Henri-Jean Garchon, Simon Le Hello, Faten El Sayed, Beate Heym, Jean-Louis Gaillard

المساهمون: Hôpital Ambroise Paré [AP-HP], Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Atelier de BioInformatique (ABI), Sorbonne Université (SU), Centre National de Référence - National Reference Center Escherichia coli, Shigella et Salmonella (CNR-ESS), Institut Pasteur [Paris], Hôpital Raymond Poincaré [AP-HP], This work was supported by the French National Reference Center for Escherichia coli, Shigella, and Salmonella, co-funded by Santé Publique France and belonging to the Integrative Biology of Emerging Infectious Diseases Laboratory of Excellence funded by the French Government Investissement d’Avenir program (grant no. ANR-10-LABX-62-IBEID)., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), Institut Pasteur [Paris] (IP)

المصدر: Emerging Infectious Diseases, Vol 24, Iss 12, Pp 2360-2363 (2018)
Emerging Infectious Diseases
Emerging Infectious Diseases, Centers for Disease Control and Prevention, 2018, 24 (12), pp.2360-2363. ⟨10.3201/eid2412.180214⟩
Emerging Infectious Diseases, 2018, 24 (12), pp.2360-2363. ⟨10.3201/eid2412.180214⟩

مصطلحات موضوعية: 0301 basic medicine, Microbiology (medical), Serotype, Prosthesis-Related Infections, 030231 tropical medicine, 030106 microbiology, Adaptation, Biological, lcsh:Medicine, Microbial Sensitivity Tests, adaptation, Microbiology, lcsh:Infectious and parasitic diseases, 03 medical and health sciences, 0302 clinical medicine, bone and joint infection, Humans, lcsh:RC109-216, bacteria, Phylogeny, 030304 developmental biology, Aged, 0303 health sciences, biology, Salmonella enterica serotype Dublin, lcsh:R, Dispatch, Salmonella enterica, biology.organism_classification, [SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology, 3. Good health, 030104 developmental biology, Infectious Diseases, [SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitology, Phenotype, Genes, Bacterial, [SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/Virology, Host-Pathogen Interactions, Salmonella Infections, Salmonella dublin, Female, epidemiology, Host adaptation, Hip Prosthesis, France, Genome, Bacterial, In-Host Adaptation of Salmonella enterica Serotype Dublin during Prosthetic Hip Joint Infection

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b25d7a293c7fd7431bae5bf2f8c3fd97
https://wwwnc.cdc.gov/eid/article/24/12/18-0214_article

المؤلفون: Christophe Roux, Christophe Dunand, Catherine Mathé, Nizar Fawal

المصدر: Scientific Reports
Scientific Reports, Vol 9, Iss 1, Pp 1-14 (2019)

مصطلحات موضوعية: 0106 biological sciences, 0301 basic medicine, musculoskeletal diseases, Evolution, Bioinformatics, In silico, lcsh:Medicine, macromolecular substances, 01 natural sciences, Genome, Article, Cell wall, Evolution, Molecular, 03 medical and health sciences, Phylogenetics, Data Mining, lcsh:Science, Dikarya, skin and connective tissue diseases, Gene, Phylogeny, Genetics, Multidisciplinary, biology, lcsh:R, fungi, Intron, Fungi, Computational Biology, Molecular Sequence Annotation, biology.organism_classification, 030104 developmental biology, Peroxidases, biology.protein, lcsh:Q, 010606 plant biology & botany, Peroxidase

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a57c8bbe91f1237808268c9a6c1a36a8
http://europepmc.org/articles/PMC6937255

المؤلفون: François-Xavier Weill, Karen H. Keddy, Mireille Dosso, Sandra Moore, Anne Laure Page, Renaud Piarroux, Jean Michel Fournier, Antoinette Ngandjio, Monakhova Ev, Julian Parkhill, Sébastien Breurec, Monzer Hamze, Nizar Fawal, Henrik Salje, Fati Sidikou, Elisabeth Njamkepo, Asish K. Mukhopadhyay, Maria Damian, Gordon Dougan, Kathryn E. Holt, Marie Laure Quilici, Daryl Domman, Raymond Bercion, Jean Rauzier, Martin A. Mengel, Cheryl L. Tarr, Patrick A. D. Grimont, Benoit Garin, Laurence Bonte, Goutam Chowdhury, Roland Grunow, Jean Louis Koeck, Berthe Marie Njanpop-Lafourcade, Guillaume Sapriel, Myriam Henkens, Carlo Pazzani, Christiane Bouchier, Ankur Mutreja, Nicholas R. Thomson, Francisco J. Luquero, Thandavarayan Ramamurthy

