المؤلفون: Martin, DP, Weaver, S, Tegally, H, San, EJ, Shank, SD, Wilkinson, E, Lucaci, AG, Giandhari, J, Naidoo, S, Pillay, Y, Singh, L, Lessells, RJ, Gupta, RK, Wertheim, JO, Nekturenko, A, Murrell, B, Harkins, GW, Lemey, P, MacLean, OA, Robertson, DL, de Oliveira, T, Kosakovsky Pond, SL

المصدر: medRxiv : the preprint server for health sciences.

مصطلحات موضوعية: Medicin och hälsovetenskap

URL الوصول: http://kipublications.ki.se/Default.aspx?queryparsed=id:233688681

المؤلفون: Samsunder N; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., Lustig G; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., de Vos M; FIND, Geneva, Switzerland., Ngcapu S; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; Department of Medical Microbiology, University of KwaZulu-Natal, Durban, South Africa., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform, Durban, South Africa., Tshiabuila D; KwaZulu-Natal Research Innovation and Sequencing Platform, Durban, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform, Durban, South Africa., Lewis L; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., Kharsany AB; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; Department of Medical Microbiology, University of KwaZulu-Natal, Durban, South Africa., Cawood C; Epicentre AIDS Risk Management (Pty) Limited, Durban, South Africa., de Oliveira T; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; KwaZulu-Natal Research Innovation and Sequencing Platform, Durban, South Africa; Centre for Epidemic Response and Innovation, School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa; Department of Global Health, University of Washington, Seattle, United States of America., Abdool Karim Q; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; Department of Epidemiology, Columbia University, New York City, United States of America., Abdool Karim S; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; Department of Epidemiology, Columbia University, New York City, United States of America., Escadafal C; FIND, Geneva, Switzerland., Naidoo K; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; MRC-CAPRISA HIV-TB Pathogenesis and Treatment Research Unit, Doris Duke Medical Research Institute, University of KwaZulu-Natal, South Africa., Sivro A; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa; Department of Medical Microbiology, University of KwaZulu-Natal, Durban, South Africa; JC Wilt Infectious Disease Research Centre, National Microbiology laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada. Electronic address: aida.sivro@caprisa.org.

المصدر: Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology [J Clin Virol] 2023 Aug; Vol. 165, pp. 105498. Date of Electronic Publication: 2023 Jun 02.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Elsevier Science Country of Publication: Netherlands NLM ID: 9815671 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1873-5967 (Electronic) Linking ISSN: 13866532 NLM ISO Abbreviation: J Clin Virol Subsets: MEDLINE

مواضيع طبية MeSH: SARS-CoV-2* , COVID-19*/diagnosis, Humans ; South Africa ; Biological Assay ; Nucleocapsid Proteins ; Sensitivity and Specificity

SCR Organism: SARS-CoV-2 variants

المؤلفون: Seadawy MG; Biological Prevention Department, Chemical Warfare, 4.5 km Suez-Cairo Rd, Almaza, Cairo 11351, Egypt., Zekri ARN; National Cancer Institute, Cairo University, Giza 12613, Egypt., Saeed AA; National Cancer Institute, Cairo University, Giza 12613, Egypt., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform, School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban 4001, South Africa., Ageez AM; Faculty of Biotechnology, MSA University, 6 October City 12451, Egypt.

المصدر: Life (Basel, Switzerland) [Life (Basel)] 2022 Oct 27; Vol. 12 (11). Date of Electronic Publication: 2022 Oct 27.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: MDPI AG Country of Publication: Switzerland NLM ID: 101580444 Publication Model: Electronic Cited Medium: Print ISSN: 2075-1729 (Print) Linking ISSN: 20751729 NLM ISO Abbreviation: Life (Basel) Subsets: PubMed not MEDLINE

