المؤلفون: Lim HG; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA; Joint BioEnergy Institute, 5885 Hollis Street, 4th Floor, Emeryville, CA, 94608, USA., Rychel K; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA., Sastry AV; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA., Bentley GJ; Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO, 80401, USA; Agile BioFoundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd, Emeryville, CA, 94720, USA., Mueller J; Department of Chemical & Biomolecular Engineering, University of Nebraska-Lincoln, 1400 R St, Lincoln, NE, 68588, USA., Schindel HS; Biosciences Division, Oak Ridge National Laboratory, 5200 Bethel Valley Rd, Oak Ridge, TN, 37830, USA., Larsen PE; Biosciences Division, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, IL, 60539, USA., Laible PD; Biosciences Division, Argonne National Laboratory, 9700 South Cass Avenue, Lemont, IL, 60539, USA., Guss AM; Agile BioFoundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd, Emeryville, CA, 94720, USA; Biosciences Division, Oak Ridge National Laboratory, 5200 Bethel Valley Rd, Oak Ridge, TN, 37830, USA., Niu W; Department of Chemical & Biomolecular Engineering, University of Nebraska-Lincoln, 1400 R St, Lincoln, NE, 68588, USA., Johnson CW; Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO, 80401, USA; Agile BioFoundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd, Emeryville, CA, 94720, USA., Beckham GT; Renewable Resources and Enabling Sciences Center, National Renewable Energy Laboratory, 15013 Denver West Parkway, Golden, CO, 80401, USA; Agile BioFoundry, Lawrence Berkeley National Laboratory, 1 Cyclotron Rd, Emeryville, CA, 94720, USA., Feist AM; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA; Joint BioEnergy Institute, 5885 Hollis Street, 4th Floor, Emeryville, CA, 94608, USA; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2800, Kgs, Lyngby, Denmark., Palsson BO; Department of Bioengineering, University of California San Diego, 9500 Gilman Dr., La Jolla, CA, 92093, USA; Joint BioEnergy Institute, 5885 Hollis Street, 4th Floor, Emeryville, CA, 94608, USA; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, 2800, Kgs, Lyngby, Denmark; Department of Pediatrics, University of California, San Diego, CA, 92093, USA. Electronic address: palsson@ucsd.edu.

المصدر: Metabolic engineering [Metab Eng] 2022 Jul; Vol. 72, pp. 297-310. Date of Electronic Publication: 2022 Apr 27.

نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Academic Press Country of Publication: Belgium NLM ID: 9815657 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-7184 (Electronic) Linking ISSN: 10967176 NLM ISO Abbreviation: Metab Eng Subsets: MEDLINE

مواضيع طبية MeSH: Pseudomonas putida*/genetics , Pseudomonas putida*/metabolism, Gene Expression Regulation, Bacterial ; Gene Regulatory Networks ; Machine Learning ; Transcription Factors/genetics ; Transcription Factors/metabolism ; Transcriptome

المؤلفون: Bentley GJ; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Narayanan N; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Jha RK; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Salvachúa D; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Elmore JR; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Peabody GL; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Black BA; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Ramirez K; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., De Capite A; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Michener WE; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Werner AZ; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Klingeman DM; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Schindel HS; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Nelson R; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Foust L; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Guss AM; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Dale T; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Johnson CW; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. Electronic address: christopher.johnson@nrel.gov., Beckham GT; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. Electronic address: gregg.beckham@nrel.gov.

المصدر: Metabolic engineering [Metab Eng] 2022 Jul; Vol. 72, pp. 66-67. Date of Electronic Publication: 2022 Mar 01.

نوع المنشور: Journal Article; Published Erratum

بيانات الدورية: Publisher: Academic Press Country of Publication: Belgium NLM ID: 9815657 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-7184 (Electronic) Linking ISSN: 10967176 NLM ISO Abbreviation: Metab Eng Subsets: PubMed not MEDLINE; MEDLINE

المؤلفون: Bentley GJ; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Narayanan N; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Jha RK; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Salvachúa D; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Elmore JR; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA; Current Address: Biosciences Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA., Peabody GL; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Black BA; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Ramirez K; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., De Capite A; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Michener WE; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Werner AZ; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Klingeman DM; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Schindel HS; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Nelson R; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Foust L; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA., Guss AM; Biosciences Division, Oak Ridge National Laboratory, Oak Ridge, TN, 37831, USA., Dale T; Bioscience Division, MS M888, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA., Johnson CW; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. Electronic address: christopher.johnson@nrel.gov., Beckham GT; National Bioenergy Center, National Renewable Energy Laboratory, Golden, CO, 80401, USA. Electronic address: gregg.beckham@nrel.gov.

