المؤلفون: Kundert, K, Lucas, JE, Watters, KE, Fellmann, C, Ng, AH, Heineike, BM, Fitzsimmons, CM, Oakes, BL, Qu, J, Prasad, N, Rosenberg, OS, Savage, DF, El-Samad, H, Doudna, JA, Kortemme, T

المصدر: Nature communications. 10(1)

مصطلحات موضوعية: DNA, RNA, Guide, Ligands, Aptamers, Nucleotide, CRISPR-Cas Systems, Gene Editing, CRISPR-Associated Protein 9, Biochemistry and Cell Biology, Physical Sciences, Biological Sciences, Biotechnology, Genetics, Generic health relevance, RNA, Guide, Kinetoplastida

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/3t52t2n5

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المؤلفون: Turnsek JB; Department of Molecular and Cell Biology, University of California, Berkeley, California, USA., Oltrogge LM; Department of Molecular and Cell Biology, University of California, Berkeley, California, USA; Howard Hughes Medical Institute, University of California, Berkeley, California, USA., Savage DF; Department of Molecular and Cell Biology, University of California, Berkeley, California, USA; Howard Hughes Medical Institute, University of California, Berkeley, California, USA; Innovative Genomics Institute, University of California, Berkeley, California, USA. Electronic address: savage@berkeley.edu.

المصدر: The Journal of biological chemistry [J Biol Chem] 2024 Jul 04, pp. 107532. Date of Electronic Publication: 2024 Jul 04.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

المؤلفون: Soni C; Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467, United States., Prywes N; Innovative Genomics Institute, University of California, Berkeley, California 94720, United States.; Howard Hughes Medical Institute, University of California, Berkeley, California 94720, United States., Hall M; Department of Biology, Boston College, Chestnut Hill, Massachusetts 02467, United States., Nair MA; Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467, United States., Savage DF; Innovative Genomics Institute, University of California, Berkeley, California 94720, United States.; Howard Hughes Medical Institute, University of California, Berkeley, California 94720, United States.; Department of Molecular and Cellular Biology, University of California, Berkeley, California 94720 United States., Schepartz A; Department of Molecular and Cellular Biology, University of California, Berkeley, California 94720 United States.; Department of Chemistry, University of California, Berkeley, California 94720, United States.; California Institute for Quantitative Biosciences, University of California, Berkeley, California 94720, United States.; Chan Zuckerberg Biohub, San Francisco, California 94158, United States.; ARC Institute, Palo Alto, California 94304, United States., Chatterjee A; Department of Chemistry, Boston College, Chestnut Hill, Massachusetts 02467, United States.

المصدر: ACS central science [ACS Cent Sci] 2024 May 20; Vol. 10 (6), pp. 1211-1220. Date of Electronic Publication: 2024 May 20 (Print Publication: 2024).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: ACS Publications Country of Publication: United States NLM ID: 101660035 Publication Model: eCollection Cited Medium: Print ISSN: 2374-7943 (Print) Linking ISSN: 23747943 NLM ISO Abbreviation: ACS Cent Sci Subsets: PubMed not MEDLINE