المساهمون: Bactéries pathogènes entériques (BPE), Institut Pasteur [Paris] (IP), The Wellcome Trust Sanger Institute [Cambridge], Centers for Disease Control and Prevention [Atlanta] (CDC), Centers for Disease Control and Prevention, National Institute for Communicable Diseases [Johannesburg] (NICD), University of the Witwatersrand [Johannesburg] (WITS), Modélisation mathématique des maladies infectieuses - Mathematical modelling of Infectious Diseases, Institut Pasteur [Paris] (IP)-Centre National de la Recherche Scientifique (CNRS), Johns Hopkins Bloomberg School of Public Health [Baltimore], Johns Hopkins University (JHU), Hôpital de la Timone [CHU - APHM] (TIMONE), Université de la Méditerranée - Aix-Marseille 2, Institut Pasteur de Bangui, Réseau International des Instituts Pasteur (RIIP), Institut Pasteur de Dakar, Epicentre [Paris] [Médecins Sans Frontières], Centre Pasteur du Cameroun, Institut Pasteur de Côte d'Ivoire, Rostov-on-Don Research Institute for Plague Control, Génomique (Plate-Forme) - Genomics Platform, Università degli studi di Bari Aldo Moro = University of Bari Aldo Moro (UNIBA), University of Cambridge [UK] (CAM), Translational Health Science and Technology Institute [Faridabad] (THSTI), Robert Koch Institute [Berlin] (RKI), Centre de Recherche Médicale et Sanitaire (Niamey, Niger) (CERMES), Cantacuzino Institute [Romania], Agence de Médecine Préventive, Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Institut de Systématique, Evolution, Biodiversité (ISYEB ), Muséum national d'Histoire naturelle (MNHN)-École Pratique des Hautes Études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Université des Antilles (UA), Université Libanaise, Médecins Sans Frontières Belgique, National Institute of Cholera and Enteric Diseases, Hôpital Bouffard - Centre Hospitalier des Armées Bouffard [Djibouti], Service de Santé des Armées, Centre National de Référence des Vibrions et du Choléra - National Reference Center Vibrios and Cholera (CNR), Biodiversité des Bactéries Pathogènes Émergentes, University of Melbourne, London School of Hygiene and Tropical Medicine (LSHTM), This study was supported by the Institut Pasteur and the Institut Pasteur International Network, the Institut de Veille Sanitaire, the French government’s Investissement d’Avenir program, Laboratoire d’Excellence 'Integrative Biology of Emerging Infectious Diseases' (grant no. ANR-10-LABX-62-IBEID), the Fondation Le Roch-Les Mousquetaires, the Wellcome Trust through grant 098051 to the Sanger Institute, and the Indian Council of Medical Research, New Delhi, India., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), Institut Pasteur [Paris], Institut Pasteur [Paris]-Centre National de la Recherche Scientifique (CNRS), University of Bari Aldo Moro (UNIBA), Muséum national d'Histoire naturelle (MNHN)-École pratique des hautes études (EPHE), Weill, François-Xavier [0000-0001-9941-5799], Domman, Daryl [0000-0001-5389-9185], Njamkepo, Elisabeth [0000-0001-6791-6003], Tarr, Cheryl [0000-0001-6290-365X], Fawal, Nizar [0000-0002-9914-0315], Keddy, Karen H [0000-0001-8640-2235], Salje, Henrik [0000-0003-3626-4254], Bercion, Raymond [0000-0002-0466-0407], Luquero, Francisco J [0000-0003-0885-8418], Ngandjio, Antoinette [0000-0001-9777-3656], Dosso, Mireille [0000-0003-4744-8235], Monakhova, Elena [0000-0002-9216-7777], Bouchier, Christiane [0000-0003-3549-1543], Pazzani, Carlo [0000-0003-0414-2965], Grunow, Roland [0000-0001-8966-8469], Sidikou, Fati [0000-0002-0269-5454], Njanpop-Lafourcade, Berthe-Marie [0000-0001-6211-6402], Page, Anne-Laure [0000-0001-7952-3178], Koeck, Jean-Louis [0000-0002-6493-3905], Dougan, Gordon [0000-0003-0022-965X], Grimont, Patrick AD [0000-0002-6264-136X], Parkhill, Julian [0000-0002-7069-5958], Holt, Kathryn E [0000-0003-3949-2471], Piarroux, Renaud [0000-0002-4151-4134], Thomson, Nicholas R [0000-0002-4432-8505], Apollo - University of Cambridge Repository

