المؤلفون: Shao XM; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland., Bhattacharya R; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland., Huang J; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland., Sivakumar IKA; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Computer Science, Johns Hopkins University, Baltimore, Maryland.; Applied Physics Laboratory, Johns Hopkins University, Laurel, Maryland., Tokheim C; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland., Zheng L; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland., Hirsch D; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland., Kaminow B; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, Maryland., Omdahl A; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland., Bonsack M; Immunotherapy and Immunoprevention, German Cancer Research Center (DKFZ), Heidelberg, Germany.; Molecular Vaccine Design, German Center for Infection Research (DZIF), partner site Heidelberg, Heidelberg, Germany.; Faculty of Biosciences, Heidelberg University, Heidelberg, Germany., Riemer AB; Immunotherapy and Immunoprevention, German Cancer Research Center (DKFZ), Heidelberg, Germany.; Molecular Vaccine Design, German Center for Infection Research (DZIF), partner site Heidelberg, Heidelberg, Germany., Velculescu VE; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; McKusick-Nathans Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Anagnostou V; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Pagel KA; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland., Karchin R; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland. karchin@jhu.edu.; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland.; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.

المصدر: Cancer immunology research [Cancer Immunol Res] 2020 Mar; Vol. 8 (3), pp. 396-408. Date of Electronic Publication: 2019 Dec 23.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: American Association for Cancer Research Country of Publication: United States NLM ID: 101614637 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2326-6074 (Electronic) Linking ISSN: 23266066 NLM ISO Abbreviation: Cancer Immunol Res Subsets: MEDLINE

مواضيع طبية MeSH: Neural Networks, Computer*, Antigens, Neoplasm/*immunology , Cancer Vaccines/*immunology , Histocompatibility Antigens Class I/*immunology , Histocompatibility Antigens Class II/*immunology , Neoplasms/*immunology, Algorithms ; Antigens, Neoplasm/genetics ; Antigens, Neoplasm/metabolism ; Artificial Intelligence ; CD8-Positive T-Lymphocytes/immunology ; Cancer Vaccines/therapeutic use ; Computational Biology/methods ; Data Mining ; Histocompatibility Antigens Class I/genetics ; Histocompatibility Antigens Class I/metabolism ; Histocompatibility Antigens Class II/genetics ; Histocompatibility Antigens Class II/metabolism ; Humans ; Mutation, Missense ; Neoplasms/drug therapy ; Neoplasms/metabolism ; Neoplasms/pathology ; Predictive Value of Tests ; Protein Binding ; Software