المؤلفون: Prywes N; Innovative Genomics Institute, University of California; Berkeley, California 94720, USA.; Howard Hughes Medical Institute, University of California; Berkeley, California 94720, USA., Philips NR; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA., Oltrogge LM; Howard Hughes Medical Institute, University of California; Berkeley, California 94720, USA.; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA., Lindner S; University of Heidelberg; 69047 Heidelberg, Germany., Candace Tsai YC; School of Biological Sciences, Nanyang Technological University; Singapore 637551, Singapore., de Pins B; Department of Plant and Environmental Sciences, Weizmann Institute of Science; Rehovot 76100, Israel., Cowan AE; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA.; Joint BioEnergy Institute, Lawrence Berkeley National Laboratory; Emeryville, CA 94608, USA., Taylor-Kearney LJ; Department of Plant and Microbial Biology, University of California, Berkeley; Berkeley, CA 94720, USA., Chang HA; Department of Plant and Microbial Biology, University of California, Berkeley; Berkeley, CA 94720, USA., Hall LN; Biophysics, University of California, Berkeley; Berkeley, CA 94720, USA., Bellieny-Rabelo D; Innovative Genomics Institute, University of California; Berkeley, California 94720, USA.; California Institute for Quantitative Biosciences (QB3), University of California; Berkeley, CA 94720, USA., Nisonoff HM; Center for Computational Biology, University of California, Berkeley; Berkeley, CA, USA., Weissman RF; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA., Flamholz AI; Division of Biology and Biological Engineering, California Institute of Technology; Pasadena, CA 91125., Ding D; Innovative Genomics Institute, University of California; Berkeley, California 94720, USA.; Howard Hughes Medical Institute, University of California; Berkeley, California 94720, USA., Bhatt AY; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA.; School of Medicine, University of California, San Diego; La Jolla, CA 92092, USA., Shih PM; Innovative Genomics Institute, University of California; Berkeley, California 94720, USA.; Department of Plant and Microbial Biology, University of California, Berkeley; Berkeley, CA 94720, USA.; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory; Berkeley, CA 94720, USA.; Feedstocks Division, Joint BioEnergy Institute; Emeryville, CA 94608, USA., Mueller-Cajar O; School of Biological Sciences, Nanyang Technological University; Singapore 637551, Singapore., Milo R; Department of Plant and Environmental Sciences, Weizmann Institute of Science; Rehovot 76100, Israel., Savage DF; Innovative Genomics Institute, University of California; Berkeley, California 94720, USA.; Howard Hughes Medical Institute, University of California; Berkeley, California 94720, USA.; Department of Molecular and Cell Biology, University of California; Berkeley, California 94720, USA.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Apr 11. Date of Electronic Publication: 2024 Apr 11.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Ding D; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA. davidding@berkeley.edu., Shaw AY; Department of Systems Biology, Harvard Medical School, Boston, MA, 02115, USA., Sinai S; Dyno Therapeutics, Watertown, MA, 02472, USA., Rollins N; Seismic Therapeutics, Lab Central, Cambridge, MA, 02142, USA., Prywes N; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA., Savage DF; Innovative Genomics Institute, University of California, Berkeley, CA, 94720, USA.; Department of Molecular and Cell Biology, University of California, Berkeley, CA, 94720, USA.; Howard Hughes Medical Institute, University of California, Berkeley, CA, 94720, USA., Laub MT; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.; Howard Hughes Medical Institute, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA., Marks DS; Department of Systems Biology, Harvard Medical School, Boston, MA, 02115, USA. debbie@hms.harvard.edu.

المصدر: Nature communications [Nat Commun] 2024 Feb 22; Vol. 15 (1), pp. 1639. Date of Electronic Publication: 2024 Feb 22.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/metabolism , Neural Networks, Computer*, Amino Acids/chemistry ; Mutation

المؤلفون: Valentin-Alvarado LE; Graduate Group in Microbiology, University of California, Berkeley, CA, USA.; Innovative Genomics Institute, University of California, Berkeley, CA, USA., Fakra SC; Advanced Light Source, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Probst AJ; Earth and Planetary Science, University of California, Berkeley, CA, USA.; Environmental Metagenomics, Research Center One Health Ruhr of the University Alliance Ruhr, Faculty of Chemistry,, University of Duisburg-Essen, Essen, Essen, Germany., Giska JR; Earth and Planetary Science, University of California, Berkeley, CA, USA.; Cleaner Air Oregon Program, Oregon Department of Environmental Quality, Portland, USA., Jaffe AL; Graduate Group in Microbiology, University of California, Berkeley, CA, USA., Oltrogge LM; Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.; Howard Hughes Medical Institute, University of California, Berkeley, CA, 94720, USA., West-Roberts J; Environmental Science, Policy and Management, University of California, Berkeley, CA, USA., Rowland J; Earth and Planetary Science, University of California, Berkeley, CA, USA.; Earth and Env. Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, USA., Manga M; Earth and Planetary Science, University of California, Berkeley, CA, USA.; University of Duisburg-Essen, Universitätsstraße 5, 45141, Essen, Germany., Savage DF; Innovative Genomics Institute, University of California, Berkeley, CA, USA.; Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA.; Howard Hughes Medical Institute, University of California, Berkeley, CA, 94720, USA., Greening C; Department of Microbiology, Biomedicine Discovery Institute, Monash University, Clayton, Australia., Baker BJ; Department of Integrative Biology, University of Texas, Austin, USA.; Department of Marine Science, University of Texas, Austin, USA., Banfield JF; Innovative Genomics Institute, University of California, Berkeley, CA, USA. jbanfield@berkeley.edu.; Earth and Planetary Science, University of California, Berkeley, CA, USA. jbanfield@berkeley.edu.; Environmental Science, Policy and Management, University of California, Berkeley, CA, USA. jbanfield@berkeley.edu.; Department of Marine Science, University of Texas, Austin, USA. jbanfield@berkeley.edu.; Energy Geoscience Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. jbanfield@berkeley.edu.

المصدر: Microbiome [Microbiome] 2024 Jan 26; Vol. 12 (1), pp. 15. Date of Electronic Publication: 2024 Jan 26.

نوع المنشور: Video-Audio Media; Journal Article

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE

مواضيع طبية MeSH: Ecosystem* , Groundwater*/microbiology, Bacteria/genetics ; Bacteria/metabolism ; Sulfides/metabolism ; Oxidation-Reduction ; Sulfur/metabolism ; Biofilms ; Hydrogen/metabolism ; Phylogeny