المؤلفون: Giovanetti M; Laboratório de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Department of Science and Technology for Humans and the Environment, University of Campus Bio-Medico di Roma, Rome, Italy., Slavov SN; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil.; Butantan Institute, São Paulo, Brazil., Fonseca V; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Pan American Health Organization (PAHO)/World Health Organization (WHO), Brasilia, Distrito Federal, Brazil.; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Wilkinson E; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Tegally H; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Patané JSL; Butantan Institute, São Paulo, Brazil., Viala VL; Butantan Institute, São Paulo, Brazil., San EJ; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Rodrigues ES; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Santos EV; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Aburjaile F; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil., Xavier J; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Fritsch H; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Adelino TER; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Pereira F; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Leal A; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Iani FCM; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., de Carvalho Pereira G; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Vazquez C; Laboratório Central de Salud Pública, Asunción, Paraguay., Sanabria GME; Laboratório Central de Salud Pública, Asunción, Paraguay.; Instituto Regional de Investigación em Salud, Universidad Nacional del Caaguazú, Caaguazú, Paraguay.; Laboratório de Biología Molecular, Hospital Regional de Coronel Oviedo, Ministerio de Salud Pública y Bienestar Social, Asunción, Paraguay., Oliveira EC; Laboratório Central de Saúde Pública do Estado de Mato Grosso (LACEN-MT), Cuiabá, Mato Grosso, Brazil., Demarchi L; Laboratório Central de Saúde Pública do Estado de Mato Grosso do Sul (LACEN-MS), Campo Grande, Mato Grosso do Sul, Brazil., Croda J; Universidade Federal do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., Dos Santos Bezerra R; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Paola Oliveira de Lima L; Butantan Institute, São Paulo, Brazil., Martins AJ; Butantan Institute, São Paulo, Brazil., Renata Dos Santos Barros C; Butantan Institute, São Paulo, Brazil., Marqueze EC; Butantan Institute, São Paulo, Brazil., de Souza Todao Bernardino J; Butantan Institute, São Paulo, Brazil., Moretti DB; Butantan Institute, São Paulo, Brazil., Brassaloti RA; Centro de Genômica Funcional da ESALQ, University of São Paulo, Piracicaba, São Paulo, Brazil., de Lello Rocha Campos Cassano R; Centro de Genômica Funcional da ESALQ, University of São Paulo, Piracicaba, São Paulo, Brazil., Mariani PDSC; NGS Soluções Genômicas, Piracicaba, São Paulo, Brazil., Kitajima JP; Mendelics Análise Genômica, São Paulo, Brazil., Santos B; Mendelics Análise Genômica, São Paulo, Brazil., Proto-Siqueira R; Instituto de Biologia Molecular, Laboratório Antonello, Rio Grande do Sul, Brazil., Cantarelli VV; Universidade Federal de Ciencias da Saúde de Porto Alegre (UFCSPA), Universidade Feevale, Grupo Exame Laboratórios, Rio Grande do Sul, Brazil., Tosta S; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil.; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Nardy VB; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Reboredo de Oliveira da Silva L; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Gómez MKA; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Lima JG; Laboratório Central de Saúde Pública do Estado da Bahia (LACEN-BA), Salvador, Bahia, Brazil., Ribeiro