المؤلفون: Yang L; School of Chemistry and Chemical Engineering, New Cornerstone Science Laboratory, Frontiers Science Center for Transformative Molecules, Zhangjiang Institute for Advanced Study and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China., Li Q; School of Chemistry and Chemical Engineering, New Cornerstone Science Laboratory, Frontiers Science Center for Transformative Molecules, Zhangjiang Institute for Advanced Study and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China., Ge Z; School of Chemistry and Chemical Engineering, New Cornerstone Science Laboratory, Frontiers Science Center for Transformative Molecules, Zhangjiang Institute for Advanced Study and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China., Fan C; School of Chemistry and Chemical Engineering, New Cornerstone Science Laboratory, Frontiers Science Center for Transformative Molecules, Zhangjiang Institute for Advanced Study and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China., Huang W; School of Chemistry and Chemical Engineering, New Cornerstone Science Laboratory, Frontiers Science Center for Transformative Molecules, Zhangjiang Institute for Advanced Study and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China.

المصدر: Nano letters [Nano Lett] 2024 Sep 25; Vol. 24 (38), pp. 11768-11778. Date of Electronic Publication: 2024 Sep 11.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101088070 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1530-6992 (Electronic) Linking ISSN: 15306984 NLM ISO Abbreviation: Nano Lett Subsets: MEDLINE

مواضيع طبية MeSH: DNA*/chemistry , Nucleic Acid Conformation* , Nanotechnology*/methods, Nanostructures/chemistry ; DNA, Single-Stranded/chemistry ; Biomechanical Phenomena

المؤلفون: Gao J; Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China., Liu H; Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China., Zhuo C; Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China., Zeng C; Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China., Zhao Y; Institute of Biophysics and Department of Physics, Central China Normal University, Wuhan 430079, China.

المصدر: Journal of chemical information and modeling [J Chem Inf Model] 2024 Sep 23; Vol. 64 (18), pp. 6979-6992. Date of Electronic Publication: 2024 Sep 04.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101230060 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1549-960X (Electronic) Linking ISSN: 15499596 NLM ISO Abbreviation: J Chem Inf Model Subsets: MEDLINE

مواضيع طبية MeSH: RNA*/chemistry , RNA*/metabolism , Nucleic Acid Conformation* , Nucleotides*/chemistry , Nucleotides*/metabolism, Small Molecule Libraries/chemistry ; Small Molecule Libraries/pharmacology ; Small Molecule Libraries/metabolism ; Deep Learning ; Models, Molecular ; Surface Properties

المؤلفون: Anusha; Department of Chemistry, Purdue University, West Lafayette, Indiana 47907, United States., Zhang Z; College of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China., Li J; Department of Chemistry, Purdue University, West Lafayette, Indiana 47907, United States., Zuo H; College of Pharmaceutical Sciences, Southwest University, Chongqing 400715, China., Mao C; Department of Chemistry, Purdue University, West Lafayette, Indiana 47907, United States.

المصدر: Journal of the American Chemical Society [J Am Chem Soc] 2024 Sep 18; Vol. 146 (37), pp. 25422-25425. Date of Electronic Publication: 2024 Sep 05.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 7503056 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-5126 (Electronic) Linking ISSN: 00027863 NLM ISO Abbreviation: J Am Chem Soc Subsets: MEDLINE

مواضيع طبية MeSH: DNA*/chemistry , Nanostructures*/chemistry , Nucleic Acid Conformation*, Models, Molecular ; Nanotechnology/methods ; Nucleotide Motifs

المؤلفون: Parmar S; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA., Bume DD; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA., Connelly CM; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA., Boer RE; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA., Prestwood PR; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA., Wang Z; Depixus SAS, Paris, France., Labuhn H; Depixus SAS, Paris, France., Sinnadurai K; Depixus SAS, Paris, France., Feri A; Depixus SAS, Paris, France., Ouellet J; Depixus SAS, Paris, France., Homan P; Center for Cancer Research Collaborative Bioinformatics Resource, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Numata T; Department of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka, Japan., Schneekloth JS Jr; Chemical Biology Laboratory, Center for Cancer Research, National Cancer Institute, Frederick, MD, USA. schneeklothjs@mail.nih.gov.

