المؤلفون: Ctortecka C; Broad Institute of MIT and Harvard, Cambridge, MA, USA. cctortec@broadinstitute.org., Clark NM; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Boyle BW; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Seth A; Cellenion SASU, Lyon, France., Mani DR; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Udeshi ND; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Carr SA; Broad Institute of MIT and Harvard, Cambridge, MA, USA. scarr@broad.mit.edu.

المصدر: Nature communications [Nat Commun] 2024 Jul 08; Vol. 15 (1), pp. 5707. Date of Electronic Publication: 2024 Jul 08.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Single-Cell Analysis*/methods , Proteomics*/methods , Proteome*/metabolism, Humans ; HEK293 Cells ; Ubiquitin-Protein Ligases/metabolism ; Mass Spectrometry/methods

المؤلفون: Xu C; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Biology Graduate Program, Stanford University, Stanford, CA 94305, USA., Li Z; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Biology Graduate Program, Stanford University, Stanford, CA 94305, USA., Lyu C; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Hu Y; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Biology Graduate Program, Stanford University, Stanford, CA 94305, USA., McLaughlin CN; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Wong KKL; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Xie Q; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Neurosciences Graduate Program, Stanford University, Stanford, CA 94305, USA., Luginbuhl DJ; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Li H; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Udeshi ND; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Svinkina T; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Mani DR; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Han S; Departments of Genetics, Biology, and Chemistry, Chan Zuckerberg Biohub, Stanford University, Stanford, CA 94305, USA., Li T; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Li Y; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Biology Graduate Program, Stanford University, Stanford, CA 94305, USA., Guajardo R; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA., Ting AY; Departments of Genetics, Biology, and Chemistry, Chan Zuckerberg Biohub, Stanford University, Stanford, CA 94305, USA., Carr SA; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Li J; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA; Biology Graduate Program, Stanford University, Stanford, CA 94305, USA; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, USA. Electronic address: lij6@janelia.hhmi.org., Luo L; Department of Biology and Howard Hughes Medical Institute, Stanford University, Stanford, CA 94305, USA. Electronic address: lluo@stanford.edu.

المصدر: Cell [Cell] 2024 Jul 03. Date of Electronic Publication: 2024 Jul 03.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

المؤلفون: Simpson MS; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA.; Graduate School of Life Sciences, Utrecht University, Utrecht, Netherlands., De Luca H; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA., Cauthorn S; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA.; Division of Gastroenterology, Beth Israel Deaconess Medical Center, Boston, MA, USA., Luong P; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA., Udeshi ND; Broad Institute of MIT and Harvard , Cambridge, MA, USA., Svinkina T; Broad Institute of MIT and Harvard , Cambridge, MA, USA., Schmieder SS; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA.; Department of Pediatrics, Harvard Medical School, Boston, MA, USA., Carr SA; Broad Institute of MIT and Harvard , Cambridge, MA, USA., Grey MJ; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA.; Division of Gastroenterology, Beth Israel Deaconess Medical Center, Boston, MA, USA.; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.; Harvard Digestive Disease Center , Boston, MA, USA., Lencer WI; Division of Gastroenterology, Hepatology and Nutrition, Boston Children's Hospital, Boston MA, USA.; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.; Harvard Digestive Disease Center , Boston, MA, USA.

المصدر: The Journal of cell biology [J Cell Biol] 2024 Jul 01; Vol. 223 (7). Date of Electronic Publication: 2024 Apr 05.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Rockefeller University Press Country of Publication: United States NLM ID: 0375356 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1540-8140 (Electronic) Linking ISSN: 00219525 NLM ISO Abbreviation: J Cell Biol Subsets: MEDLINE

مواضيع طبية MeSH: Cholera Toxin*/genetics , Cholera Toxin*/metabolism , Endoribonucleases*/genetics , Endoribonucleases*/metabolism , Protein Serine-Threonine Kinases*/genetics , Protein Serine-Threonine Kinases*/metabolism , Unfolded Protein Response*, Endoplasmic Reticulum Stress ; Signal Transduction ; Humans ; Animals ; Mice ; Cell Line

