المؤلفون: Ahituv, Nadav, Birnbaum, RY, Patwardhan, RP, Kim, MJ, Findlay, GM, Martin, B, Zhao, J, Bell, RJA, Smith, RP, Ku, AA, Shendure, J

URL الوصول: https://escholarship.org/uc/item/3rf828p4

المؤلفون: Soza VL; Department of Biology, University of Washington, Seattle, WA., Lindsley D; Department of Biology, University of Washington, Seattle, WA.; Retired., Waalkes A; Department of Biology, University of Washington, Seattle, WA.; Department of Laboratory Medicine, University of Washington, Seattle, WA., Ramage E; Department of Biology, University of Washington, Seattle, WA., Patwardhan RP; Department of Genome Sciences, University of Washington, Seattle, WA., Burton JN; Department of Genome Sciences, University of Washington, Seattle, WA.; Adaptive Biotechnologies, Seattle, WA., Adey A; Department of Genome Sciences, University of Washington, Seattle, WA.; Department of Molecular and Medical Genetics, Oregon Health and Science University, Portland, OR., Kumar A; Department of Genome Sciences, University of Washington, Seattle, WA.; Department of Pediatrics, Stanford University, Palo Alto, CA., Qiu R; Department of Genome Sciences, University of Washington, Seattle, WA.; Retired., Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA.; Brotman Baty Institute for Precision Medicine, Seattle, WA.; Howard Hughes Medical Institute, University of Washington, Seattle, WA., Hall B; Department of Biology, University of Washington, Seattle, WA.

المصدر: Genome biology and evolution [Genome Biol Evol] 2019 Dec 01; Vol. 11 (12), pp. 3353-3371.

نوع المنشور: Comparative Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE

مواضيع طبية MeSH: Synteny*, Chromosomes, Plant/*genetics , Ericaceae/*genetics , Genome, Plant/*genetics , Rhododendron/*genetics, Base Sequence ; Chromatin/genetics ; Chromosome Mapping ; Genetic Linkage ; Genomic Library ; Molecular Sequence Annotation ; Transposases/genetics

المؤلفون: Rosenberg AB; Department of Electrical Engineering, University of Washington, Seattle, WA 98195, USA., Patwardhan RP; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Shendure J; Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA., Seelig G; Department of Electrical Engineering, University of Washington, Seattle, WA 98195, USA; Department of Computer Science and Engineering, University of Washington, Seattle, WA 98195, USA. Electronic address: gseelig@uw.edu.

المصدر: Cell [Cell] 2015 Oct 22; Vol. 163 (3), pp. 698-711. Date of Electronic Publication: 2015 Oct 22.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

مواضيع طبية MeSH: Alternative Splicing* , Genome, Human* , Models, Genetic* , Polymorphism, Single Nucleotide*, Base Sequence ; Humans ; Molecular Sequence Data ; Nucleotide Motifs ; RNA Splice Sites

المؤلفون: Birnbaum RY; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America; Department of Life Sciences, Ben-Gurion University at the Negev, Beer-Sheva, Israel., Patwardhan RP; Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America., Kim MJ; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America., Findlay GM; Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America., Martin B; Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America., Zhao J; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America; Key Laboratory of Advanced Control and Optimization for Chemical Processes of the Ministry of Education, East China University of Science and Technology, Shanghai, China., Bell RJ; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America; Department of Neurological Surgery, University of California San Francisco, San Francisco, California, United States of America; Biomedical Sciences (BMS) Graduate Program, University of California San Francisco, San Francisco, California, United States of America., Smith RP; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America., Ku AA; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America., Shendure J; Department of Genome Sciences, University of Washington, Seattle, Washington, United States of America., Ahituv N; Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, United States of America; Institute for Human Genetics, University of California San Francisco, San Francisco, California, United States of America.