المصدر: Nature communications [Nat Commun] 2024 Sep 17; Vol. 15 (1), pp. 8173. Date of Electronic Publication: 2024 Sep 17.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Riboswitch*/genetics , Thermoanaerobacter*/metabolism , Thermoanaerobacter*/genetics , Nucleic Acid Conformation*, Ligands ; Binding Sites ; Crystallography, X-Ray ; Aptamers, Nucleotide/metabolism ; Aptamers, Nucleotide/genetics ; Aptamers, Nucleotide/chemistry ; Gene Expression Regulation, Bacterial ; RNA, Bacterial/metabolism ; RNA, Bacterial/genetics ; RNA, Bacterial/chemistry ; Kinetics ; Models, Molecular

المؤلفون: Mwangi MN; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States., Yonkunas MJ; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States., Ageeli AA; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States., McGovern-Gooch KR; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States., Yilmaz S; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States., Baird NJ; Department of Chemistry & Biochemistry, Saint Joseph's University, 600 S. 43rd Street, Philadelphia, Pennsylvania 19104, United States.

المصدر: Biochemistry [Biochemistry] 2024 Sep 17; Vol. 63 (18), pp. 2280-2292. Date of Electronic Publication: 2024 Aug 27.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 0370623 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1520-4995 (Electronic) Linking ISSN: 00062960 NLM ISO Abbreviation: Biochemistry Subsets: MEDLINE

مواضيع طبية MeSH: RNA, Long Noncoding*/metabolism , RNA, Long Noncoding*/chemistry , RNA, Long Noncoding*/genetics , Nucleic Acid Conformation* , RNA Stability*, Humans ; Models, Molecular ; Scattering, Small Angle

المؤلفون: Liu Y; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Luo Z; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Chen X; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Yang X; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Qi Q; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Alifu M; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Tao C; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Cui W; Institute of Life Sciences, Chongqing Medical University, Chongqing, China., Liu M; Institute of Life Sciences, Chongqing Medical University, Chongqing, China. Electronic address: liumengmeng103000@cqmu.edu.cn., Wang W; Institute of Life Sciences, Chongqing Medical University, Chongqing, China. Electronic address: wangwei@cqmu.edu.cn.

المصدر: Biochemical and biophysical research communications [Biochem Biophys Res Commun] 2024 Sep 17; Vol. 725, pp. 150252. Date of Electronic Publication: 2024 Jun 10.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Country of Publication: United States NLM ID: 0372516 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1090-2104 (Electronic) Linking ISSN: 0006291X NLM ISO Abbreviation: Biochem Biophys Res Commun Subsets: MEDLINE

مواضيع طبية MeSH: Lysine-tRNA Ligase*/metabolism , Lysine-tRNA Ligase*/chemistry , Lysine-tRNA Ligase*/genetics , HIV-1*/genetics , HIV-1*/enzymology , Reverse Transcription* , Genome, Viral* , Nucleic Acid Conformation*, Humans ; RNA, Viral/metabolism ; RNA, Viral/chemistry ; RNA, Viral/genetics ; 5' Untranslated Regions ; Protein Binding

المؤلفون: Giarimoglou N; Department of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece., Kouvela A; Department of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece., Zhang J; Laboratory of Molecular Biology, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, Maryland 20892, USA., Stamatopoulou V; Department of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece., Stathopoulos C; Department of Biochemistry, School of Medicine, University of Patras, 26504 Patras, Greece cstath@med.upatras.gr.

المصدر: RNA (New York, N.Y.) [RNA] 2024 Sep 16; Vol. 30 (10), pp. 1328-1344. Date of Electronic Publication: 2024 Sep 16.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9509184 Publication Model: Electronic Cited Medium: Internet ISSN: 1469-9001 (Electronic) Linking ISSN: 13558382 NLM ISO Abbreviation: RNA Subsets: MEDLINE

مواضيع طبية MeSH: Riboswitch*/genetics , Nucleic Acid Conformation* , RNA, Bacterial*/genetics , RNA, Bacterial*/metabolism , RNA, Bacterial*/chemistry, Gene Expression Regulation, Bacterial ; Glycine-tRNA Ligase/genetics ; Glycine-tRNA Ligase/metabolism ; Glycine-tRNA Ligase/chemistry ; RNA, Transfer, Gly/metabolism ; RNA, Transfer, Gly/genetics ; RNA, Transfer, Gly/chemistry ; Base Sequence ; Bacteria/genetics ; Bacteria/metabolism ; Humans ; RNA, Transfer/metabolism ; RNA, Transfer/genetics ; RNA, Transfer/chemistry