المؤلفون: Thorsson V; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: vesteinn.thorsson@systemsbiology.org., Gibbs DL; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Brown SD; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Wolf D; University of California, San Francisco, Box 0808, 2340 Sutter Street, S433, San Francisco, CA 94115, USA., Bortone DS; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Ou Yang TH; Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA., Porta-Pardo E; Barcelona Supercomputing Centre, c/Jordi Girona, 29, 08034 Barcelona, Spain; SBP Medical Discovery Institute, La Jolla, CA 92037, USA., Gao GF; The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA., Plaisier CL; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA; School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85281, USA., Eddy JA; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Ziv E; Department of Medicine, Institute for Human Genetics, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, 1450 3rd St, San Francisco, CA 94143, USA., Culhane AC; Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Paull EO; Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA., Sivakumar IKA; Department of Computer Science, Institute for Computational Medicine; Johns Hopkins University, Baltimore, MD 21218, USA., Gentles AJ; Departments of Medicine and Biomedical Data Science, Stanford University, Stanford, CA 94305, USA., Malhotra R; Seven Bridges Genomics, Cambridge, MA 02142, USA., Farshidfar F; Department of Oncology, University of Calgary, Calgary, AB T2N 4N1, Canada., Colaprico A; Universite libre de Bruxelles (ULB), Computer Science Department, Faculty of Sciences, Boulevard du Triomphe - CP212, 1050 Bruxelles, Belgium., Parker JS; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Mose LE; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Vo NS; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Liu J; Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA., Liu Y; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Rader J; Medical College of Wisconsin, 9200 Wisconsin Avenue, Milwaukee, WI 53226 USA., Dhankani V; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Reynolds SM; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Bowlby R; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Califano A; Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA., Cherniack AD; The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA., Anastassiou D; Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA., Bedognetti D; Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar., Mokrab Y; Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar., Newman AM; Institute for Stem Cell Biology and Regenerative Medicine and Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA., Rao A; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Chen K; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Krasnitz A; Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA., Hu H; Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA., Malta TM; Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil., Noushmehr H; Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil., Pedamallu CS; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Bullman S; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Ojesina AI; University of Alabama at Birmingham, Birmingham, AL 35294, USA., Lamb A; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Zhou W; Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA., Shen H; Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA., Choueiri TK; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Weinstein JN; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Guinney J; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Saltz J; Department of Biomedical Informatics, Stony Brook Medicine, 100 Nicolls Rd, Stony Brook, NY 11794, USA., Holt RA; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Rabkin CS; Division of Cancer Epidemiology and Genetics, National Cancer Institute, 9609 Medical Center Dr., Bethesda, MD 20892, USA., Lazar AJ; Departments of Pathology, Genomics Medicine and Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd-Unit 85, Houston, TX 77030, USA., Serody JS; Department of Medicine and Microbiology and Lineberger Comprehensive Cancer Center, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Demicco EG; Mount Sinai Hospital, Department of Pathology and Laboratory Medicine, 600 University Ave., Toronto, ON M5G 1X5, Canada., Disis ML; UW Medicine Cancer Vaccine Institute, 850 Republican Street, Brotman Building, 2nd Floor, Room 221, Box 358050, University of Washington, Seattle, WA 98109-4714, USA., Vincent BG; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA. Electronic address: benjamin.vincent@unchealth.unc.edu., Shmulevich I; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: ilya.shmulevich@systemsbiology.org.

مؤلفون مشاركون: Cancer Genome Atlas Research Network

المصدر: Immunity [Immunity] 2019 Aug 20; Vol. 51 (2), pp. 411-412.

نوع المنشور: Published Erratum

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 9432918 Publication Model: Print Cited Medium: Internet ISSN: 1097-4180 (Electronic) Linking ISSN: 10747613 NLM ISO Abbreviation: Immunity Subsets: PubMed not MEDLINE; MEDLINE

المؤلفون: Anagnostou V; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland. vanagno1@jhmi.edu velculescu@jhmi.edu.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Forde PM; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., White JR; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Niknafs N; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Hruban C; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Naidoo J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Marrone K; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Sivakumar IKA; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.; Applied Physics Laboratory, Laurel, Maryland., Bruhm DC; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Rosner S; Department of Internal Medicine, Johns Hopkins Bayview Medical Center, Baltimore, Maryland., Phallen J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Leal A; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Adleff V; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Smith KN; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Cottrell TR; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Rhymee L; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Palsgrove DN; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Hann CL; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Levy B; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Feliciano J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Georgiades C; Department of Radiology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Verde F; Department of Radiology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Illei P; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Li QK; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Gabrielson E; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Brock MV; Department of Surgery, Johns Hopkins University School of Medicine, Baltimore, Maryland., Isbell JM; Thoracic Service, Department of Surgery, Memorial Sloan Kettering Cancer Center, New York, New York, New York., Sauter JL; Department of Pathology, Memorial Sloan Kettering Cancer Center, New York, New York., Taube J; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Department of Pathology, Johns Hopkins University School of Medicine, Baltimore, Maryland., Scharpf RB; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland., Karchin R; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland., Pardoll DM; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Chaft JE; Thoracic Oncology Service, Department of Medicine, Memorial Sloan Kettering Cancer Center and Weill Cornell Medical College, New York, New York., Hellmann MD; Thoracic Oncology Service, Department of Medicine, Memorial Sloan Kettering Cancer Center and Weill Cornell Medical College, New York, New York., Brahmer JR; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland., Velculescu VE; The Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University School of Medicine, Baltimore, Maryland. vanagno1@jhmi.edu velculescu@jhmi.edu.; The Bloomberg-Kimmel Institute for Cancer Immunotherapy, Johns Hopkins University School of Medicine, Baltimore, Maryland.; Institute for Computational Medicine, Johns Hopkins University, Baltimore, Maryland.

