المؤلفون: Gao J; School of Computer Science, University of Science and Technology of China, Heifei, Anhui 230027, P. R. China.; Key Laboratory on High Performance Computing, Anhui Province, P. R. China., Xu Y; School of Computer Science, University of Science and Technology of China, Heifei, Anhui 230027, P. R. China.; Key Laboratory on High Performance Computing, Anhui Province, P. R. China.

المصدر: Journal of bioinformatics and computational biology [J Bioinform Comput Biol] 2024 Aug; Vol. 22 (4), pp. 2450019. Date of Electronic Publication: 2024 Aug 31.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: World Scientific Publishing Europe Ltd Country of Publication: Singapore NLM ID: 101187344 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1757-6334 (Electronic) Linking ISSN: 02197200 NLM ISO Abbreviation: J Bioinform Comput Biol Subsets: MEDLINE

مواضيع طبية MeSH: Algorithms* , Sequence Alignment*/methods , Sequence Alignment*/statistics & numerical data , Sequence Analysis, DNA*/methods , Sequence Analysis, DNA*/statistics & numerical data, Humans ; Genome, Human ; Software ; Genomics/methods ; Genomics/statistics & numerical data ; Genome

المؤلفون: Jiang Y; College of Marine Sciences, South China Agricultural University, Guangzhou, 510642, China., Zhu Z; College of Marine Sciences, South China Agricultural University, Guangzhou, 510642, China., Chen J; College of Marine Sciences, South China Agricultural University, Guangzhou, 510642, China., Qin Q; College of Marine Sciences, South China Agricultural University, Guangzhou, 510642, China; Nansha-South China Agricultural University Fishery Research Institute, Guangzhou, 511457, China. Electronic address: qinqw@scau.edu.cn., Wei S; College of Marine Sciences, South China Agricultural University, Guangzhou, 510642, China; Nansha-South China Agricultural University Fishery Research Institute, Guangzhou, 511457, China. Electronic address: weisn@scau.edu.cn.

المصدر: Fish & shellfish immunology [Fish Shellfish Immunol] 2024 Oct; Vol. 153, pp. 109837. Date of Electronic Publication: 2024 Aug 13.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 9505220 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9947 (Electronic) Linking ISSN: 10504648 NLM ISO Abbreviation: Fish Shellfish Immunol Subsets: MEDLINE

مواضيع طبية MeSH: NLR Family, Pyrin Domain-Containing 3 Protein*/genetics , NLR Family, Pyrin Domain-Containing 3 Protein*/immunology , NLR Family, Pyrin Domain-Containing 3 Protein*/metabolism , Fish Diseases*/immunology , Fish Proteins*/genetics , Fish Proteins*/immunology , Fish Proteins*/chemistry , Bass*/immunology , Bass*/genetics , Up-Regulation* , Sequence Alignment*/veterinary , Gene Expression Regulation*/immunology , Phylogeny* , Caspase 1*/genetics , Caspase 1*/immunology , Caspase 1*/metabolism, Animals ; Amino Acid Sequence ; DNA Virus Infections/immunology ; DNA Virus Infections/veterinary ; Immunity, Innate/genetics ; Gene Expression Profiling/veterinary ; Iridoviridae

SCR Organism: Infectious spleen and kidney necrosis virus

المؤلفون: Xue Y; Key Laboratory of Aquacultural Biotechnology (Ningbo University), Ministry of Education, Ningbo, Zhejiang, China. Electronic address: 18738808286@163.com., Liu X; College of Life Sciences, Yantai University, Yantai, China. Electronic address: liuxiumei@ytu.edu.cn., Wang Y; Key Laboratory of Aquacultural Biotechnology (Ningbo University), Ministry of Education, Ningbo, Zhejiang, China. Electronic address: wangyajun@nbu.edu.cn., Chang J; College of Marine Life Science, Ocean University of China, Qingdao, China. Electronic address: jingchouc@163.com., Wang X; Key Laboratory of Aquacultural Biotechnology (Ningbo University), Ministry of Education, Ningbo, Zhejiang, China; National Engineering Research Laboratory of Marine Biotechnology and Engineering, Ningbo University, Ningbo, Zhejiang, China; Collaborative Innovation Center for Zhejiang Marine High-efficiency and Healthy Aquaculture, Ningbo University, Ningbo, Zhejiang, China; Key Laboratory of Green Mariculture (Co-construction By Ministry and Province), Ministry of Agriculture and Rural, Ningbo University, China. Electronic address: wangxubo@nbu.edu.cn.