المؤلفون: Gemler BT; Interdisciplinary Biophysics Graduate Program, The Ohio State University, Columbus, Ohio 43210, USA.; Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, USA., Warner BR; Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, USA.; Department of Microbiology, The Ohio State University, Columbus, Ohio 43210, USA., Bundschuh R; Interdisciplinary Biophysics Graduate Program, The Ohio State University, Columbus, Ohio 43210, USA fredrick.5@osu.edu bundschuh.2@osu.edu.; Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, USA.; Department of Physics, The Ohio State University, Columbus, Ohio 43210, USA.; Department of Chemistry and Biochemistry, The Ohio State University, Columbus, Ohio 43210, USA.; Division of Hematology, Department of Internal Medicine, The Ohio State University, Columbus, Ohio 43210, USA., Fredrick K; Center for RNA Biology, The Ohio State University, Columbus, Ohio 43210, USA fredrick.5@osu.edu bundschuh.2@osu.edu.; Department of Microbiology, The Ohio State University, Columbus, Ohio 43210, USA.

المصدر: RNA (New York, N.Y.) [RNA] 2024 Sep 16; Vol. 30 (10), pp. 1264-1276. Date of Electronic Publication: 2024 Sep 16.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9509184 Publication Model: Electronic Cited Medium: Internet ISSN: 1469-9001 (Electronic) Linking ISSN: 13558382 NLM ISO Abbreviation: RNA Subsets: MEDLINE

مواضيع طبية MeSH: Nucleic Acid Conformation* , RNA, Archaeal*/genetics , RNA, Archaeal*/chemistry , RNA, Archaeal*/metabolism , Archaea*/genetics , RNA, Bacterial*/genetics , RNA, Bacterial*/chemistry , RNA, Bacterial*/metabolism, RNA, Ribosomal/genetics ; RNA, Ribosomal/chemistry ; RNA, Ribosomal/metabolism ; Bacteria/genetics ; RNA Precursors/genetics ; RNA Precursors/metabolism ; RNA Precursors/chemistry ; RNA, Ribosomal, 23S/genetics ; RNA, Ribosomal, 23S/chemistry ; RNA, Ribosomal, 23S/metabolism ; Base Sequence ; RNA, Ribosomal, 16S/genetics ; RNA, Ribosomal, 16S/chemistry ; Base Pairing

المؤلفون: Lee Y; Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, United States of America., Gu S; Department of Biochemistry, Duke University School of Medicine, Durham, NC 27710, United States of America., Al-Hashimi HM; Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY 10032, United States of America. Electronic address: ha2639@cumc.columbia.edu.

المصدر: Journal of molecular biology [J Mol Biol] 2024 Sep 15; Vol. 436 (18), pp. 168710. Date of Electronic Publication: 2024 Jul 14.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

مواضيع طبية MeSH: Nucleic Acid Conformation* , DNA*/chemistry , DNA*/metabolism , Base Pair Mismatch*, Models, Molecular ; Adenine/chemistry ; Adenine/metabolism ; Crystallography, X-Ray ; Hydrogen Bonding ; DNA Repair ; Humans

المؤلفون: Qi F; State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen 361102, China.; Institute of Genomics, School of Medicine, Huaqiao University, Xiamen 361021, China., Chen J; Institute of Genomics, School of Medicine, Huaqiao University, Xiamen 361021, China., Chen Y; Institute of Genomics, School of Medicine, Huaqiao University, Xiamen 361021, China., Sun J; Botnar Research Centre, University of Oxford, Oxford, OX3 7LD, United Kingdom., Lin Y; Institute of Genomics, School of Medicine, Huaqiao University, Xiamen 361021, China., Chen Z; Institute of Genomics, School of Medicine, Huaqiao University, Xiamen 361021, China., Kapranov P; State Key Laboratory of Cellular Stress Biology, School of Life Sciences, Faculty of Medicine and Life Sciences, Xiamen University, Xiamen 361102, China.

المصدر: Genomics, proteomics & bioinformatics [Genomics Proteomics Bioinformatics] 2024 Sep 13; Vol. 22 (3).

نوع المنشور: Journal Article; Evaluation Study

بيانات الدورية: Publisher: Science Press and Elsevier Country of Publication: England NLM ID: 101197608 Publication Model: Print Cited Medium: Internet ISSN: 2210-3244 (Electronic) Linking ISSN: 16720229 NLM ISO Abbreviation: Genomics Proteomics Bioinformatics Subsets: MEDLINE

مواضيع طبية MeSH: RNA, Catalytic*/chemistry , RNA, Catalytic*/metabolism , RNA, Catalytic*/genetics , Nucleic Acid Conformation* , RNA Folding*, Computational Biology/methods ; Software ; RNA/chemistry ; RNA/genetics ; RNA/metabolism ; Deep Learning ; Computer Simulation