المصدر: Cancer research [Cancer Res] 2019 Mar 15; Vol. 79 (6), pp. 1214-1225. Date of Electronic Publication: 2018 Dec 12.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: American Association for Cancer Research Country of Publication: United States NLM ID: 2984705R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1538-7445 (Electronic) Linking ISSN: 00085472 NLM ISO Abbreviation: Cancer Res Subsets: MEDLINE

مواضيع طبية MeSH: Carcinoma, Non-Small-Cell Lung/*immunology , Circulating Tumor DNA/*analysis , DNA, Neoplasm/*analysis , Lung Neoplasms/*immunology , Neoplasm, Residual/*immunology , Nivolumab/*therapeutic use, Antineoplastic Agents, Immunological/therapeutic use ; Carcinoma, Non-Small-Cell Lung/drug therapy ; Carcinoma, Non-Small-Cell Lung/genetics ; Carcinoma, Non-Small-Cell Lung/pathology ; Circulating Tumor DNA/genetics ; Cohort Studies ; DNA, Neoplasm/genetics ; Follow-Up Studies ; Humans ; Lung Neoplasms/drug therapy ; Lung Neoplasms/genetics ; Lung Neoplasms/pathology ; Neoplasm, Residual/drug therapy ; Neoplasm, Residual/genetics ; Neoplasm, Residual/pathology ; Prognosis ; Survival Rate

