المؤلفون: Varga, JK, Boncz, I, Grmela, G, Pápai-Székely, Z, Mátyus, M, Zsoldos, G, Kiss, P, Grassalkovich, A, Kívés, Z

المصدر: In Value in Health December 2022 25(12) Supplement:S293-S293

المؤلفون: Lee CY; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Hubrich D; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Varga JK; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, 9112001, Israel., Schäfer C; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Welzel M; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Schumbera E; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany.; Computational Biology and Data Mining Group Biozentrum I, 55128, Mainz, Germany., Djokic M; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Strom JM; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Schönfeld J; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Geist JL; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Polat F; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Gibson TJ; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, 69117, Germany., Keller Valsecchi CI; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany., Kumar M; Structural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, 69117, Germany., Schueler-Furman O; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, 9112001, Israel. ora.furman-schueler@mail.huji.ac.il., Luck K; Institute of Molecular Biology (IMB) gGmbH, 55128, Mainz, Germany. k.luck@imb-mainz.de.

المصدر: Molecular systems biology [Mol Syst Biol] 2024 Feb; Vol. 20 (2), pp. 75-97. Date of Electronic Publication: 2024 Jan 15.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: EMBO Press Country of Publication: England NLM ID: 101235389 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1744-4292 (Electronic) Linking ISSN: 17444292 NLM ISO Abbreviation: Mol Syst Biol Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/metabolism , Carrier Proteins*, Humans ; Membrane Proteins/metabolism

المؤلفون: Banerjee S; Department of Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Varga JK; Department of Microbiology and Molecular Genetics, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Kumar M; Department of Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Zoltsman G; Department of Chemical and Structural Biology, Weizmann Institute of Sciences, Rehovot, Israel., Rotem-Bamberger S; Department of Microbiology and Molecular Genetics, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Cohen-Kfir E; Department of Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Isupov MN; The Henry Wellcome Building for Biocatalysis, Biosciences, University of Exeter, Exeter, UK., Rosenzweig R; Department of Chemical and Structural Biology, Weizmann Institute of Sciences, Rehovot, Israel., Schueler-Furman O; Department of Microbiology and Molecular Genetics, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Wiener R; Department of Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel.

المصدر: EMBO reports [EMBO Rep] 2023 Dec 06; Vol. 24 (12), pp. e56920. Date of Electronic Publication: 2023 Nov 21.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 100963049 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1469-3178 (Electronic) Linking ISSN: 1469221X NLM ISO Abbreviation: EMBO Rep Subsets: MEDLINE