AA; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Guimarães NR; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil., Watanabe LT; Laboratório Central de Saúde Pública do Estado de Mato Grosso (LACEN-MT), Cuiabá, Mato Grosso, Brazil., Barbosa Da Silva L; Laboratório Central de Saúde Pública do Estado de Mato Grosso (LACEN-MT), Cuiabá, Mato Grosso, Brazil., da Silva Ferreira R; Laboratório Central de Saúde Pública do Estado de Mato Grosso (LACEN-MT), Cuiabá, Mato Grosso, Brazil., da Penha MPF; Vigilancia em Saúde do Estado de Mato Grosso, Cuiabá, Mato Grosso, Brazil., Ortega MJ; Laboratório Central de Salud Pública, Asunción, Paraguay., de la Fuente AG; Laboratório Central de Salud Pública, Asunción, Paraguay., Villalba S; Laboratório Central de Salud Pública, Asunción, Paraguay., Torales J; Laboratório Central de Salud Pública, Asunción, Paraguay., Gamarra ML; Laboratório Central de Salud Pública, Asunción, Paraguay., Aquino C; Laboratório Central de Salud Pública, Asunción, Paraguay., Figueredo GPM; Laboratório Central de Salud Pública, Asunción, Paraguay.; Instituto Regional de Investigación em Salud, Universidad Nacional del Caaguazú, Caaguazú, Paraguay.; Laboratório de Biología Molecular, Hospital Regional de Coronel Oviedo, Ministerio de Salud Pública y Bienestar Social, Asunción, Paraguay., Fava WS; Universidade Federal do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., Motta-Castro ARC; Universidade Federal do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., Venturini J; Universidade Federal do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., do Vale Leone de Oliveira SM; Universidade Federal do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., Gonçalves CCM; Secretaria de Saude do Estado do Mato Grosso do Sul, Campo Grande, Mato Grosso do Sul, Brazil., do Carmo Debur Rossa M; Laboratório Central de Saúde Pública do Estado do Paraná (Lacen-PR), Curitiba, Paraná, Brazil., Becker GN; Laboratório Central de Saúde Pública do Estado do Paraná (Lacen-PR), Curitiba, Paraná, Brazil., Giacomini MP; Laboratório Central de Saúde Pública do Estado do Paraná (Lacen-PR), Curitiba, Paraná, Brazil., Marques NQ; Laboratório Central de Saúde Pública do Estado do Paraná (Lacen-PR), Curitiba, Paraná, Brazil., Riediger IN; Laboratório Central de Saúde Pública do Estado do Paraná (Lacen-PR), Curitiba, Paraná, Brazil., Raboni S; Hospital de Clínicas da Universidade Federal do Paraná, Curitiba, Paraná, Brazil., Mattoso G; Laboratório de Virologia Molecular, Instituto Carlos Chagas/Fiocruz-PR, Curitiba, Paraná, Brazil., Cataneo AD; Laboratório de Virologia Molecular, Instituto Carlos Chagas/Fiocruz-PR, Curitiba, Paraná, Brazil., Zanluca C; Laboratório de Virologia Molecular, Instituto Carlos Chagas/Fiocruz-PR, Curitiba, Paraná, Brazil., Duarte Dos Santos CN; Laboratório de Virologia Molecular, Instituto Carlos Chagas/Fiocruz-PR, Curitiba, Paraná, Brazil., Assato PA; Department of Bioprocesses and Biotechnology, School of Agricultural Sciences, São Paulo State University (UNESP), Botucatu, São Paulo, Brazil., Allan da Silva da Costa F; Department of Bioprocesses and Biotechnology, School of Agricultural Sciences, São Paulo State University (UNESP), Botucatu, São Paulo, Brazil., Poleti MD; Department of Veterinary Medicine, School of Animal Science and Food Engineering, University of São Paulo, Pirassununga, São Paulo, Brazil., Lesbon JCC; Department of Veterinary Medicine, School of Animal Science and Food Engineering, University of São Paulo, Pirassununga, São Paulo, Brazil., Mattos EC; Department of Veterinary Medicine, School of Animal Science and Food Engineering, University of São Paulo, Pirassununga, São Paulo, Brazil., Banho CA; Medicine School of São José do Rio Preto (FAMERP), São José do Rio Preto, São Paulo, Brazil., Sacchetto