المصدر: Science
Science, 2017, 358 (6364), pp.785-789. ⟨10.1126/science.aad5901⟩
Science, American Association for the Advancement of Science, 2017, 358 (6364), pp.785-789. ⟨10.1126/science.aad5901⟩

مصطلحات موضوعية: 0301 basic medicine, MESH: Pandemics, Asia, Lineage (genetic), Genomic data, Zoology, MESH: Vibrio cholerae O1, Biology, MESH: Genome, Bacterial, medicine.disease_cause, Africa, Southern, West africa, 03 medical and health sciences, Cholera, MESH: Cholera, Phylogenetics, MESH: Africa, Western, parasitic diseases, Pandemic, medicine, Humans, MESH: Phylogeny, Pandemics, Phylogeny, MESH: Africa, Eastern, MESH: Humans, Multidisciplinary, MESH: Asia, Transmission (medicine), MESH: Genomics, Vibrio cholerae O1, Genomics, Africa, Eastern, medicine.disease, 3. Good health, Africa, Western, 030104 developmental biology, Vibrio cholerae, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, MESH: Africa, Southern, Genome, Bacterial

وصف الملف: application/pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::40eb56bcab2a4566c5917c236f770c11
https://doi.org/10.1126/science.aad5901

المؤلفون: Aymeric, Ung, Amrish Y, Baidjoe, Dieter, Van Cauteren, Nizar, Fawal, Laetitia, Fabre, Caroline, Guerrisi, Kostas, Danis, Anne, Morand, Marie-Pierre, Donguy, Etienne, Lucas, Louise, Rossignol, Sophie, Lefèvre, Marie-Léone, Vignaud, Sabrina, Cadel-Six, Renaud, Lailler, Nathalie, Jourdan-Da Silva, Simon, Le Hello

المصدر: Eurosurveillance

مصطلحات موضوعية: Adult, Male, Adolescent, Minisatellite Repeats, Polymorphism, Single Nucleotide, Disease Outbreaks, cheese, Young Adult, Salmonella, Animals, Humans, raw-milk, Child, Aged, Aged, 80 and over, Whole Genome Sequencing, Outbreaks, Infant, Middle Aged, Electrophoresis, Gel, Pulsed-Field, Salmonella Dublin, Milk, Case-Control Studies, Child, Preschool, Cattle, Female, Salmonella Food Poisoning, France, WGS

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid________::64f50a85c438aa03a773c77f7e414cfb
https://pubmed.ncbi.nlm.nih.gov/30670140

المؤلفون: Amrish Baidjoe, Marie-Pierre Donguy, Nathalie Jourdan-Da Silva, Kostas Danis, Sabrina Cadel-Six, Dieter Van Cauteren, Laetitia Fabre, Aymeric Ung, Sophie Lefèvre, Caroline Guerrisi, Marie-Léone Vignaud, Louise Rossignol, Etienne Lucas, Simon Le Hello, Nizar Fawal, Renaud Lailler, Anne Morand

المساهمون: Santé publique France - French National Public Health Agency [Saint-Maurice, France], European Programme for Intervention Epidemiology Training (EPIET), European Centre for Disease Prevention and Control (ECDC), Centre National de Référence - National Reference Center Escherichia coli, Shigella et Salmonella (CNR-ESS), Institut Pasteur [Paris], European Programme for Public Health Microbiology Training (EUPHEM), Institut Pierre Louis d'Epidémiologie et de Santé Publique (iPLESP), Institut National de la Santé et de la Recherche Médicale (INSERM)-Sorbonne Université (SU), Sorbonne Université - Faculté de Médecine (SU FM), Sorbonne Université (SU), Direction Générale de l'Alimentation (DGAL), Ministère de l'agriculture, de l'agroalimentaire et de la forêt, Agence nationale de sécurité sanitaire de l'alimentation, de l'environnement et du travail (ANSES), Université Paris-Est (UPE), European Centre for Disease Prevention and Control [Stockholm, Sweden] (ECDC), Institut Pasteur [Paris] (IP)