مواضيع طبية MeSH: Binding Sites*, Crystallography, X-Ray

المؤلفون: Schweke H; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, Israel., Xu Q; Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania, USA., Tauriello G; Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Pantolini L; Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Schwede T; Biozentrum, University of Basel & SIB Swiss Institute of Bioinformatics, Basel, Switzerland., Cazals F; Centre Inria d'Université Côte d'Azur, Sophia-Antipolis, France., Lhéritier A; Amadeus SAS, Sophia-Antipolis, France., Fernandez-Recio J; Instituto de Ciencias de la Vid y del Vino (ICVV), CSIC-UR-Gobierno de La Rioja, Logroño, Spain., Rodríguez-Lumbreras LA; Instituto de Ciencias de la Vid y del Vino (ICVV), CSIC-UR-Gobierno de La Rioja, Logroño, Spain., Schueler-Furman O; Department of Microbiology and Molecular Genetics, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Varga JK; Department of Microbiology and Molecular Genetics, The Institute for Medical Research Israel-Canada, Hebrew University-Hadassah Medical School, Jerusalem, Israel., Jiménez-García B; Computational Structural Biology Group, Department of Chemistry, Bijvoet Centre, Faculty of Science, Utrecht University, Utrecht, The Netherlands.; Zymvol Biomodeling SL, Barcelona, Spain., Réau MF; Computational Structural Biology Group, Department of Chemistry, Bijvoet Centre, Faculty of Science, Utrecht University, Utrecht, The Netherlands., Bonvin AMJJ; Computational Structural Biology Group, Department of Chemistry, Bijvoet Centre, Faculty of Science, Utrecht University, Utrecht, The Netherlands., Savojardo C; Biocomputing Group, Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy., Martelli PL; Biocomputing Group, Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy., Casadio R; Biocomputing Group, Department of Pharmacy and Biotechnology, University of Bologna, Bologna, Italy., Tubiana J; Blavatnik School of Computer Science, Tel Aviv University, Tel Aviv, Israel., Wolfson HJ; Blavatnik School of Computer Science, Tel Aviv University, Tel Aviv, Israel., Oliva R; Department of Sciences and Technologies, University of Naples 'Parthenope', Naples, Italy., Barradas-Bautista D; Kaust Visualization Lab, Core lab Division, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Ricciardelli T; Physical Sciences and Engineering Division, Kaust Catalysis Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Cavallo L; Physical Sciences and Engineering Division, Kaust Catalysis Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia., Venclovas Č; Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania., Olechnovič K; Institute of Biotechnology, Life Sciences Center, Vilnius University, Vilnius, Lithuania., Guerois R; Institute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France., Andreani J; Institute for Integrative Biology of the Cell (I2BC), Commissariat à l'Energie Atomique, CNRS, Université Paris-Sud, Université Paris-Saclay, Gif-sur-Yvette, France., Martin J; Univ Lyon, Université Claude Bernard Lyon 1, CNRS, UMR 5086 MMSB, Lyon, France., Wang X; Department of Computer Science, Purdue University, West Lafayette, Indiana, USA., Terashi G; Department of Biological Sciences, Purdue University, West Lafayette, Indiana, USA., Sarkar D; Department of Biological Sciences, Purdue University, West Lafayette, Indiana, USA., Christoffer C; Department of Computer Science, Purdue University, West Lafayette, Indiana, USA., Aderinwale T; Department of Computer Science, Purdue University, West Lafayette, Indiana, USA., Verburgt J; Department of Biological Sciences, Purdue University, West Lafayette, Indiana, USA., Kihara D; Department of Computer Science, Purdue University, West Lafayette, Indiana, USA.; Department of Biological Sciences, Purdue University, West Lafayette, Indiana, USA., Marchand A; Laboratory of Protein Design and Immunoengineering, Ecole polytechnique fédérale de Lausanne (EPFL), Lausanne, Switzerland., Correia BE; Laboratory of Protein Design and Immunoengineering, Ecole polytechnique fédérale de Lausanne (EPFL), Lausanne, Switzerland., Duan R; Department of Physics and Astronomy, Department of Biochemistry, Dalton Cardiovascular Research Center, Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA., Qiu L; Department of Physics and Astronomy, Department of Biochemistry, Dalton Cardiovascular Research Center, Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA., Xu X; Department of Physics and Astronomy, Department of Biochemistry, Dalton Cardiovascular Research Center, Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA., Zhang S; Department of Physics and Astronomy, Department of Biochemistry, Dalton Cardiovascular Research Center, Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA., Zou X; Department of Physics and Astronomy, Department of Biochemistry, Dalton Cardiovascular Research Center, Institute for Data Science and Informatics, University of Missouri, Columbia, Missouri, USA., Dey S; Department of Bioscience and Bioengineering, Indian Institute of Technology Jodhpur, Karwar, Rajasthan, India., Dunbrack RL; Institute for Cancer Research, Fox Chase Cancer Center, Philadelphia, Pennsylvania, USA., Levy ED; Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot, Israel., Wodak SJ; VIB-VUB Center for Structural Biology, Brussels, Belgium.

المصدر: Proteomics [Proteomics] 2023 Sep; Vol. 23 (17), pp. e2200323. Date of Electronic Publication: 2023 Jun 27.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 101092707 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1615-9861 (Electronic) Linking ISSN: 16159853 NLM ISO Abbreviation: Proteomics Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/metabolism, Reproducibility of Results ; Protein Binding

المؤلفون: Varga JK; Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, 9112001, Israel., Schueler-Furman O; Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, 9112001, Israel.

المصدر: Angewandte Chemie (International ed. in English) [Angew Chem Int Ed Engl] 2023 Jul 10; Vol. 62 (28), pp. e202303526. Date of Electronic Publication: 2023 May 15.

نوع المنشور: Journal Article; Review; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Wiley-VCH Country of Publication: Germany NLM ID: 0370543 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1521-3773 (Electronic) Linking ISSN: 14337851 NLM ISO Abbreviation: Angew Chem Int Ed Engl Subsets: MEDLINE

مواضيع طبية MeSH: Proteins*/chemistry , Peptides*/chemistry, Protein Binding ; Binding Sites ; Protein Domains

المؤلفون: Khramushin A; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel., Ben-Aharon Z; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel., Tsaban T; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel., Varga JK; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel., Avraham O; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel., Schueler-Furman O; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem 9112001, Israel.

المصدر: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2022 May 03; Vol. 119 (18), pp. e2121153119. Date of Electronic Publication: 2022 Apr 28.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: National Academy of Sciences Country of Publication: United States NLM ID: 7505876 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1091-6490 (Electronic) Linking ISSN: 00278424 NLM ISO Abbreviation: Proc Natl Acad Sci U S A Subsets: MEDLINE

مواضيع طبية MeSH: Membrane Proteins*/metabolism , Peptides*/chemistry, Biophysical Phenomena ; Protein Binding ; Protein Conformation

المؤلفون: Varga JK; Department of Microbiology and Molecular Genetics, Institute for Medical Research Israel-Canada (IMRIC), The Hebrew University of Jerusalem, Faculty of Medicine, POB 12272, 9112102, Jerusalem, Israel., Diffley K; Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI, 48109, USA., Welker Leng KR; Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI, 48109, USA., Fierke CA; Department of Chemistry, University of Michigan, 930 North University Avenue, Ann Arbor, MI, 48109, USA.; Department of Biochemistry, Brandeis University, 415 South Street, Waltham, MA, 02453, USA., Schueler-Furman O; Department of Microbiology and Molecular Genetics, Institute for Medical Research Israel-Canada (IMRIC), The Hebrew University of Jerusalem, Faculty of Medicine, POB 12272, 9112102, Jerusalem, Israel. ora.furman-schueler@mail.huji.ac.il.

