المؤلفون: Tarabini RF; Laboratory of Clinical and Experimental Immunology, Infant Center, School of Health Science, Pontifical Catholic University of Rio Grande do Sul (PUCRS), Porto Alegre, Brazil., Fioravanti Vieira G; Post-Graduation Program in Genetics and Molecular Biology, Universidade Federal do Rio Grande do Sul, Porto Alegre, Brazil.; Post-Graduation Program in Health and Human Development, Universidade La Salle, Canoas, Brazil., Rigo MM; Kavraki Lab, Department of Computer Science, Rice University, Houston, TX, USA. mauriciomr1985@gmail.com.; Center for Discovery and Innovation, Hackensack Meridian Health, Nutley, NJ, USA. mauriciomr1985@gmail.com., de Souza APD; Laboratory of Clinical and Experimental Immunology, Infant Center, School of Health Science, Pontifical Catholic University of Rio Grande do Sul (PUCRS), Porto Alegre, Brazil. ana.duarte@pucrs.br.

المصدر: Scientific reports [Sci Rep] 2024 Jul 19; Vol. 14 (1), pp. 16721. Date of Electronic Publication: 2024 Jul 19.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

مواضيع طبية MeSH: Glioblastoma*/immunology , Glioblastoma*/genetics , Glioblastoma*/therapy , CD8-Positive T-Lymphocytes*/immunology , Isocitrate Dehydrogenase*/genetics , Isocitrate Dehydrogenase*/immunology , Isocitrate Dehydrogenase*/chemistry , Tumor Suppressor Protein p53*/genetics , Tumor Suppressor Protein p53*/immunology , Antigen Presentation*/immunology, Humans ; Mutation ; PTEN Phosphohydrolase/genetics ; PTEN Phosphohydrolase/immunology ; PTEN Phosphohydrolase/chemistry ; ErbB Receptors/immunology ; ErbB Receptors/genetics ; Epitopes, T-Lymphocyte/immunology ; Epitopes, T-Lymphocyte/genetics ; Histocompatibility Antigens Class I/immunology ; Histocompatibility Antigens Class I/genetics ; Brain Neoplasms/immunology ; Brain Neoplasms/genetics ; Brain Neoplasms/therapy

المؤلفون: Ackerman WE 4th; Department of Obstetrics and Gynecology and AI.Health4All Center for Health Equity Using Machine Learning and Artificial Intelligence, University of Illinois College of Medicine, Chicago, USA., Rigo MM; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., DaSilva-Arnold SC; Department of Obstetrics and Gynecology, Hackensack University Medical Center, Hackensack NJ., Do C; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., Tariq M; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., Salas M; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., Castano A; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., Zamudio S; Department of Obstetrics and Gynecology, Hackensack University Medical Center, Hackensack NJ., Tycko B; Hackensack Meridian Health Center for Discovery and Innovation, Nutley, NJ., Illsley NP; Department of Obstetrics and Gynecology, Hackensack University Medical Center, Hackensack NJ.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jul 04. Date of Electronic Publication: 2024 Jul 04.

نوع المنشور: Journal Article; Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Fasoulis R; Department of Computer Science, Rice University, Houston, Texas 77005, United States., Rigo MM; Department of Computer Science, Rice University, Houston, Texas 77005, United States., Lizée G; Department of Melanoma Medical Oncology─Research, The University of Texas MD Anderson Cancer Center, Houston, Texas 77054, United States., Antunes DA; Department of Biology and Biochemistry, University of Houston, Houston, Texas 77004, United States., Kavraki LE; Department of Computer Science, Rice University, Houston, Texas 77005, United States.

المصدر: Journal of chemical information and modeling [J Chem Inf Model] 2024 Mar 11; Vol. 64 (5), pp. 1730-1750. Date of Electronic Publication: 2024 Feb 28.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: American Chemical Society Country of Publication: United States NLM ID: 101230060 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1549-960X (Electronic) Linking ISSN: 15499596 NLM ISO Abbreviation: J Chem Inf Model Subsets: MEDLINE

مواضيع طبية MeSH: Peptides*/chemistry , Hominidae*/metabolism, Animals ; Major Histocompatibility Complex ; Receptors, Antigen, T-Cell/genetics ; Receptors, Antigen, T-Cell/metabolism ; Protein Processing, Post-Translational ; Protein Binding

المؤلفون: Fasoulis R; Department of Computer Science, Rice University, 6100 Main St, Houston, 77005, TX, United States., Rigo MM; Department of Computer Science, Rice University, 6100 Main St, Houston, 77005, TX, United States., Antunes DA; Department of Biology and Biochemistry, University of Houston, 4800 Calhoun Rd, Houston, 77004, TX, United States., Paliouras G; Institute of Informatics and Telecommunications, NCSR Demokritos, Patr. Gregoriou E and 27 Neapoleos St, Athens, 15341, Greece., Kavraki LE; Department of Computer Science, Rice University, 6100 Main St, Houston, 77005, TX, United States.