L; Medicine School of São José do Rio Preto (FAMERP), São José do Rio Preto, São Paulo, Brazil., Moraes MM; Medicine School of São José do Rio Preto (FAMERP), São José do Rio Preto, São Paulo, Brazil., Grotto RMT; Department of Bioprocesses and Biotechnology, School of Agricultural Sciences, São Paulo State University (UNESP), Botucatu, São Paulo, Brazil.; Molecular Biology Laboratory, Applied Biotechnology Laboratory, Clinical Hospital of the Botucatu Medical School, São Paulo, Brazil., Souza-Neto JA; Department of Bioprocesses and Biotechnology, School of Agricultural Sciences, São Paulo State University (UNESP), Botucatu, São Paulo, Brazil., Nogueira ML; Medicine School of São José do Rio Preto (FAMERP), São José do Rio Preto, São Paulo, Brazil., Fukumasu H; Department of Veterinary Medicine, School of Animal Science and Food Engineering, University of São Paulo, Pirassununga, São Paulo, Brazil., Coutinho LL; Centro de Genômica Funcional da ESALQ, University of São Paulo, Piracicaba, São Paulo, Brazil., Calado RT; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil., Neto RM; Butantan Institute, São Paulo, Brazil., Bispo de Filippis AM; Laboratório de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil., Venancio da Cunha R; Fundação Oswaldo Cruz, Bio-Manguinhos, Rio de Janeiro, Rio de Janeiro, Brazil., Freitas C; Coordenação Geral dos Laboratórios de Saúde Pública/Secretaria de Vigilância em Saúde, Ministério da Saúde, (CGLAB/SVS-MS), Brasília, Distrito Federal, Brazil., Peterka CRL; Coordenação Geral das Arboviroses, Secretaria de Vigilância em Saúde/Ministério da Saúde (CGARB/SVS-MS), Brasília, Distrito Federal, Brazil., de Fátima Rangel Fernandes C; Departamento de Imunização e Doenças Transmissíveisa/Secretaria de Vigilancia em Saude, Ministerio da Saude, Brasılia, Distrito Federal, Brazil., Navegantes W; Pan American Health Organization (PAHO)/World Health Organization (WHO), Brasilia, Distrito Federal, Brazil., do Carmo Said RF; Pan American Health Organization (PAHO)/World Health Organization (WHO), Brasilia, Distrito Federal, Brazil., Campelo de A E Melo CF; Pan American Health Organization (PAHO)/World Health Organization (WHO), Brasilia, Distrito Federal, Brazil., Almiron M; Pan American Health Organization (PAHO)/World Health Organization (WHO), Brasilia, Distrito Federal, Brazil., Lourenço J; Department of Zoology, University of Oxford, Oxford, UK.; Biosystems and Integrative Sciences Institute, Universidade de Lisboa, Lisboa, Portugal., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Laboratório Central de Saúde Pública do Estado de Minas Gerais (LACEN-MG), Fundação Ezequiel Dias, Belo Horizonte, Minas Gerais, Brazil.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Department of Global Health, University of Washington, Seattle, WA, USA., Holmes EC; Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences and School of Medical Sciences, University of Sydney, Sydney, New South Wales, Australia., Haddad R; Butantan Institute, São Paulo, Brazil., Sampaio SC; Butantan Institute, São Paulo, Brazil. aroli.coccuzzo@butantan.gov.br., Elias MC; Butantan Institute, São Paulo, Brazil. arolina.eliassabbaga@butantan.gov.br., Kashima S; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil. skashima@hemocentro.fmrp.usp.br., Junior de Alcantara LC; Laboratório de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil. luiz.alcantara@ioc.fiocruz.br.; Laboratório de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Belo Horizonte, Minas Gerais, Brazil. luiz.alcantara@ioc.fiocruz.br., Covas DT; Blood Center of Ribeirão Preto, Ribeirão Preto Medical School, University of São Paulo, Ribeirão Preto, São Paulo, Brazil. dimas.covas@butantan.gov.br.; Butantan Institute, São Paulo, Brazil. dimas.covas@butantan.gov.br.