المصدر: Fish & shellfish immunology [Fish Shellfish Immunol] 2024 Oct; Vol. 153, pp. 109844. Date of Electronic Publication: 2024 Aug 20.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 9505220 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9947 (Electronic) Linking ISSN: 10504648 NLM ISO Abbreviation: Fish Shellfish Immunol Subsets: MEDLINE

مواضيع طبية MeSH: Fish Diseases*/immunology , Cystatins*/genetics , Cystatins*/immunology , Cystatins*/chemistry , Fish Proteins*/genetics , Fish Proteins*/immunology , Fish Proteins*/chemistry , Immunity, Innate*/genetics , Perciformes*/immunology , Perciformes*/genetics , Amino Acid Sequence* , Sequence Alignment* , Nocardia*/immunology, Animals ; Nocardia Infections/immunology ; Nocardia Infections/veterinary ; Phylogeny ; Gene Expression Regulation/immunology ; Gene Expression Profiling/veterinary

SCR Organism: Nocardia seriolae

المؤلفون: Zhang L; Hainan Key Laboratory of Tropical Aquatic Germplasm, Sanya Oceanographic Institution, Ocean University of China, Sanya, 572024, China; MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, 266003, China., Wei C; Hainan Key Laboratory of Tropical Aquatic Germplasm, Sanya Oceanographic Institution, Ocean University of China, Sanya, 572024, China; MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, 266003, China., Guo Y; MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, 266003, China. Electronic address: guoying@ouc.edu.cn., Hu J; Hainan Key Laboratory of Tropical Aquatic Germplasm, Sanya Oceanographic Institution, Ocean University of China, Sanya, 572024, China; MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, 266003, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China., Wang M; Hainan Key Laboratory of Tropical Aquatic Germplasm, Sanya Oceanographic Institution, Ocean University of China, Sanya, 572024, China; MOE Key Laboratory of Marine Genetics and Breeding, Ocean University of China, Qingdao, 266003, China; Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Guangzhou, 511458, China. Electronic address: wangmengqiang@ouc.edu.cn.

المصدر: Fish & shellfish immunology [Fish Shellfish Immunol] 2024 Oct; Vol. 153, pp. 109833. Date of Electronic Publication: 2024 Aug 13.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 9505220 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9947 (Electronic) Linking ISSN: 10504648 NLM ISO Abbreviation: Fish Shellfish Immunol Subsets: MEDLINE

مواضيع طبية MeSH: Lectins, C-Type*/genetics , Lectins, C-Type*/immunology , Lectins, C-Type*/chemistry , Bivalvia*/immunology , Bivalvia*/genetics , Amino Acid Sequence* , Phylogeny* , Immunity, Innate*/genetics , Sequence Alignment*/veterinary, Animals ; Base Sequence ; Gene Expression Regulation/immunology ; Gene Expression Profiling/veterinary ; Vibrio/physiology

المؤلفون: Yang Y; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China. Electronic address: yangyb1988@126.com., He H; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China., Dong J; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China., Liu Y; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China., Yang Q; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China., Ai X; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China. Electronic address: aixh@yfi.ac.cn., Zhu X; Yangtze River Fisheries Research Institute, Chinese Academy of Fishery Sciences, Wuhan, 430223, China. Electronic address: xzhu0917@163.com.

المصدر: Fish & shellfish immunology [Fish Shellfish Immunol] 2024 Oct; Vol. 153, pp. 109838. Date of Electronic Publication: 2024 Aug 15.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 9505220 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9947 (Electronic) Linking ISSN: 10504648 NLM ISO Abbreviation: Fish Shellfish Immunol Subsets: MEDLINE

مواضيع طبية MeSH: Ictaluridae*/immunology , Ictaluridae*/genetics , Fish Proteins*/genetics , Fish Proteins*/immunology , Fish Proteins*/chemistry , Interleukins*/genetics , Interleukins*/immunology , Immunity, Innate*/genetics , Fish Diseases*/immunology , Amino Acid Sequence* , Sequence Alignment*/veterinary , Gene Expression Regulation*/immunology , Phylogeny*, Animals ; Gene Expression Profiling/veterinary ; Base Sequence ; DNA, Complementary/genetics

المؤلفون: Gao D; School of Mathematics and Statistics, Heze University, Heze, China.

المصدر: PloS one [PLoS One] 2024 Sep 12; Vol. 19 (9), pp. e0306480. Date of Electronic Publication: 2024 Sep 12 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101285081 Publication Model: eCollection Cited Medium: Internet ISSN: 1932-6203 (Electronic) Linking ISSN: 19326203 NLM ISO Abbreviation: PLoS One Subsets: MEDLINE

مواضيع طبية MeSH: Sequence Alignment*/methods, Algorithms ; Sequence Analysis, DNA/methods ; Models, Genetic ; Models, Statistical ; Computational Biology/methods

المؤلفون: Erckert K; TUM School of Computation, Information and Technology, Bioinformatics & Computational Biology - i12, Boltzmannstr. 3, 85748, Garching/Munich, Germany. kyra.erckert@tum.de.; TUM Graduate School, Center of Doctoral Studies in Informatics and Its Applications (CeDoSIA), Boltzmannstr. 11, 85748, Garching, Germany. kyra.erckert@tum.de., Rost B; TUM School of Computation, Information and Technology, Bioinformatics & Computational Biology - i12, Boltzmannstr. 3, 85748, Garching/Munich, Germany.; Institute for Advanced Study (TUM-IAS), Lichtenbergstr. 2a, 85748, Garching/Munich, Germany.; TUM School of Life Sciences Weihenstephan (TUM-WZW), Alte Akademie 8, Freising, Germany.