المؤلفون: Ctortecka C; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA., Clark NM; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA., Boyle B; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA., Seth A; Cellenion SASU, 60F avenue Rockefeller, 69008 Lyon, France., Mani DR; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA., Udeshi ND; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA., Carr SA; Broad Institute of MIT and Harvard, 415 Main Street, 02142 Cambridge, MA, USA.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2024 Jan 22. Date of Electronic Publication: 2024 Jan 22.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Song S; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Cho B; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Weiner AT; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Nissen SB; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.; The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), University of Copenhagen, Copenhagen, Denmark., Ojeda Naharros I; Department of Ophthalmology, University of California, San Francisco, San Francisco, CA, USA., Sanchez Bosch P; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Suyama K; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA., Hu Y; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA, USA., He L; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA, USA., Svinkina T; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Udeshi ND; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Carr SA; Broad Institute of MIT and Harvard, Cambridge, MA, USA., Perrimon N; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA, USA.; Howard Hughes Medical Institute, Boston, MA, USA., Axelrod JD; Department of Pathology, Stanford University School of Medicine, Stanford, CA, USA.

المصدر: EMBO reports [EMBO Rep] 2023 Dec 06; Vol. 24 (12), pp. e56997. Date of Electronic Publication: 2023 Nov 17.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 100963049 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-3178 (Electronic) Linking ISSN: 1469221X NLM ISO Abbreviation: EMBO Rep Subsets: MEDLINE

مواضيع طبية MeSH: Drosophila Proteins*/genetics , Drosophila Proteins*/metabolism , Membrane Proteins*/metabolism, Animals ; Cell Polarity/physiology ; Protein Phosphatase 1/genetics ; Protein Phosphatase 1/metabolism ; Protein Processing, Post-Translational ; Protein Serine-Threonine Kinases/metabolism ; Signal Transduction

المؤلفون: Ctortecka C; Research Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Vienna, Austria; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. Electronic address: cctortec@broadinstitute.org., Hartlmayr D; Research Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Vienna, Austria; Cellenion SASU, Lyon, France., Seth A; Cellenion SASU, Lyon, France., Mendjan S; Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria., Tourniaire G; Cellenion SASU, Lyon, France., Udeshi ND; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA., Carr SA; Broad Institute of MIT and Harvard, Cambridge, Massachusetts, USA. Electronic address: scarr@broad.mit.edu., Mechtler K; Research Institute of Molecular Pathology (IMP), Vienna BioCenter (VBC), Vienna, Austria; Cellenion SASU, Lyon, France; Institute of Molecular Biotechnology of the Austrian Academy of Sciences (IMBA), Vienna BioCenter (VBC), Vienna, Austria; The Gregor Mendel Institute of Molecular Plant Biology of the Austrian Academy of Sciences (GMI), Vienna BioCenter (VBC), Vienna, Austria. Electronic address: Karl.mechtler@imp.ac.at.

المصدر: Molecular & cellular proteomics : MCP [Mol Cell Proteomics] 2023 Dec; Vol. 22 (12), pp. 100665. Date of Electronic Publication: 2023 Oct 14.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 101125647 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-9484 (Electronic) Linking ISSN: 15359476 NLM ISO Abbreviation: Mol Cell Proteomics Subsets: MEDLINE

مواضيع طبية MeSH: Proteomics*/methods , Proteome*/metabolism, Humans ; Workflow ; Mass Spectrometry/methods

المؤلفون: Song S; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.; Present Address: GenScript, 860 Centennial Avenue, Piscataway, NJ, 08854, USA., Cho B; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA., Weiner AT; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA., Nissen SB; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.; The Novo Nordisk Foundation Center for Stem Cell Medicine (reNEW), University of Copenhagen, Blegdamsvej 3B, DK-2200 Copenhagen N, Denmark., Naharros IO; Department of Ophthalmology, University of California, San Francisco, San Francisco, CA 94143-3120, USA., Bosch PS; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA., Suyama K; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA., Hu Y; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA 02115, USA., He L; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA 02115, USA.; Present Address: School of Life Sciences, University of Science and Technology of China, Hefei 230027, China., Svinkina T; Broad Institute of MIT and Harvard, Cambridge, MA 02142., Udeshi ND; Broad Institute of MIT and Harvard, Cambridge, MA 02142., Carr SA; Broad Institute of MIT and Harvard, Cambridge, MA 02142., Perrimon N; Department of Genetics, Blavatnik Institute, Harvard Medical School, Harvard University, Boston, MA 02115, USA.; Howard Hughes Medical Institute, Boston, MA 02138, USA., Axelrod JD; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Sep 13. Date of Electronic Publication: 2023 Sep 13.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Qin W; Departments of Biology, Genetics, and Chemistry, Stanford University, Stanford, CA 94305, USA., Cheah JS; Departments of Biology, Genetics, and Chemistry, Stanford University, Stanford, CA 94305, USA., Xu C; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Messing J; Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA., Freibaum BD; Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA., Boeynaems S; Department of Molecular and Human Genetics, Therapeutic Innovation Center, Center for Alzheimer's and Neurodegenerative Diseases, and Dan L. Duncan Comprehensive Cancer Center, Baylor College of Medicine, Houston, TX 77030, USA; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, TX 77030, USA., Taylor JP; Department of Cell and Molecular Biology, St. Jude Children's Research Hospital, Memphis, TN 38105, USA., Udeshi ND; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Carr SA; The Broad Institute of MIT and Harvard, Cambridge, MA 02142, USA., Ting AY; Departments of Biology, Genetics, and Chemistry, Stanford University, Stanford, CA 94305, USA; Chan Zuckerberg Biohub-San Francisco, San Francisco, CA 94158, USA. Electronic address: ayting@stanford.edu.