المصدر: Nature microbiology [Nat Microbiol] 2022 Sep; Vol. 7 (9), pp. 1490-1500. Date of Electronic Publication: 2022 Aug 18.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101674869 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2058-5276 (Electronic) Linking ISSN: 20585276 NLM ISO Abbreviation: Nat Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: COVID-19* , SARS-CoV-2*, Brazil ; Genomics ; Humans

SCR Organism: SARS-CoV-2 variants

المؤلفون: Bbosa N, Ssemwanga D, Namagembe H, Kiiza R, Kiconco J, Kayiwa J, Lutalo T, Lutwama J, Ssekagiri A, Ssewanyana I, Nabadda S, Kyobe-Bbosa H, Giandhari J, Pillay S, Ramphal U, Ramphal Y, Naidoo Y, Tshiabuila D, Tegally H, San EJ, Wilkinson E, de Oliveira T, Kaleebu P

المصدر: Emerging infectious diseases [Emerg Infect Dis] 2022 May; Vol. 28 (5), pp. 1021-1025. Date of Electronic Publication: 2022 Mar 23.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: National Center for Infectious Diseases, Centers for Disease Control and Prevention (CDC) Country of Publication: United States NLM ID: 9508155 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1080-6059 (Electronic) Linking ISSN: 10806040 NLM ISO Abbreviation: Emerg Infect Dis Subsets: MEDLINE

مواضيع طبية MeSH: COVID-19*/epidemiology , SARS-CoV-2*/genetics, Humans ; Pandemics ; Uganda/epidemiology

SCR Organism: SARS-CoV-2 variants

المؤلفون: Tshiabuila D; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa. derektshiabuila@gmail.com.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa. derektshiabuila@gmail.com., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Ramphal U; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., Ramphal Y; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Maharaj A; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Anyaneji UJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Naidoo Y; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., Lessells RJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal Durban 4001, KwaZulu-Natal, South Africa.; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, Stellenbosch, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Department of Global Health, University of Washington, Seattle, WA, USA.

المصدر: BMC genomics [BMC Genomics] 2022 Apr 22; Vol. 23 (1), pp. 319. Date of Electronic Publication: 2022 Apr 22.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

مواضيع طبية MeSH: COVID-19* , SARS-CoV-2*/genetics, Genome, Viral ; High-Throughput Nucleotide Sequencing/methods ; Humans ; Whole Genome Sequencing/methods

المؤلفون: Giovanetti M, Fonseca V; Laboratorio de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627 - Pampulha, Belo Horizonte, Minas Gerais 31270-901, Brazil., Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, 238 Mazisi Kunene Rd, Glenwood, Durban 4041, South Africa., Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, 238 Mazisi Kunene Rd, Glenwood, Durban 4041, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, 238 Mazisi Kunene Rd, Glenwood, Durban 4041, South Africa., Althaus CL; Institute of Social and Preventive Medicine, University of Bern, Hochschulstrasse 6, Bern 3012, Switzerland., Xavier J; Laboratorio de Genética Celular e Molecular, Instituto de Ciências Biologicas, Universidade Federal de Minas Gerais, Av. Pres. Antônio Carlos, 6627 - Pampulha, Belo Horizonte, Minas Gerais 31270-901, Brazil., Nanev Slavov S; Ribeirão Preto Medical School, Blood Center of Ribeirão Preto, University of São Paulo, R. Quintino Bocaiuva, nº 470 - Centro, Ribeirão Preto, SP 14015-160, Brazil., Viala VL; Butantan Institute, Avenida Doutor Vital Brasil, 1500 - Butantã, Sao Paulo - SP, Brazil., Ranieri Jerônimo Lima A; Butantan Institute, Avenida Doutor Vital Brasil, 1500 - Butantã, Sao Paulo - SP, Brazil., Ribeiro G; Butantan Institute, Avenida Doutor Vital Brasil, 1500 - Butantã, Sao Paulo - SP, Brazil., Souza-Neto JA; School of Agricultural Sciences, São Paulo State University (UNESP), R. Quintino Bocaiuva, nº 470, Botucatu 05508-900, Brazil., Fukumasu H; Department of Veterinary Medicine, School of Animal Science and Food Engineering, University of Sao Paulo, Pirassununga, R. Quintino Bocaiuva, nº 470, Sao Paulo, Brazil., Lehmann Coutinho L; Centro de Genômica Funcional da ESALQ, University of São Paulo, R. Quintino Bocaiuva, nº 470, Piracicaba, SP, Brazil., Venancio da Cunha R; Bio-Manguinhos, Fundação Oswaldo Cruz, Rio de Janeiro, Av. Brasil, 4365, Rio de Janeiro 21040-360, Brazil., Freitas C; Coordenacão Geral dos Laboratórios de Saúde Publica/Secretaria de Vigilância em Saúde, Ministério da Saúde (CGLAB/SVS-MS), Esplanada dos Ministérios - Bloco G - Edifício Sede - CEP, Brasília, Distrito Federal 70058-900, Brazil., Campelo de A E Melo CF; Organização Pan-Americana da Saúde/Organização Mundial da Saúde, Lote 19 - Avenida das Nações, SEN - Asa Norte, Brasília, Distrito Federal 70312-970, Brazil., Navegantes de Araújo W; Organização Pan-Americana da Saúde/Organização Mundial da Saúde, Lote 19 - Avenida das Nações, SEN - Asa Norte, Brasília, Distrito Federal 70312-970, Brazil., Do Carmo Said RF; Organização Pan-Americana da Saúde/Organização Mundial da Saúde, Lote 19 - Avenida das Nações, SEN - Asa Norte, Brasília, Distrito Federal 70312-970, Brazil., Almiron M; Organização Pan-Americana da Saúde/Organização Mundial da Saúde, Lote 19 - Avenida das Nações, SEN - Asa Norte, Brasília, Distrito Federal 70312-970, Brazil., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, College of Health Sciences, University of KwaZulu-Natal, 238 Mazisi Kunene Rd, Glenwood, Durban 4041, South Africa., Coccuzzo Sampaio S; Butantan Institute, Avenida Doutor Vital Brasil, 1500 - Butantã, Sao Paulo - SP, Brazil., Elias MC; Department of Zoology, Peter Medawar Building, University of Oxford, 1a Mansfield Rd, Oxford OX1 3SZ, UK., Covas DT; Ribeirão Preto Medical School, Blood Center of Ribeirão Preto, University of São Paulo, R. Quintino Bocaiuva, nº 470 - Centro, Ribeirão Preto, SP 14015-160, Brazil., Holmes EC; Sydney Institute for Infectious Diseases, School of Life and Environmental Sciences and School of Medical Sciences, University of Sydney, Sydney, NSW, Australia., Lourenço J; Department of Zoology, Peter Medawar Building, University of Oxford, 1a Mansfield Rd, Oxford OX1 3SZ, UK., Kashima S; Ribeirão Preto Medical School, Blood Center of Ribeirão Preto, University of São Paulo, R. Quintino Bocaiuva, nº 470 - Centro, Ribeirão Preto, SP 14015-160, Brazil., de Alcantara LCJ; Laboratorio de Flavivirus, Fundação Oswaldo Cruz, Rio de Janeiro, Instituto Oswaldo Cruz /IOC /FIOCRUZ - Av. Brasil, 4365, Rio de Janeiro, Rio de Janeiro 21040-360, Brazil.