المصدر: Eurosurveillance
Eurosurveillance, European Centre for Disease Prevention and Control, 2019, 24 (3), ⟨10.2807/1560-7917.es.2019.24.3.1700703⟩
Eurosurveillance, 2019, 24 (3), ⟨10.2807/1560-7917.es.2019.24.3.1700703⟩

مصطلحات موضوعية: 0301 basic medicine, Serotype, Salmonella, Epidemiology, 030106 microbiology, Prevalence, Multiple Loci VNTR Analysis, medicine.disease_cause, cheese, 03 medical and health sciences, [SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseases, Virology, Environmental health, medicine, raw-milk, 2. Zero hunger, business.industry, Public Health, Environmental and Occupational Health, Outbreak, Raw milk, Food safety, Salmonella Dublin, 3. Good health, 030104 developmental biology, Geography, outbreaks, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, France, business, WGS, Food contaminant

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a2371f0a2db13d5dd1d0c382ce455cf8
https://doi.org/10.2807/1560-7917.es.2019.24.3.1700703

المؤلفون: Nizar Fawal, Jan Jacobs, Laura Maria Francisca Kuijpers, François-Xavier Weill, Chhun Heng Veng, Simon Le Hello, Laetitia Fabre, Willy Peetermans, Thong Phe, Erika Vlieghe, Sovann Ieng, Kruy Lim, Chun Kham

المساهمون: Institute of Tropical Medicine [Antwerp] (ITM), Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Sihanouk Hospital Center of HOPE [Phnom Penh], Centre National de Référence - National Reference Center Escherichia coli, Shigella et Salmonella (CNR-ESS), Institut Pasteur [Paris] (IP), Antwerp University Hospital [Edegem] (UZA), University Hospitals Leuven [Leuven], The surveillance of bloodstream infections at the Sihanouk Hospital Center of HOPE is supported by the Belgian Directorate of Development Cooperation (DGD) (https://diplomatie.belgium.be/en/policy/development_cooperation/who_we_are/our_organisation/dgd) through project 2.08 of the Third Framework Agreement between the Belgian DGD (Ministry of Development Cooperation) and the Institute of Tropical Medicine (ITM). This study was further supported by the Strategic Network Laboratory Quality Management (LQM) project (http://www.labquality.be/) (Belgian Development Cooperation), the Institut Pasteur and the French government’s Investissement d’Avenir programme, Laboratoire d’Excellence ‘Integrative Biology of Emerging Infectious Diseases’ (http://www.agence-nationale-recherche.fr/?ProjetIA=10-LABX-0062) (grant number ANR-10-LABX-62-IBEID). LMFK is supported by the Flemish Ministry of Sciences (EWI, SOFI project IDIS) (http://www.ewi-vlaanderen.be/en) and received additional travel grants (grant numbers K2.060.16N and K2.065.17N) from the Fund for Scientific Research Flanders (F.W.O.-Vlaanderen, Belgium) (http://www.fwo.be/). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript., ANR-10-LABX-0062,IBEID,Integrative Biology of Emerging Infectious Diseases(2010), Institut Pasteur [Paris]

المصدر: PLoS Neglected Tropical Diseases
PLoS Neglected Tropical Diseases, 2017, 11 (9), pp.e0005964. ⟨10.1371/journal.pntd.0005964⟩
PLoS Neglected Tropical Diseases, Vol 11, Iss 9, p e0005964 (2017)
PLoS Neglected Tropical Diseases, Public Library of Science, 2017, 11 (9), pp.e0005964. ⟨10.1371/journal.pntd.0005964⟩
PLoS neglected tropical diseases