المصدر: Scientific reports [Sci Rep] 2024 Sep 05; Vol. 14 (1), pp. 20692. Date of Electronic Publication: 2024 Sep 05.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/metabolism , Proteins*/genetics , Proteins*/chemistry , Evolution, Molecular* , Sequence Alignment*/methods, Computational Biology/methods ; Algorithms ; Software ; Sequence Analysis, Protein/methods

المؤلفون: Becker F; Institute of Mathematics and Computer Science, University of Greifswald, 17489 Greifswald, Germany., Stanke M; Institute of Mathematics and Computer Science, University of Greifswald, 17489 Greifswald, Germany.

المصدر: Bioinformatics (Oxford, England) [Bioinformatics] 2024 Sep 01; Vol. 40 (Suppl 2), pp. ii79-ii86.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 9808944 Publication Model: Print Cited Medium: Internet ISSN: 1367-4811 (Electronic) Linking ISSN: 13674803 NLM ISO Abbreviation: Bioinformatics Subsets: MEDLINE

مواضيع طبية MeSH: Markov Chains* , Sequence Alignment*/methods , Proteins*/chemistry , Sequence Analysis, Protein*/methods, Software ; Deep Learning ; Algorithms ; Computational Biology/methods ; Amino Acid Sequence

المؤلفون: Malik A; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Zhang L; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Gautam M; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Dai N; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Li S; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Zhang H; School of EECS, Oregon State University, Corvallis, OR 97330, USA., Mathews DH; Dept. of Biochemistry & Biophysics, University of Rochester Medical Center, Rochester, NY 14642, USA; Center for RNA Biology, University of Rochester Medical Center, Rochester, NY 14642, USA; Dept. of Biostatistics & Computational Biology, University of Rochester Medical Center, Rochester, NY 14642, USA., Huang L; School of EECS, Oregon State University, Corvallis, OR 97330, USA; Dept. of Biochemistry & Biophysics, Oregon State University, Corvallis, OR 97330, USA. Electronic address: liang.huang.sh@gmail.com.

المصدر: Journal of molecular biology [J Mol Biol] 2024 Sep 01; Vol. 436 (17), pp. 168694. Date of Electronic Publication: 2024 Jul 04.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Country of Publication: Netherlands NLM ID: 2985088R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1089-8638 (Electronic) Linking ISSN: 00222836 NLM ISO Abbreviation: J Mol Biol Subsets: MEDLINE

مواضيع طبية MeSH: SARS-CoV-2*/genetics , RNA, Viral*/genetics , RNA, Viral*/chemistry , Nucleic Acid Conformation* , COVID-19*/virology , Sequence Alignment*/methods, Genome, Viral ; Software ; Computational Biology/methods ; Humans ; Sequence Analysis, RNA/methods ; Algorithms ; RNA/chemistry

المؤلفون: Qu Y; School of Agriculture, Ludong University, Yantai, 264025, China., Cui J; School of Agriculture, Ludong University, Yantai, 264025, China., Ma J; School of Agriculture, Ludong University, Yantai, 264025, China., Chen J; School of Agriculture, Ludong University, Yantai, 264025, China., Zhang H; School of Agriculture, Ludong University, Yantai, 264025, China., Zhao Y; School of Agriculture, Ludong University, Yantai, 264025, China., Yu Z; School of Agriculture, Ludong University, Yantai, 264025, China., Bao Z; School of Agriculture, Ludong University, Yantai, 264025, China., Han Y; School of Agriculture, Ludong University, Yantai, 264025, China., Liu Y; School of Agriculture, Ludong University, Yantai, 264025, China., Huang B; School of Agriculture, Ludong University, Yantai, 264025, China. Electronic address: byhuang@ldu.edu.cn., Wang X; School of Agriculture, Ludong University, Yantai, 264025, China. Electronic address: wangxiaotong999@163.com.

المصدر: Fish & shellfish immunology [Fish Shellfish Immunol] 2024 Sep; Vol. 152, pp. 109764. Date of Electronic Publication: 2024 Jul 14.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Academic Press Country of Publication: England NLM ID: 9505220 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1095-9947 (Electronic) Linking ISSN: 10504648 NLM ISO Abbreviation: Fish Shellfish Immunol Subsets: MEDLINE

مواضيع طبية MeSH: Immunity, Innate*/genetics , Phylogeny* , Poly I-C*/pharmacology , Amino Acid Sequence* , Lipopolysaccharides*/pharmacology , Strongylocentrotus*/genetics , Strongylocentrotus*/immunology , Sequence Alignment*/veterinary , Gene Expression Regulation*/immunology, Animals ; Cloning, Molecular ; Gene Expression Profiling/veterinary ; Humans ; NF-kappa B/genetics ; NF-kappa B/metabolism ; NF-kappa B/immunology ; Base Sequence ; Proto-Oncogene Proteins c-rel/genetics ; Proto-Oncogene Proteins c-rel/metabolism ; HEK293 Cells