المصدر: Virus evolution [Virus Evol] 2022 Mar 18; Vol. 8 (1), pp. veac024. Date of Electronic Publication: 2022 Mar 18 (Print Publication: 2022).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 101664675 Publication Model: eCollection Cited Medium: Print ISSN: 2057-1577 (Print) Linking ISSN: 20571577 NLM ISO Abbreviation: Virus Evol Subsets: PubMed not MEDLINE

المؤلفون: Singh L; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa. singhl@ukzn.ac.za., Anyaneji UJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Ndifon W; African Institute for Mathematical Sciences, The Next Einstein Initiative, Kigali, Rwanda. wndifon@nexteinstein.org., Turok N; Higgs Centre for Theoretical Physics, School of Physics and Astronomy, University of Edinburgh, Edinburgh, UK., Mattison SA; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Sinayskiy I; School of Chemistry and Physics, University of Kwa-Zulu Natal, Westville, South Africa.; National Institute for Theoretical and Computational Sciences (NITheCS), KwaZulu-Natal, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Barnett S; Discipline of Electrical, Electronic and Computer Engineering, University of KwaZulu-Natal, Durban, South Africa., Lorimer T; Discipline of Electrical, Electronic and Computer Engineering, University of KwaZulu-Natal, Durban, South Africa., Petruccione F; School of Chemistry and Physics, University of Kwa-Zulu Natal, Westville, South Africa.; National Institute for Theoretical and Computational Sciences (NITheCS), KwaZulu-Natal, South Africa., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine & Medical Sciences, University of KwaZulu-Natal, Durban, South Africa. tuliodna@gmail.com.

