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1دورية أكاديمية
المصدر: Scientific Reports, Vol 11, Iss 1, Pp 1-15 (2021)
وصف الملف: electronic resource
Relation: https://doaj.org/toc/2045-2322
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2دورية أكاديمية
المصدر: PLoS Computational Biology, Vol 14, Iss 1, p e1005907 (2018)
مصطلحات موضوعية: Biology (General), QH301-705.5
وصف الملف: electronic resource
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المؤلفون: Talia Zeppelin, Lucy Kate Ladefoged, Birgit Schiøtt
المصدر: Ladefoged, L K, Zeppelin, T & Schiøtt, B 2019, ' Molecular modeling of neurological membrane proteins − from binding sites to synapses ', Neuroscience Letters, vol. 700, pp. 38-49 . https://doi.org/10.1016/j.neulet.2018.05.034
مصطلحات موضوعية: HUMAN DOPAMINE TRANSPORTER, ACCURATE DOCKING, Models, Molecular, 0301 basic medicine, Enhanced sampling, Molecular model, Protein Conformation, Membrane Lipids/chemistry, Molecular dynamics, Ion Channels/chemistry, Molecular mechanics, Ion Channels, Receptors, G-Protein-Coupled, HUMAN SEROTONIN TRANSPORTER, Synapses/chemistry, Membrane Lipids, 03 medical and health sciences, 0302 clinical medicine, Neurotransmitter receptor, Membrane proteins, Animals, Humans, Binding site, Binding Sites, NEUROTRANSMITTER, Receptors, Neurotransmitter/chemistry, DYNAMICS SIMULATIONS, Receptors, G-Protein-Coupled/chemistry, Chemistry, General Neuroscience, COMPUTATIONAL LIPIDOMICS, Membrane Proteins/chemistry, Membrane Proteins, Monoamine transporters, Receptors, Neurotransmitter, DRUG DISCOVERY, X-RAY STRUCTURES, 030104 developmental biology, Metabotropic receptor, Membrane protein, Molecular docking, LIGAND-BINDING, Synapses, FORCE-FIELD, Free energy calculations, Neuroscience research, Neuroscience, 030217 neurology & neurosurgery, Ionotropic effect
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المؤلفون: Mikkel Christensen, Frauke Gräter, Talia Zeppelin, Ana-Nicoleta Bondar, Camilo Aponte-Santamaría, Kevin J. Boyd, Carmen Domene, Peter Pohl, Pedro A. Fernandes, Lucia Sessa, Birgit Schiøtt, Maria J. Ramos, Siewert J. Marrink, Durba Sengupta, Konstantina Karathanou, M. Joanne Lemieux, Peter J. Quinn, Ran Friedman, Csaba Daday, Mónica Pickholz, Stefano Piotto, Fabian Keller, Davit Hakobyan, Valeria Zoni, Syma Khalid, Floris J. van Eerden, Stefano Vanni, Eric R. May, Andreas Heuer, João Coimbra, Marlon Becker, Richard J. Naftalin, Antara Mazumdar, Elena Arutyunova, Simona Concilio
المصدر: Friedman, R, Khalid, S, Aponte-Santamaría, C, Arutyunova, E, Becker, M, Boyd, K J, Christensen, M H, Coimbra, J T S, Concilio, S, Daday, C, van Eerden, F J, Fernandes, P A, Gräter, F, Hakobyan, D, Heuer, A, Karathanou, K, Keller, F, Lemieux, M J, Marrink, S J, May, E R, Mazumdar, A, Naftalin, R, Pickholz, M, Piotto, S, Pohl, P, Quinn, P, Ramos, M J, Schiøtt, B, Sengupta, D, Sessa, L, Vanni, S, Zeppelin, T, Zoni, V, Bondar, A N & Domene, C 2018, ' Understanding Conformational Dynamics of Complex Lipid Mixtures Relevant to Biology ', Journal of Membrane Biology, vol. 251, no. 5-6, pp. 609-631 . https://doi.org/10.1007/s00232-018-0050-y
CONICET Digital (CONICET)
Consejo Nacional de Investigaciones Científicas y Técnicas
instacron:CONICET
The Journal of Membrane Biologyمصطلحات موضوعية: Cell membrane, Computational biophysics, Lipid–protein interactions, Molecular dynamics, Biophysics, Physiology, Cell Biology, CARDIOLIPIN, 0301 basic medicine, BILAYERS, Lipid Bilayers, LIPID PROTEIN INTERACTIONS, Lipid-protein interactions, Computational biology, Molecular Dynamics Simulation, MODEL MEMBRANES, MEMBRANE INSERTION, GLUCOSE, Ciencias Biológicas, purl.org/becyt/ford/1 [https], 03 medical and health sciences, CRYSTAL-STRUCTURE, Topical Review, purl.org/becyt/ford/1.6 [https], ComputingMethodologies_COMPUTERGRAPHICS, RECEPTOR, RECOGNITION, Computational Biology, Human physiology, Biofísica, 030104 developmental biology, MOLECULAR-DYNAMICS, NEU TRANSMEMBRANE DOMAIN, Thermodynamics, CIENCIAS NATURALES Y EXACTAS, Protein Binding
وصف الملف: application/pdf; application/zip; text
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المصدر: Scientific Reports