المصدر: Metabolic engineering [Metab Eng] 2020 May; Vol. 59, pp. 64-75. Date of Electronic Publication: 2020 Jan 10.

نوع المنشور: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Academic Press Country of Publication: Belgium NLM ID: 9815657 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1096-7184 (Electronic) Linking ISSN: 10967176 NLM ISO Abbreviation: Metab Eng Subsets: MEDLINE

مواضيع طبية MeSH: Metabolic Engineering* , Pseudomonas putida*/genetics , Pseudomonas putida*/metabolism, Glucose/*metabolism , Sorbic Acid/*analogs & derivatives, Sorbic Acid/metabolism

المؤلفون: Schindel HS; Department of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA., Karty JA; Department of Chemistry, Indiana University, Bloomington, Indiana, USA., McKinlay JB; Department of Biology, Indiana University, Bloomington, Indiana, USA., Bauer CE; Department of Molecular and Cellular Biochemistry, Indiana University, Bloomington, Indiana, USA bauer@indiana.edu.

المصدر: Journal of bacteriology [J Bacteriol] 2019 Feb 11; Vol. 201 (5). Date of Electronic Publication: 2019 Feb 11 (Print Publication: 2019).

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 2985120R Publication Model: Electronic-Print Cited Medium: Internet ISSN: 1098-5530 (Electronic) Linking ISSN: 00219193 NLM ISO Abbreviation: J Bacteriol Subsets: MEDLINE

مواضيع طبية MeSH: Bacterial Proteins/*metabolism , Metabolic Networks and Pathways/*genetics , Propylene Glycol/*metabolism , Rhodobacter capsulatus/*enzymology , Rhodobacter capsulatus/*metabolism, 1-Propanol/metabolism ; Aldehydes/metabolism ; Anaerobiosis ; Bacterial Proteins/genetics ; Biotransformation ; Chromatography, High Pressure Liquid ; Computational Biology ; Darkness ; Mass Spectrometry ; Multigene Family ; Propionates/metabolism ; Rhodobacter capsulatus/genetics

المؤلفون: Schindel HS; Department of Food Science, University of Tennessee, 2600 River Dr., Knoxville, TN, 37996-4561, USA., Piatek AA; Department of Plant Sciences, University of Tennessee, 2431 Joe Johnson Dr., Knoxville, TN, 37996-4561, USA., Stewart CN Jr; Department of Plant Sciences, University of Tennessee, 2431 Joe Johnson Dr., Knoxville, TN, 37996-4561, USA. nealstewart@utk.edu.; Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, 37996, USA. nealstewart@utk.edu., Lenaghan SC; Department of Food Science, University of Tennessee, 2600 River Dr., Knoxville, TN, 37996-4561, USA. slenagha@utk.edu.; Center for Agricultural Synthetic Biology, University of Tennessee Institute of Agriculture, Knoxville, TN, 37996, USA. slenagha@utk.edu.; Department of Mechanical, Aerospace, and Biomedical Engineering, University of Tennessee, Knoxville, TN, 37996, USA. slenagha@utk.edu.

المصدر: Plant cell reports [Plant Cell Rep] 2018 Oct; Vol. 37 (10), pp. 1419-1429. Date of Electronic Publication: 2018 Jul 23.

نوع المنشور: Journal Article; Review

بيانات الدورية: Publisher: Springer Country of Publication: Germany NLM ID: 9880970 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-203X (Electronic) Linking ISSN: 07217714 NLM ISO Abbreviation: Plant Cell Rep Subsets: MEDLINE

مواضيع طبية MeSH: Genome, Plastid*, Metabolic Engineering/*methods , Synthetic Biology/*methods, 3' Untranslated Regions ; 5' Untranslated Regions ; Gene Expression Regulation ; Genome, Plant ; Promoter Regions, Genetic ; Transgenes

المؤلفون: Schindel HS; Biochemistry, Indiana University Bloomington, Simon Hall MSB, 212 S. Hawthorne Dr., Bloomington, IN 47405-7003, USA., Bauer CE; Biochemistry, Indiana University Bloomington, Simon Hall MSB, 212 S. Hawthorne Dr., Bloomington, IN 47405-7003, USA.

المصدر: Microbial genomics [Microb Genom] 2016 Oct 21; Vol. 2 (10), pp. e000081. Date of Electronic Publication: 2016 Oct 21 (Print Publication: 2016).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: eCollection Cited Medium: Print ISSN: 2057-5858 (Print) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE

مواضيع طبية MeSH: Gene Expression Regulation, Bacterial/*genetics , Regulon/*genetics , Rhodobacter/*genetics, Bacterial Proteins/genetics ; Rhodobacter capsulatus ; Rhodobacter sphaeroides ; Species Specificity