المصدر: PLoS genetics [PLoS Genet] 2014 Oct 23; Vol. 10 (10), pp. e1004592. Date of Electronic Publication: 2014 Oct 23 (Print Publication: 2014).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101239074 Publication Model: eCollection Cited Medium: Internet ISSN: 1553-7404 (Electronic) Linking ISSN: 15537390 NLM ISO Abbreviation: PLoS Genet Subsets: MEDLINE

مواضيع طبية MeSH: Enhancer Elements, Genetic*, Adaptor Proteins, Signal Transducing/*genetics , Exons/*genetics , Membrane Transport Proteins/*genetics , PPAR gamma/*genetics , Receptors, LDL/*genetics, Animals ; Binding Sites ; Gene Expression Regulation ; HeLa Cells ; Humans ; Liver/metabolism ; Mice ; Mutation, Missense ; Polymorphism, Single Nucleotide ; RNA Splicing/genetics ; Transcription Factors/biosynthesis

المؤلفون: Burton JN; Department of Genome Sciences, University of Washington, Seattle, Washington, USA., Adey A, Patwardhan RP, Qiu R, Kitzman JO, Shendure J

المصدر: Nature biotechnology [Nat Biotechnol] 2013 Dec; Vol. 31 (12), pp. 1119-25. Date of Electronic Publication: 2013 Nov 03.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Algorithms*, Chromatin/*genetics , Chromosome Mapping/*methods , Contig Mapping/*methods , Sequence Analysis, DNA/*methods, Animals ; Base Sequence ; Drosophila ; Humans ; Mice ; Molecular Sequence Data

المؤلفون: Smith RP; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, California, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, California, USA., Taher L; Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, US National Institutes of Health, Bethesda, Maryland, USA.; Institute for Biostatistics and Informatics in Medicine and Ageing Research, University of Rostock, Rostock, Germany., Patwardhan RP; Department of Genome Sciences, University of Washington, Seattle, Washington, USA., Kim MJ; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, California, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, California, USA., Inoue F; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, California, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, California, USA., Shendure J; Department of Genome Sciences, University of Washington, Seattle, Washington, USA., Ovcharenko I; Computational Biology Branch, National Center for Biotechnology Information, National Library of Medicine, US National Institutes of Health, Bethesda, Maryland, USA., Ahituv N; Department of Bioengineering and Therapeutic Sciences, University of California, San Francisco, San Francisco, California, USA.; Institute for Human Genetics, University of California, San Francisco, San Francisco, California, USA.

المصدر: Nature genetics [Nat Genet] 2013 Sep; Vol. 45 (9), pp. 1021-1028. Date of Electronic Publication: 2013 Jul 28.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Pub. Co Country of Publication: United States NLM ID: 9216904 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1718 (Electronic) Linking ISSN: 10614036 NLM ISO Abbreviation: Nat Genet Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation* , Models, Biological* , Regulatory Sequences, Nucleic Acid*, Transcription Factors/*metabolism, Animals ; Binding Sites ; Cell Line ; Cluster Analysis ; Enhancer Elements, Genetic ; Gene Amplification ; Gene Dosage ; Gene Expression ; Genes, Reporter ; Humans ; Liver/metabolism ; Male ; Mice ; Nucleotide Motifs ; Organ Specificity/genetics ; Protein Binding

المؤلفون: Patwardhan RP; Department of Genome Sciences, University of Washington, Seattle, Washington, USA., Hiatt JB, Witten DM, Kim MJ, Smith RP, May D, Lee C, Andrie JM, Lee SI, Cooper GM, Ahituv N, Pennacchio LA, Shendure J

المصدر: Nature biotechnology [Nat Biotechnol] 2012 Feb 26; Vol. 30 (3), pp. 265-70. Date of Electronic Publication: 2012 Feb 26.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Enhancer Elements, Genetic*, Transcription Factors/*genetics, Animals ; Binding Sites ; Evolution, Molecular ; Genes, Reporter ; Haplotypes ; Humans ; Linear Models ; Liver/metabolism ; Mice ; Mutagenesis ; Mutation ; Transcription Factors/metabolism ; Transcription, Genetic