Zeppelin, T, Pedersen, K B, Berglund, N A, Periole, X & Schiøtt, B 2021, ' Effect of palmitoylation on the dimer formation of the human dopamine transporter ', Scientific Reports, vol. 11, 4164 . https://doi.org/10.1038/s41598-021-83374-y
Zeppelin, T, Pedersen, K B, Berglund, N A, Periole, X & Schiøtt, B 2021, ' Effect of palmitoylation on the dimer formation of the human dopamine transporter ', Scientific Reports, vol. 11, no. 1, 4164 . https://doi.org/10.1038/s41598-021-83374-y
Scientific Reports, Vol 11, Iss 1, Pp 1-15 (2021)مصطلحات موضوعية: 0301 basic medicine, Synaptic cleft, Protein Conformation, Science, Dopamine, Biophysics, Context (language use), Molecular Dynamics Simulation, 01 natural sciences, Article, Reuptake, 03 medical and health sciences, Palmitoylation, 0103 physical sciences, Humans, Serotonin transporter, Dopamine transporter, Serotonin Plasma Membrane Transport Proteins, Dopamine Plasma Membrane Transport Proteins, Multidisciplinary, 010304 chemical physics, biology, Monoamine transporter, Chemistry, Cell Membrane, Transporter, Biological Transport, Computational biology and bioinformatics, 030104 developmental biology, biology.protein, Medicine, Protein Multimerization, Neuroscience
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المؤلفون: Helgi I. Ingólfsson, Harsh Bhatia, Kristy A. Carpenter, Peer-Timo Bremer, Talia Zeppelin, W. F. Drew Bennett, Gautham Dharuman, Pin-Chia Hsu, Felice C. Lightstone, Birgit Schiøtt, Timothy S. Carpenter
المصدر: Ingólfsson, H I, Bhatia, H, Zeppelin, T, Bennett, W F D, Carpenter, K A, Hsu, P C, Dharuman, G, Bremer, P T, Schiøtt, B, Lightstone, F C & Carpenter, T S 2020, ' Capturing Biologically Complex Tissue-Specific Membranes at Different Levels of Compositional Complexity ', The journal of physical chemistry. B, vol. 124, no. 36, pp. 7819-7829 . https://doi.org/10.1021/acs.jpcb.0c03368
The Journal of Physical Chemistry. Bمصطلحات موضوعية: Membranes, 010304 chemical physics, Chemistry, Bilayer, Cell Membrane, Lipid Bilayers, food and beverages, Proteins, Molecular Dynamics Simulation, 010402 general chemistry, 01 natural sciences, Article, 0104 chemical sciences, Surfaces, Coatings and Films, Membrane, Membrane protein, Modulation, 0103 physical sciences, Materials Chemistry, Biophysics, Tissue specific, Physical and Theoretical Chemistry, Function (biology)
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76b94290ba4305e92308fc4131637060
https://pure.au.dk/portal/da/publications/capturing-biologically-complex-tissuespecific-membranes-at-different-levels-of-compositional-complexity(8727b7f8-4ef5-48dd-9400-3f8470d181d8).html -
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المؤلفون: Lucy Kate Ladefoged, Talia Zeppelin, Birgit Schiøtt, Steffen Sinning
المصدر: Zeppelin, T, Ladefoged, L K, Sinning, S & Schiøtt, B 2019, ' Substrate and inhibitor binding to the serotonin transporter : Insights from computational, crystallographic, and functional studies ', Neuropharmacology, vol. 161, 107548 . https://doi.org/10.1016/j.neuropharm.2019.02.030
Zeppelin, T, Ladefoged, L K, Sinning, S & Schiøtt, B 2019, ' Substrate and inhibitor binding to the serotonin transporter : Insights from computational, crystallographic, and functional studies ' Neuropharmacology . https://doi.org/10.1016/j.neuropharm.2019.02.030مصطلحات موضوعية: Serotonin Plasma Membrane Transport Proteins, 0301 basic medicine, Pharmacology, Neurotransmitter transporter, Psychotropic Drugs, Crystallography, biology, Monoamine transporter, Synaptic cleft, Chemistry, Serotonergic, Reuptake, 03 medical and health sciences, Cellular and Molecular Neuroscience, 030104 developmental biology, 0302 clinical medicine, biology.protein, Animals, Humans, Computer Simulation, Serotonin, Reuptake inhibitor, 030217 neurology & neurosurgery, Serotonin transporter
وصف الملف: application/pdf
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::76f45ed5200494fec94f8eadcb8b9b9c
https://pure.au.dk/portal/da/publications/substrate-and-inhibitor-binding-to-the-serotonin-transporter(170d151a-a2d7-46c0-9ee9-d8245a8c16b0).html -