المصدر: Cell [Cell] 2023 Jul 20; Vol. 186 (15), pp. 3307-3324.e30. Date of Electronic Publication: 2023 Jun 28.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

مواضيع طبية MeSH: Proteome*/metabolism , Mitochondria*/metabolism, Cell Nucleolus/metabolism ; Mass Spectrometry/methods ; Gene Expression Regulation

المؤلفون: Mansur A; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States., Joseph R; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States., Kim ES; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States., Jean-Beltran PM; Proteomics Platform, Broad Institute of MIT and Harvard, Cambridge, United States., Udeshi ND; Proteomics Platform, Broad Institute of MIT and Harvard, Cambridge, United States., Pearce C; Proteomics Platform, Broad Institute of MIT and Harvard, Cambridge, United States., Jiang H; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States.; Department of Pharmacology and Molecular Sciences, Johns Hopkins University School of Medicine, Boston, United States., Iwase R; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States.; Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, United States., Milev MP; Department of Biology, Concordia University of Edmonton, Montreal, Canada., Almousa HA; Department of Biology, Concordia University of Edmonton, Montreal, Canada., McNamara E; Faculty of Health and Medical Sciences, Centre of Medical Research, Harry Perkins Institute of Medical Research, University of Western Australia, Perth, Australia., Widrick J; Division of Genetics, Boston Children's Hospital, Harvard Medical School, Boston, United States., Perez C; Department of Anesthesiology, Brigham and Women's Hospital, Harvard Medical School, Boston, United States., Ravenscroft G; Faculty of Health and Medical Sciences, Centre of Medical Research, Harry Perkins Institute of Medical Research, University of Western Australia, Perth, Australia., Sacher M; Department of Biology, Concordia University of Edmonton, Montreal, Canada.; Department of Anatomy and Cell Biology, McGill University, Montreal, Canada., Cole PA; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States., Carr SA; Proteomics Platform, Broad Institute of MIT and Harvard, Cambridge, United States., Gupta VA; Division of Genetics, Department of Medicine, Brigham and Women's Hospital, Harvard Medical School, Boston, United States.

المصدر: ELife [Elife] 2023 Jul 11; Vol. 12. Date of Electronic Publication: 2023 Jul 11.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE

مواضيع طبية MeSH: Muscle Proteins*/genetics , Muscle Proteins*/metabolism , Zebrafish*/metabolism, Animals ; Humans ; Proteome/metabolism ; Muscle, Skeletal/metabolism ; Ubiquitination ; Sarcomeres/metabolism ; Ubiquitin/metabolism ; Endoplasmic Reticulum/metabolism ; Muscle Development ; Disease Progression

المؤلفون: Phulphagar KM, Ctortecka C, Jacome ASV, Klaeger S, Verzani EK, Hernandez GM, Udeshi ND, Clauser KR, Abelin JG, Carr SA

المصدر: Molecular & cellular proteomics : MCP [Mol Cell Proteomics] 2023 Jun; Vol. 22 (6), pp. 100563. Date of Electronic Publication: 2023 May 03.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 101125647 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1535-9484 (Electronic) Linking ISSN: 15359476 NLM ISO Abbreviation: Mol Cell Proteomics Subsets: MEDLINE

مواضيع طبية MeSH: Histocompatibility Antigens Class I*/metabolism , Neoplasms*/metabolism, Male ; Humans ; Mass Spectrometry/methods ; Peptides/metabolism ; Cell Line