المؤلفون: Colbourne JK; Center for Genomics and Bioinformatics, Indiana University, 915 East Third Street, Bloomington, IN 47405, USA. jcolbour@indiana.edu, Pfrender ME, Gilbert D, Thomas WK, Tucker A, Oakley TH, Tokishita S, Aerts A, Arnold GJ, Basu MK, Bauer DJ, Cáceres CE, Carmel L, Casola C, Choi JH, Detter JC, Dong Q, Dusheyko S, Eads BD, Fröhlich T, Geiler-Samerotte KA, Gerlach D, Hatcher P, Jogdeo S, Krijgsveld J, Kriventseva EV, Kültz D, Laforsch C, Lindquist E, Lopez J, Manak JR, Muller J, Pangilinan J, Patwardhan RP, Pitluck S, Pritham EJ, Rechtsteiner A, Rho M, Rogozin IB, Sakarya O, Salamov A, Schaack S, Shapiro H, Shiga Y, Skalitzky C, Smith Z, Souvorov A, Sung W, Tang Z, Tsuchiya D, Tu H, Vos H, Wang M, Wolf YI, Yamagata H, Yamada T, Ye Y, Shaw JR, Andrews J, Crease TJ, Tang H, Lucas SM, Robertson HM, Bork P, Koonin EV, Zdobnov EM, Grigoriev IV, Lynch M, Boore JL

المصدر: Science (New York, N.Y.) [Science] 2011 Feb 04; Vol. 331 (6017), pp. 555-61.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, N.I.H., Intramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: American Association for the Advancement of Science Country of Publication: United States NLM ID: 0404511 Publication Model: Print Cited Medium: Internet ISSN: 1095-9203 (Electronic) Linking ISSN: 00368075 NLM ISO Abbreviation: Science Subsets: MEDLINE

مواضيع طبية MeSH: Ecosystem* , Genome*, Daphnia/*genetics, Adaptation, Physiological ; Amino Acid Sequence ; Animals ; Base Sequence ; Chromosome Mapping ; Daphnia/physiology ; Environment ; Evolution, Molecular ; Gene Conversion ; Gene Duplication ; Gene Expression ; Gene Expression Profiling ; Gene Expression Regulation ; Genes ; Genes, Duplicate ; Metabolic Networks and Pathways/genetics ; Molecular Sequence Annotation ; Molecular Sequence Data ; Multigene Family ; Phylogeny ; Sequence Analysis, DNA

المؤلفون: Kitzman JO; Department of Genome Sciences, University of Washington School of Medicine, Seattle, Washington, USA. kitz@uw.edu, Mackenzie AP, Adey A, Hiatt JB, Patwardhan RP, Sudmant PH, Ng SB, Alkan C, Qiu R, Eichler EE, Shendure J

المصدر: Nature biotechnology [Nat Biotechnol] 2011 Jan; Vol. 29 (1), pp. 59-63. Date of Electronic Publication: 2010 Dec 19.

نوع المنشور: Evaluation Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE

مواضيع طبية MeSH: Asian People/*genetics , Genome, Human/*genetics , Haplotypes/*genetics , High-Throughput Nucleotide Sequencing/*methods , Sequence Analysis, DNA/*methods, Base Sequence ; Cell Line ; Heterozygote ; Humans ; Models, Molecular ; Polymorphism, Single Nucleotide/genetics

المؤلفون: Hiatt JB; Department of Genome Sciences, University of Washington, Seattle, Washington, USA. jbhiatt@u.washington.edu, Patwardhan RP, Turner EH, Lee C, Shendure J

المصدر: Nature methods [Nat Methods] 2010 Feb; Vol. 7 (2), pp. 119-22. Date of Electronic Publication: 2010 Jan 17.

نوع المنشور: Evaluation Study; Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE

مواضيع طبية MeSH: Chromosome Mapping/*methods , Sequence Analysis, DNA/*methods, Base Sequence ; Expressed Sequence Tags ; Molecular Sequence Data