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المصدر: Zeppelin, T, Ladefoged, L K, Sinning, S, Periole, X & Schiøtt, B 2018, ' A direct interaction of cholesterol with the dopamine transporter prevents its out-to-inward transition ', PLOS Computational Biology, vol. 14, no. 1, e1005907 . https://doi.org/10.1371/journal.pcbi.1005907
PLoS Computational Biology, Vol 14, Iss 1, p e1005907 (2018)
PLoS Computational Biologyمصطلحات موضوعية: 0301 basic medicine, Protein Conformation, Dopamine, Amino Acid Motifs, Lipid Bilayers, Dopamine transport, Crystallography, X-Ray, Molecular Dynamics, Synaptic Transmission, Biochemistry, Reuptake, Mathematical and Statistical Techniques, Computational Chemistry, Biochemical Simulations, polycyclic compounds, Biology (General), Neurotransmitter Agents, Principal Component Analysis, Crystallography, Ecology, biology, Chemistry, Physics, Simulation and Modeling, Condensed Matter Physics, Lipids, Cholesterol, Drosophila melanogaster, Computational Theory and Mathematics, Modeling and Simulation, Physical Sciences, Crystal Structure, lipids (amino acids, peptides, and proteins), Statistics (Mathematics), Signal Transduction, Research Article, medicine.drug, Biophysical Simulations, Synaptic cleft, QH301-705.5, Biophysics, Molecular Dynamics Simulation, Neurotransmission, Research and Analysis Methods, 03 medical and health sciences, Cellular and Molecular Neuroscience, Genetics, medicine, Animals, Humans, Solid State Physics, Computer Simulation, Statistical Methods, Molecular Biology, Ecology, Evolution, Behavior and Systematics, Dopamine transporter, Dopamine Plasma Membrane Transport Proteins, Binding Sites, technology, industry, and agriculture, Biology and Life Sciences, Computational Biology, Transporter, 030104 developmental biology, Monoamine neurotransmitter, Vesicular Monoamine Transport Proteins, Multivariate Analysis, biology.protein, Software, Mathematics
وصف الملف: application/pdf
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a010bc87097a0f4c165f140b417f92ed
https://pure.au.dk/ws/files/121697211/zeppelin_a_direct_interaciton.pdf -
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المؤلفون: Talia Zeppelin, Birgit Schiøtt, Xavier Periole
المصدر: Scientific Reports
Periole, X, Zeppelin, T & Schiøtt, B 2018, ' Dimer Interface of the Human Serotonin Transporter and Effect of the Membrane Composition ', Scientific Reports, vol. 8, no. 1, 22912 . https://doi.org/10.1038/s41598-018-22912-7
Scientific Reports, Vol 8, Iss 1, Pp 1-15 (2018)مصطلحات موضوعية: 0301 basic medicine, Protein Conformation, alpha-Helical, Protein Conformation, Dimer, lcsh:Medicine, Molecular Dynamics Simulation, Phosphatidylinositols, 01 natural sciences, Article, 03 medical and health sciences, chemistry.chemical_compound, Molecular dynamics, Protein structure, 0103 physical sciences, Humans, lcsh:Science, Serotonin Plasma Membrane Transport Proteins, Multidisciplinary, 010304 chemical physics, Protein Stability, lcsh:R, Cell Membrane, Biological membrane, Transmembrane domain, 030104 developmental biology, Membrane, Cholesterol, chemistry, Membrane protein, Biophysics, lcsh:Q, Umbrella sampling, Protein Multimerization
وصف الملف: application/pdf
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المؤلفون: Ina Pöhner, Flavio Di Pisa, Talia Zeppelin, Francesca Spyrakis, Stefano Mangani, Alberto Venturelli, Maria Paola Costi, Antonio Quotadamo, Alessio Bonucci, Rebecca C. Wade, Joanna Panecka-Hofman, Lucia Dello Iacono
مصطلحات موضوعية: 0301 basic medicine, Folate pathway, Protein family, Trypanosoma cruzi, Biophysics, Plasma protein binding, Biology, Selective inhibition, Biochemistry, 03 medical and health sciences, chemistry.chemical_compound, Multienzyme Complexes, Drug Discovery, Humans, Binding site, Anti-parasitic drug, Enzyme inhibitor, Structure-based drug design, Trypanosomatids, Molecular Biology, Binding Sites, Crystallography, Drug discovery, Protein engineering, Thymidylate Synthase, Trypanocidal Agents, 3. Good health, Tetrahydrofolate Dehydrogenase, 030104 developmental biology, chemistry, Folate receptor, Antifolate, Folic Acid Antagonists, Oxidoreductases, Function (biology)
URL الوصول: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3329f9b96efeb212e0b58939c2f5f01b
http://hdl.handle.net/11365/1033685
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