المصدر: Scientific reports [Sci Rep] 2021 Sep 07; Vol. 11 (1), pp. 17793. Date of Electronic Publication: 2021 Sep 07.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

مواضيع طبية MeSH: COVID-19/*diagnosis , COVID-19 Nucleic Acid Testing/*methods , High-Throughput Screening Assays/*methods , SARS-CoV-2/*isolation & purification , Specimen Handling/*methods, Antigens, Viral/isolation & purification ; Athletes ; COVID-19/blood ; COVID-19/virology ; COVID-19 Nucleic Acid Testing/economics ; COVID-19 Serological Testing/economics ; COVID-19 Serological Testing/methods ; Cost Savings ; High-Throughput Screening Assays/economics ; Humans ; RNA, Viral/isolation & purification ; SARS-CoV-2/genetics ; SARS-CoV-2/immunology ; Sensitivity and Specificity ; South Africa ; Specimen Handling/economics ; Sports Medicine/economics ; Sports Medicine/methods

المؤلفون: Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Giovanetti M; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil., Iranzadeh A; Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa., Fonseca V; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Doolabh D; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Msomi N; Discipline of Virology, School of Laboratory Medicine and Medical Sciences and National Health Laboratory Service (NHLS), University of KwaZulu-Natal, Durban, South Africa., Mlisana K; NHLS, Johannesburg, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., von Gottberg A; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa., Walaza S; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa., Allam M; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa., Ismail A; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa., Mohale T; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa., Glass AJ; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.; Department of Molecular Pathology, Lancet Laboratories, Johannesburg, South Africa., Engelbrecht S; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa., Van Zyl G; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa., Preiser W; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University and NHLS Tygerberg Hospital, Cape Town, South Africa., Petruccione F; Centre for Quantum Technology, University of KwaZulu-Natal, Durban, South Africa.; National Institute for Theoretical Physics (NITheP), University of KwaZulu-Natal, Durban, South Africa., Sigal A; Africa Health Research Institute, Durban, South Africa.; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Max Planck Institute for Infection Biology, Berlin, Germany., Hardie D; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Marais G; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Hsiao NY; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Korsman S; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Davies MA; Centre for Infectious Disease Epidemiology and Research, University of Cape Town, Cape Town, South Africa.; Western Cape Government: Health, Cape Town, South Africa., Tyers L; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Mudau I; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., York D; Molecular Diagnostics Services, Durban, South Africa., Maslo C; Department of Quality Leadership, Netcare Hospitals, Johannesburg, South Africa., Goedhals D; Division of Virology, NHLS Universitas Academic Laboratories, University of The Free State, Bloemfontein, South Africa., Abrahams S; NHLS, Port Elizabeth, South Africa., Laguda-Akingba O; NHLS, Port Elizabeth, South Africa.; Department of Laboratory Medicine and Pathology, Faculty of Health Sciences, Walter Sisulu University, Mthatha, South Africa., Alisoltani-Dehkordi A; Division of Medical Virology, Department of Pathology, University of Cape Town, Cape Town, South Africa.; Division of Biomedical Sciences, University of California Riverside School of Medicine, Riverside, CA, USA., Godzik A; Division of Biomedical Sciences, University of California Riverside School of Medicine, Riverside, CA, USA., Wibmer CK; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa., Sewell BT; Structural Biology Research Unit, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa., Lourenço J; Department of Zoology, University of Oxford, Oxford, UK., Alcantara LCJ; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratório de Genética Celular e Molecular, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil., Kosakovsky Pond SL; Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA., Weaver S; Institute for Genomics and Evolutionary Medicine, Temple University, Philadelphia, PA, USA., Martin D; Computational Biology Division, Department of Integrative Biomedical Sciences, University of Cape Town, Cape Town, South Africa.; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Lessells RJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., Bhiman JN; National Institute for Communicable Diseases, NHLS, Johannesburg, South Africa.; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa., Williamson C; Division of Medical Virology, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Division of Medical Virology, NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa. tuliodna@gmail.com.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa. tuliodna@gmail.com.; Department of Global Health, University of Washington, Seattle, WA, USA. tuliodna@gmail.com.