المصدر: Immunoinformatics (Amsterdam, Netherlands) [Immunoinformatics (Amst)] 2024 Mar; Vol. 13. Date of Electronic Publication: 2023 Dec 21.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 9918266300606676 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2667-1190 (Electronic) Linking ISSN: 26671190 NLM ISO Abbreviation: Immunoinformatics (Amst) Subsets: PubMed not MEDLINE

المؤلفون: Borges TJ, Lima K, Murshid A, Lape IT, Zhao Y, Rigo MM, Lang BJ, Siddiqui SS, Hui E, Riella LV, Bonorino C, Calderwood SK

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Dec 04. Date of Electronic Publication: 2023 Dec 04.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Machado CR; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Braun AM; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Ceolin J; Federal University of Santa Maria, Rio Grande do Sul, Brazil., Richter SA; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Ribeiro MC; Integrated Faculty of Taquara, RS, Brazil., Santos LD; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Laboratory of Clinical and Experimental Immunology, Health and Life Science School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Rigo MM; Kavraki Lab, Department of Computer Science, Rice University, Houston, TX., de Souza APD; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Laboratory of Clinical and Experimental Immunology, Health and Life Science School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Padoin AV; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Center for Obesity and Metabolic Syndrome, Hospital São Lucas, Porto Alegre, RS, Brazil., Alves LB; Center for Obesity and Metabolic Syndrome, Hospital São Lucas, Porto Alegre, RS, Brazil., Mottin CC; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Center for Obesity and Metabolic Syndrome, Hospital São Lucas, Porto Alegre, RS, Brazil., Drumond Costa CA; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Health and Life Science School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil., Mundstock E; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil; Department of Education, Sport, and Leisure of Canela, RS, Brazil., Cañon-Montañez W; Faculty of Nursing, Universidad de Antioquia, Medellín, Colombia., Ayala CO; Medicine School, Pontifical Catholic University of Rio Grande do Sul, Porto Alegre, RS, Brazil. Electronic address: http://twitter.com/CamilaOAyala2., Mattiello R; Postgraduate Program in Epidemiology, Universidade Federal do Rio Grande do Sul, Porto Alegre, RS, Brazil. Electronic address: rita.mattiello@ufrgs.br.

المصدر: Surgery [Surgery] 2023 Nov; Vol. 174 (5), pp. 1114-1144. Date of Electronic Publication: 2023 Aug 24.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Mosby Country of Publication: United States NLM ID: 0417347 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1532-7361 (Electronic) Linking ISSN: 00396060 NLM ISO Abbreviation: Surgery Subsets: MEDLINE

المؤلفون: Conev A; Department of Computer Science, Rice University, Houston 77005, TX, USA., Rigo MM; Department of Computer Science, Rice University, Houston 77005, TX, USA., Devaurs D; MRC Institute of Genetics and Cancer, University of Edinburgh, Edinburgh EH4 2XU, UK., Fonseca AF; Department of Biology and Biochemistry, University of Houston, Houston 77004, TX, USA., Kalavadwala H; Department of Biology and Biochemistry, University of Houston, Houston 77004, TX, USA., de Freitas MV; Department of Biology and Biochemistry, University of Houston, Houston 77004, TX, USA., Clementi C; Department of Physics, Freie Universität Berlin, Berlin 14195, Germany., Zanatta G; Department of Biophysics, Institute of Biosciences, Federal University of Rio Grande do Sul, Porto Alegre 91501-970, Brazil., Antunes DA; Department of Biology and Biochemistry, University of Houston, Houston 77004, TX, USA., Kavraki LE; Department of Computer Science, Rice University, Houston 77005, TX, USA.