مصطلحات موضوعية: Bacterial Diseases, 0301 basic medicine, Male, Salmonella, Salmonellosis, Physiology, Fevers, Pathology and Laboratory Medicine, Salmonella typhi, medicine.disease_cause, Salmonella Typhi, Geographical Locations, Medicine and Health Sciences, Blood culture, medicine.diagnostic_test, biology, lcsh:Public aspects of medicine, Paratyphoid fever, Salmonella paratyphi A, Bacterial Pathogens, Body Fluids, 3. Good health, Anti-Bacterial Agents, Ciprofloxacin, Salmonella Enterica, Blood, Infectious Diseases, Medical Microbiology, Salmonella enterica, Female, Pathogens, Anatomy, Cambodia, Research Article, medicine.drug, Asia, lcsh:Arctic medicine. Tropical medicine, lcsh:RC955-962, 030106 microbiology, Microbiology, complex mixtures, Typhoid fever, 03 medical and health sciences, Signs and Symptoms, Enterobacteriaceae, Diagnostic Medicine, Microbial Control, Drug Resistance, Bacterial, Paratyphoid Fever, medicine, Humans, Typhoid Fever, Microbial Pathogens, Retrospective Studies, Pharmacology, Bacteria, business.industry, Organisms, Public Health, Environmental and Occupational Health, Biology and Life Sciences, lcsh:RA1-1270, biology.organism_classification, medicine.disease, Virology, Antibiotic Resistance, People and Places, [SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie, Human medicine, Antimicrobial Resistance, business

وصف الملف: Electronic-eCollection; application/pdf; pdf

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7873926edbac0a7e71468b636cf85a41
https://hal-pasteur.archives-ouvertes.fr/pasteur-02045954

المؤلفون: Elisabeth Njamkepo, Nizar Fawal, Alicia Tran-Dien, Jane Hawkey, Nancy Strockbine, Claire Jenkins, Kaisar A. Talukder, Raymond Bercion, Konstantin Kuleshov, Renáta Kolínská, Julie E. Russell, Lidia Kaftyreva, Marie Accou-Demartin, Andreas Karas, Olivier Vandenberg, Alison E. Mather, Carl J. Mason, Andrew J. Page, Thandavarayan Ramamurthy, Chantal Bizet, Andrzej Gamian, Isabelle Carle, Amy Gassama Sow, Christiane Bouchier, Astrid Louise Wester, Monique Lejay-Collin, Marie-Christine Fonkoua, Simon Le Hello, Martin J. Blaser, Cecilia Jernberg, Corinne Ruckly, Audrey Mérens, Anne-Laure Page, Martin Aslett, Peter Roggentin, Angelika Fruth, Erick Denamur, Malabi Venkatesan, Hervé Bercovier, Ladaporn Bodhidatta, Chien-Shun Chiou, Dominique Clermont, Bianca Colonna, Svetlana Egorova, Gururaja P. Pazhani, Analia V. Ezernitchi, Ghislaine Guigon, Simon R. Harris, Hidemasa Izumiya, Agnieszka Korzeniowska-Kowal, Anna Lutyńska, Malika Gouali, Francine Grimont, Céline Langendorf, Monika Marejková, Lorea A.M. Peterson, Guillermo Perez-Perez, Antoinette Ngandjio, Alexander Podkolzin, Erika Souche, Mariia Makarova, German A. Shipulin, Changyun Ye, Helena Žemličková, Mária Herpay, Patrick A. D. Grimont, Julian Parkhill, Philippe Sansonetti, Kathryn E. Holt, Sylvain Brisse, Nicholas R. Thomson, François-Xavier Weill

المصدر: Nature Microbiology. 1

مصطلحات موضوعية: Microbiology (medical), Immunology, Genetics, Cell Biology, Applied Microbiology and Biotechnology, Microbiology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9a8060755e74205067ee4ae7fd1085d4
https://doi.org/10.1038/nmicrobiol.2016.209

المؤلفون: Nizar Fawal, Bruno Savelli, Gisele Passaia, Marie Brette, Maxime Fabre, Catherine Mathé, Qiang Li, Christophe Dunand

المصدر: Nucleic Acids Research

مصطلحات موضوعية: Sequence, Internet, Phylogenetic tree, Database, business.industry, Interface (Java), Molecular Sequence Annotation, Articles, Biology, computer.software_genre, Genome, Evolution, Molecular, Annotation, Software, Peroxidases, Genetics, The Internet, business, Databases, Protein, computer

URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fcb5f14bcb50a1c5a5afd98be2970372
http://europepmc.org/articles/PMC3531118