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1دورية أكاديميةWelcome to the big leaves: Best practices for improving genome annotation in non‐model plant genomes
المؤلفون: Vidya S. Vuruputoor, Daniel Monyak, Karl C. Fetter, Cynthia Webster, Akriti Bhattarai, Bikash Shrestha, Sumaira Zaman, Jeremy Bennett, Susan L. McEvoy, Madison Caballero, Jill L. Wegrzyn
المصدر: Applications in Plant Sciences, Vol 11, Iss 4, Pp n/a-n/a (2023)
مصطلحات موضوعية: BRAKER, gene identification, genome annotation, MAKER, plant genomes, StringTie2, Biology (General), QH301-705.5, Botany, QK1-989
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2168-0450
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2دورية أكاديمية
المؤلفون: Vera Marjorie Elauria Velasco, Alyssa Ferreira, Sumaira Zaman, Devin Noordermeer, Ingo Ensminger, Jill L Wegrzyn
المصدر: G3: Genes, Genomes, Genetics, Vol 13, Iss 2 (2022)
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2160-1836
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3دورية أكاديمية
المؤلفون: Alison D. Scott, Aleksey V. Zimin, Daniela Puiu, Rachael Workman, Monica Britton, Sumaira Zaman, Madison Caballero, Andrew C. Read, Adam J. Bogdanove, Emily Burns, Jill Wegrzyn, Winston Timp, Steven L. Salzberg, David B. Neale
المصدر: G3: Genes, Genomes, Genetics, Vol 10, Iss 11, Pp 3907-3919 (2020)
مصطلحات موضوعية: genome assembly, giant sequoia, sequoiadendron giganteum, disease resistance genes, conifer, gymnosperm, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2160-1836
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4دورية أكاديمية
المؤلفون: David B Neale, Aleksey V Zimin, Sumaira Zaman, Alison D Scott, Bikash Shrestha, Rachael E Workman, Daniela Puiu, Brian J Allen, Zane J Moore, Manoj K Sekhwal, Amanda R De La Torre, Patrick E McGuire, Emily Burns, Winston Timp, Jill L Wegrzyn, Steven L Salzberg
المصدر: G3: Genes, Genomes, Genetics, Vol 12, Iss 1 (2021)
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2160-1836
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5دورية أكاديمية
المؤلفون: Madison Caballero, Edwin Lauer, Jeremy Bennett, Sumaira Zaman, Susan McEvoy, Juan Acosta, Colin Jackson, Laura Townsend, Andrew Eckert, Ross W. Whetten, Carol Loopstra, Jason Holliday, Mihir Mandal, Jill L. Wegrzyn, Fikret Isik
المصدر: Applications in Plant Sciences, Vol 9, Iss 6, Pp n/a-n/a (2021)
مصطلحات موضوعية: exome capture, genomic selection, genotype array, genotyping‐by‐sequencing (GBS), loblolly pine, Pinus taeda, Biology (General), QH301-705.5, Botany, QK1-989
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2168-0450
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6دورية أكاديمية
المؤلفون: David B. Neale, Patrick E. McGuire, Nicholas C. Wheeler, Kristian A. Stevens, Marc W. Crepeau, Charis Cardeno, Aleksey V. Zimin, Daniela Puiu, Geo M. Pertea, U. Uzay Sezen, Claudio Casola, Tomasz E. Koralewski, Robin Paul, Daniel Gonzalez-Ibeas, Sumaira Zaman, Richard Cronn, Mark Yandell, Carson Holt, Charles H. Langley, James A. Yorke, Steven L. Salzberg, Jill L. Wegrzyn
المصدر: G3: Genes, Genomes, Genetics, Vol 7, Iss 9, Pp 3157-3167 (2017)
مصطلحات موضوعية: gymnosperm, mega-genome, conifer, genome assembly, shade tolerance, annotation, Genetics, QH426-470
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2160-1836
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7دورية أكاديمية
المؤلفون: Jill L. Wegrzyn, Margaret A. Staton, Nathaniel R. Street, Dorrie Main, Emily Grau, Nic Herndon, Sean Buehler, Taylor Falk, Sumaira Zaman, Risharde Ramnath, Peter Richter, Lang Sun, Bradford Condon, Abdullah Almsaeed, Ming Chen, Chanaka Mannapperuma, Sook Jung, Stephen Ficklin
المصدر: Frontiers in Plant Science, Vol 10 (2019)
مصطلحات موضوعية: database, content management system, forest tree, bioinformatics, web services, Plant culture, SB1-1110
وصف الملف: electronic resource
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المؤلفون: Sumaira Zaman, Samuel Sledzieski, Bonnie Berger, Yi-Chieh Wu, Mukul S. Bansal
المصدر: Journal of Computational Biology. 30:3-20
مصطلحات موضوعية: Computational Mathematics, Computational Theory and Mathematics, Modeling and Simulation, Genetics, Molecular Biology
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5313eb2d7af79d6379293c6a5897c352
https://doi.org/10.1089/cmb.2021.0507 -
9Welcome to the big leaves: best practices for improving genome annotation in non-model plant genomes
المؤلفون: Vidya S Vuruputoor, Daniel Monyak, Karl C. Fetter, Cynthia Webster, Akriti Bhattarai, Bikash Shrestha, Sumaira Zaman, Jeremy Bennett, Susan L. McEvoy, Madison Caballero, Jill L. Wegrzyn
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_________::c5d9e501a0bf017153d8f6943c864481
https://doi.org/10.1101/2022.10.03.510643 -
10
المؤلفون: Jill L. Wegrzyn, Monica Britton, Steven L. Salzberg, Rachael E. Workman, David B. Neale, Andrew C. Read, Sumaira Zaman, Winston Timp, Emily Burns, Daniela Puiu, Alison Dawn Scott, Madison Caballero, Aleksey V. Zimin, Adam J. Bogdanove
المصدر: G3: Genes|Genomes|Genetics
G3: Genes, Genomes, Genetics, Vol 10, Iss 11, Pp 3907-3919 (2020)مصطلحات موضوعية: 0106 biological sciences, Sequoiadendron giganteum, Cupressaceae, Sequoia, Sequence assembly, QH426-470, 01 natural sciences, Genome, Chromosomes, Trees, Chromosome conformation capture, gymnosperm, 03 medical and health sciences, Genetics, Molecular Biology, Gene, Genetics (clinical), 030304 developmental biology, Sequence (medicine), 0303 health sciences, biology, conifer, High-Throughput Nucleotide Sequencing, Molecular Sequence Annotation, giant sequoia, biology.organism_classification, Sequoiadendron, Genome Report, Evolutionary biology, genome assembly, Nanopore sequencing, disease resistance genes, 010606 plant biology & botany
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4aa857d115ab5b443c4b3f80a4ac2ec
https://doi.org/10.1534/g3.120.401612