المصدر: Briefings in bioinformatics [Brief Bioinform] 2023 Jul 20; Vol. 24 (4).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 100912837 Publication Model: Print Cited Medium: Internet ISSN: 1477-4054 (Electronic) Linking ISSN: 14675463 NLM ISO Abbreviation: Brief Bioinform Subsets: MEDLINE

مواضيع طبية MeSH: Molecular Dynamics Simulation* , Proteins*/chemistry, Protein Conformation

المؤلفون: Conev A; Department of Computer Science, Rice University, Houston, TX 77005, USA., Rigo MM; Department of Computer Science, Rice University, Houston, TX 77005, USA., Devaurs D; MRC Institute of Genetics and Cancer, University of Edinburgh, EH4 2XU, UK., Fonseca AF; Department of Biology and Biochemistry, University of Houston, Houston, TX 77004, USA., Kalavadwala H; Department of Biology and Biochemistry, University of Houston, Houston, TX 77004, USA., de Freitas MV; Department of Biology and Biochemistry, University of Houston, Houston, TX 77004, USA., Clementi C; Department of Physics, Freie Universität Berlin, Berlin, 14195 Germany., Zanatta G; Department of Biophysics, Institute of Biosciences, Federal University of Rio Grande do Sul, Porto Alegre, 91501-970 Brazil., Antunes DA; Department of Biology and Biochemistry, University of Houston, Houston, TX 77004, USA., Kavraki L; Department of Computer Science, Rice University, Houston, TX 77005, USA.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Apr 28. Date of Electronic Publication: 2023 Apr 28.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Hall-Swan S; Department of Computer Science, Rice University, Houston, TX, United States., Slone J; Department of Computer Science, Rice University, Houston, TX, United States., Rigo MM; Department of Computer Science, Rice University, Houston, TX, United States., Antunes DA; Department of Biology and Biochemistry, University of Houston, Houston, TX, United States., Lizée G; Department of Melanoma Medical Oncology, University of Texas MD Anderson Cancer Center, Houston, TX, United States., Kavraki LE; Department of Computer Science, Rice University, Houston, TX, United States.

المصدر: Frontiers in immunology [Front Immunol] 2023 Apr 28; Vol. 14, pp. 1108303. Date of Electronic Publication: 2023 Apr 28 (Print Publication: 2023).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Frontiers Research Foundation] Country of Publication: Switzerland NLM ID: 101560960 Publication Model: eCollection Cited Medium: Internet ISSN: 1664-3224 (Electronic) Linking ISSN: 16643224 NLM ISO Abbreviation: Front Immunol Subsets: MEDLINE

مواضيع طبية MeSH: Peptides* , T-Lymphocytes, Cytotoxic*, Amino Acid Sequence ; Clone Cells

المؤلفون: Jackson KR; University of Texas MD Anderson Cancer Center, UTHealth Graduate School of Biomedical Sciences, Houston, TX, USA., Antunes DA; Department of Biology and Biochemistry, University of Houston, Houston, TX, USA., Talukder AH; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Maleki AR; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Amagai K; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Salmon A; University of Texas MD Anderson Cancer Center, UTHealth Graduate School of Biomedical Sciences, Houston, TX, USA., Katailiha AS; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Chiu Y; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Fasoulis R; Department of Computer Science, Rice University, Houston, TX, USA., Rigo MM; Department of Computer Science, Rice University, Houston, TX, USA., Abella JR; Department of Computer Science, Rice University, Houston, TX, USA., Melendez BD; University of Texas MD Anderson Cancer Center, UTHealth Graduate School of Biomedical Sciences, Houston, TX, USA., Li F; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Sun Y; University of Texas MD Anderson Cancer Center, UTHealth Graduate School of Biomedical Sciences, Houston, TX, USA., Sonnemann HM; University of Texas MD Anderson Cancer Center, UTHealth Graduate School of Biomedical Sciences, Houston, TX, USA., Belousov V; BostonGene Corporation, Waltham, MA, USA., Frenkel F; BostonGene Corporation, Waltham, MA, USA., Justesen S; Immunitrack Aps, Copenhagen, Denmark., Makaju A; ThermoFisher Scientific, San Jose, CA, USA., Liu Y; ThermoFisher Scientific, San Jose, CA, USA., Horn D; ThermoFisher Scientific, San Jose, CA, USA., Lopez-Ferrer D; ThermoFisher Scientific, San Jose, CA, USA., Huhmer AF; ThermoFisher Scientific, San Jose, CA, USA., Hwu P; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Roszik J; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA., Hawke D; Department of Systems Biology, UT MD Anderson Cancer Center, Houston, TX, USA., Kavraki LE; Department of Computer Science, Rice University, Houston, TX, USA., Lizée G; Department of Melanoma, UT MD Anderson Cancer Center, Houston, TX, USA.

المصدر: PNAS nexus [PNAS Nexus] 2022 Jul 27; Vol. 1 (3), pp. pgac124. Date of Electronic Publication: 2022 Jul 27 (Print Publication: 2022).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press on behalf of the National Academy of Sciences Country of Publication: England NLM ID: 9918367777906676 Publication Model: eCollection Cited Medium: Internet ISSN: 2752-6542 (Electronic) Linking ISSN: 27526542 NLM ISO Abbreviation: PNAS Nexus Subsets: PubMed not MEDLINE