المصدر: Scientific reports [Sci Rep] 2022 Feb 02; Vol. 12 (1), pp. 1788. Date of Electronic Publication: 2022 Feb 02.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

مواضيع طبية MeSH: Histone Deacetylase 6/*chemistry , Histone Deacetylase 6/*metabolism , Zebrafish/*metabolism, Animals ; Enzyme Assays ; Humans ; Protein Conformation ; Substrate Specificity ; Zebrafish Proteins/chemistry ; Zebrafish Proteins/metabolism

المؤلفون: Tsaban T; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel., Varga JK; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel., Avraham O; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel., Ben-Aharon Z; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel., Khramushin A; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel., Schueler-Furman O; Department of Microbiology and Molecular Genetics, Institute for Biomedical Research Israel-Canada, Faculty of Medicine, The Hebrew University of Jerusalem, Jerusalem, Israel. ora.furman-schueler@mail.huji.ac.il.

المصدر: Nature communications [Nat Commun] 2022 Jan 10; Vol. 13 (1), pp. 176. Date of Electronic Publication: 2022 Jan 10.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE

مواضيع طبية MeSH: Neural Networks, Computer* , Protein Folding* , Software*, Peptides/*chemistry , Proteins/*chemistry, Amino Acid Sequence ; Binding Sites ; Models, Molecular ; Molecular Docking Simulation ; Peptides/metabolism ; Protein Binding ; Protein Conformation, alpha-Helical ; Protein Conformation, beta-Strand ; Protein Interaction Domains and Motifs ; Protein Interaction Mapping ; Proteins/metabolism

المؤلفون: Tálas A; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.; School of Ph.D. Studies, Semmelweis University, Budapest, Hungary., Huszár K; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.; Gene Design Ltd, Szeged, Hungary., Kulcsár PI; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.; Biospiral-2006 Ltd, Szeged, Hungary.; School of Ph.D. Studies, University of Szeged, Hungary., Varga JK; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary., Varga É; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.; School of Ph.D. Studies, University of Szeged, Hungary.; Institute of Biochemistry, Biological Research Centre, Szeged, Hungary., Tóth E; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary., Welker Z; Biospiral-2006 Ltd, Szeged, Hungary., Erdős G; Institute of Advanced Studies, Kőszeg, Hungary., Pach PF; Institute of Advanced Studies, Kőszeg, Hungary., Welker Á; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary., Györgypál Z; Institute of Biophysics, Biological Research Centre, Szeged, Hungary., Tusnády GE; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary., Welker E; Institute of Enzymology, Research Centre for Natural Sciences, Budapest, Hungary.; Institute of Biochemistry, Biological Research Centre, Szeged, Hungary.

المصدر: Nucleic acids research [Nucleic Acids Res] 2021 Apr 06; Vol. 49 (6), pp. e31.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE

مواضيع طبية MeSH: CRISPR-Associated Protein 9*/genetics, RNA/*chemistry, Algorithms ; Animals ; Base Sequence ; Cell Line, Tumor ; DNA Cleavage ; Genetic Variation ; Mice ; Streptococcus pyogenes/enzymology

المؤلفون: Langó T; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Pataki ZG; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary.; Soft Flow Ltd. Ürögi fasor 2/a, Pécs, H-7634, Hungary., Turiák L; Institute of Organic Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Ács A; Institute of Organic Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Varga JK; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Várady G; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Kucsma N; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Drahos L; Institute of Organic Chemistry, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary., Tusnády GE; Institute of Enzymology, Research Centre for Natural Sciences, Magyar tudósok krt 2, Budapest, H-1117, Hungary. tusnady.gabor@ttk.hu.

المصدر: Scientific reports [Sci Rep] 2020 Jun 01; Vol. 10 (1), pp. 8880. Date of Electronic Publication: 2020 Jun 01.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE

مواضيع طبية MeSH: Membrane Proteins/*chemistry , Membrane Proteins/*metabolism, Algorithms ; Biotinylation ; Databases, Protein ; HL-60 Cells ; Humans ; Microscopy, Confocal ; Protein Domains ; Proteolysis ; Staining and Labeling ; Tandem Mass Spectrometry