المصدر: Nature [Nature] 2021 Apr; Vol. 592 (7854), pp. 438-443. Date of Electronic Publication: 2021 Mar 09.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

مواضيع طبية MeSH: Mutation* , Phylogeny* , Phylogeography*, COVID-19/*virology , SARS-CoV-2/*genetics , SARS-CoV-2/*isolation & purification, COVID-19/epidemiology ; COVID-19/immunology ; COVID-19/transmission ; DNA Mutational Analysis ; Evolution, Molecular ; Genetic Fitness ; Humans ; Immune Evasion ; Models, Molecular ; SARS-CoV-2/immunology ; SARS-CoV-2/pathogenicity ; Selection, Genetic ; South Africa/epidemiology ; Spike Glycoprotein, Coronavirus/chemistry ; Spike Glycoprotein, Coronavirus/genetics ; Spike Glycoprotein, Coronavirus/metabolism ; Time Factors

المؤلفون: Tegally H; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Wilkinson E; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Lessells RJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Msomi N; Discipline of Virology, University of KwaZulu-Natal, Durban, South Africa., Mlisana K; National Health Laboratory Service, Springbok, South Africa., Bhiman JN; National Institute For Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., von Gottberg A; National Institute For Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa., Walaza S; National Institute For Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa., Fonseca V; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Allam M; National Institute For Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., Ismail A; National Institute For Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., Glass AJ; School of Pathology, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.; Department of Molecular Pathology, Lancet Laboratories, Johannesburg, South Africa., Engelbrecht S; Division of Medical Virology at NHLS Tygerberg Hospital, Stellenbosch University, Stellenbosch, South Africa., Van Zyl G; Division of Medical Virology at NHLS Tygerberg Hospital, Stellenbosch University, Stellenbosch, South Africa., Preiser W; Division of Medical Virology at NHLS Tygerberg Hospital, Stellenbosch University, Stellenbosch, South Africa., Williamson C; Division of Medical Virology at NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Petruccione F; Centre for Quantum Technology, University of KwaZulu-Natal, Durban, South Africa.; National Institute for Theoretical Physics (NITheP), KwaZulu-Natal, South Africa., Sigal A; Africa Health Research Institute, Durban, South Africa.; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.; Max Planck Institute for Infection Biology, Berlin, Germany., Gazy I; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Hardie D; Division of Medical Virology at NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Hsiao NY; Division of Medical Virology at NHLS Groote Schuur Hospital, University of Cape Town, Cape Town, South Africa., Martin D; Division of Computational Biology, Department of Integrative Biomedical Sciences, Institute of Infectious Diseases and Molecular medicine, The University of Cape Town, Cape Town, South Africa., York D; Molecular Diagnostics Services, Durban, South Africa., Goedhals D; Division of Virology at NHLS Universitas Academic Laboratories, University of The Free State, Bloemfontein, South Africa., San EJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Giovanetti M; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil., Lourenço J; Department of Zoology, University of Oxford, Oxford, UK., Alcantara LCJ; Laboratorio de Flavivirus, Fundacao Oswaldo Cruz, Rio de Janeiro, Brazil.; Laboratorio de Genetica Celular e Molecular, ICB, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil., de Oliveira T; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa. deoliveira@ukzn.ac.za.; Department of Global Health, University of Washington, Seattle, WA, USA. deoliveira@ukzn.ac.za.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa. deoliveira@ukzn.ac.za.

المصدر: Nature medicine [Nat Med] 2021 Mar; Vol. 27 (3), pp. 440-446. Date of Electronic Publication: 2021 Feb 02.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Company Country of Publication: United States NLM ID: 9502015 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-170X (Electronic) Linking ISSN: 10788956 NLM ISO Abbreviation: Nat Med Subsets: MEDLINE

مواضيع طبية MeSH: COVID-19/*epidemiology , COVID-19/*virology , SARS-CoV-2/*genetics, Datasets as Topic ; Genome, Viral ; Humans ; Molecular Typing ; Mutation ; Pandemics ; Phylogeny ; Phylogeography ; Real-Time Polymerase Chain Reaction ; SARS-CoV-2/classification ; SARS-CoV-2/isolation & purification ; Sequence Analysis, RNA ; South Africa/epidemiology ; Whole Genome Sequencing