المؤلفون: Thorsson V; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: vesteinn.thorsson@systemsbiology.org., Gibbs DL; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Brown SD; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Wolf D; University of California, San Francisco, Box 0808, 2340 Sutter Street, S433, San Francisco, CA 94115, USA., Bortone DS; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Ou Yang TH; Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA., Porta-Pardo E; Barcelona Supercomputing Centre, c/Jordi Girona, 29, 08034 Barcelona, Spain; SBP Medical Discovery Institute, La Jolla, CA 92037, USA., Gao GF; The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA., Plaisier CL; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA; School of Biological and Health Systems Engineering, Arizona State University, Tempe, AZ 85281, USA., Eddy JA; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Ziv E; Department of Medicine, Institute for Human Genetics, Helen Diller Family Comprehensive Cancer Center, University of California, San Francisco, 1450 3rd St, San Francisco, CA 94143, USA., Culhane AC; Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Paull EO; Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA., Sivakumar IKA; Department of Computer Science, Institute for Computational Medicine; Johns Hopkins University, Baltimore, MD 21218, USA., Gentles AJ; Departments of Medicine and Biomedical Data Science, Stanford University, Stanford, CA 94305, USA., Malhotra R; Seven Bridges Genomics, Cambridge, MA 02142, USA., Farshidfar F; Department of Oncology, University of Calgary, Calgary, AB T2N 4N1, Canada., Colaprico A; Universite libre de Bruxelles (ULB), Computer Science Department, Faculty of Sciences, Boulevard du Triomphe - CP212, 1050 Bruxelles, Belgium., Parker JS; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Mose LE; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Vo NS; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Liu J; Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA., Liu Y; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Rader J; Medical College of Wisconsin, 9200 Wisconsin Avenue, Milwaukee, WI 53226 USA., Dhankani V; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Reynolds SM; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA., Bowlby R; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Califano A; Irving Cancer Research Center, Room 913,1130 St. Nicholas Avenue, New York, NY 10032, USA., Cherniack AD; The Eli and Edythe L. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA 02142, USA., Anastassiou D; Department of Systems Biology and Department of Electrical Engineering, Columbia University, New York, NY 10027, USA., Bedognetti D; Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar., Mokrab Y; Division of Translational Medicine, Research Branch, Sidra Medical and Research Center, PO Box 26999, Doha, Qatar., Newman AM; Institute for Stem Cell Biology and Regenerative Medicine and Department of Biomedical Data Science, Stanford University, Stanford, CA 94305, USA., Rao A; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Chen K; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Krasnitz A; Simons Center for Quantitative Biology, Cold Spring Harbor Laboratory, 1 Bungtown Road, Cold Spring Harbor, NY 11724, USA., Hu H; Chan Soon-Shiong Institute of Molecular Medicine at Windber, Windber, PA 15963, USA., Malta TM; Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil., Noushmehr H; Department of Neurosurgery, Henry Ford Hospital, Detroit, MI 48202, USA; Department of Genetics, Ribeirao Preto Medical School, University of São Paulo, São Paulo, Brazil., Pedamallu CS; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Bullman S; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Ojesina AI; University of Alabama at Birmingham, Birmingham, AL 35294, USA., Lamb A; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Zhou W; Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA., Shen H; Center for Epigenetics, Van Andel Research Institute, Grand Rapids, MI 49503, USA., Choueiri TK; Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Weinstein JN; Department of Bioinformatics and Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA., Guinney J; Sage Bionetworks, 2901 Third Ave, Suite 330, Seattle, WA 98121, USA., Saltz J; Department of Biomedical Informatics, Stony Brook Medicine, 100 Nicolls Rd, Stony Brook, NY 11794, USA., Holt RA; Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver, BC V5Z 4S6, Canada., Rabkin CS; Division of Cancer Epidemiology and Genetics, National Cancer Institute, 9609 Medical Center Dr., Bethesda, MD 20892, USA., Lazar AJ; Departments of Pathology, Genomics Medicine and Translational Molecular Pathology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Blvd-Unit 85, Houston, TX 77030, USA., Serody JS; Department of Medicine and Microbiology and Lineberger Comprehensive Cancer Center, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA., Demicco EG; Mount Sinai Hospital, Department of Pathology and Laboratory Medicine, 600 University Ave., Toronto, ON M5G 1X5, Canada., Disis ML; UW Medicine Cancer Vaccine Institute, 850 Republican Street, Brotman Building, 2nd Floor, Room 221, Box 358050, University of Washington, Seattle, WA 98109-4714, USA., Vincent BG; Lineberger Comprehensive Cancer Center, Curriculum in Bioinformatics and Computational Biology, University of North Carolina, 125 Mason Farm Road, Chapel Hill, NC 27599-7295, USA. Electronic address: benjamin.vincent@unchealth.unc.edu., Shmulevich I; Institute for Systems Biology, 401 Terry Ave N, Seattle, WA 98109, USA. Electronic address: ilya.shmulevich@systemsbiology.org.

مؤلفون مشاركون: Cancer Genome Atlas Research Network

المصدر: Immunity [Immunity] 2018 Apr 17; Vol. 48 (4), pp. 812-830.e14. Date of Electronic Publication: 2018 Apr 05.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 9432918 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4180 (Electronic) Linking ISSN: 10747613 NLM ISO Abbreviation: Immunity Subsets: MEDLINE

مواضيع طبية MeSH: Neoplasms*/classification , Neoplasms*/genetics , Neoplasms*/immunology, Genomics/*methods, Adolescent ; Adult ; Aged ; Aged, 80 and over ; Child ; Female ; Humans ; Interferon-gamma/genetics ; Interferon-gamma/immunology ; Macrophages/immunology ; Male ; Middle Aged ; Prognosis ; Th1-Th2 Balance/physiology ; Transforming Growth Factor beta/genetics ; Transforming Growth Factor beta/immunology ; Wound Healing/genetics ; Wound Healing/immunology ; Young Adult