المؤلفون: Lusardi, RA, Nichols, AL, Willis, AD, Jeffres, CA, Kiers, AH, Van Nieuwenhuyse, EE, Dahlgren, RA

المصدر: Water (Switzerland). 13(12)

مصطلحات موضوعية: spring-fed rivers, coldwater fishes, climate change, conservation

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/6k201570

المؤلفون: Trinh P; Department of Biostatistics, University of Washington, Seattle, USA.; Department of Environmental and Occupational Health Sciences, University of Washington, Seattle, USA., Teichman S; Department of Statistics, University of Washington, Seattle, USA., Roberts MC; Department of Environmental and Occupational Health Sciences, University of Washington, Seattle, USA., Rabinowitz PM; Department of Environmental and Occupational Health Sciences, University of Washington, Seattle, USA., Willis AD; Department of Biostatistics, University of Washington, Seattle, USA. adwillis@uw.edu.; Department of Statistics, University of Washington, Seattle, USA. adwillis@uw.edu.

المصدر: BMC genomics [BMC Genomics] 2024 Jul 20; Vol. 25 (1), pp. 708. Date of Electronic Publication: 2024 Jul 20.

نوع المنشور: Journal Article; Comparative Study

بيانات الدورية: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE

مواضيع طبية MeSH: Gastrointestinal Microbiome*/genetics , Metagenome*, Humans ; Cross-Sectional Studies ; Female ; Dairying ; Metagenomics/methods ; Adult ; Animals ; Middle Aged ; Bacteria/genetics ; Bacteria/classification ; Farmers ; Male ; Drug Resistance, Bacterial/genetics

المؤلفون: Teichman S; University of Washington Department of Statistics, Box 354322, Seattle, WA 98195-4322, USA., Lee MD; KBR NASA Ames Research Center, PO Box 1, Moffett Field, CA 94035-1000.; Blue Marble Space Institute of Science, 600 1st Avenue, 1st Floor, Seattle, WA 98104, USA., Willis AD; University of Washington Department of Biostatistics, Hans Rosling Center for Population Health, Box 351617, Seattle, WA 98195-1617, USA.

المصدر: Biostatistics (Oxford, England) [Biostatistics] 2024 Jul 01; Vol. 25 (3), pp. 786-800.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Oxford University Press Country of Publication: England NLM ID: 100897327 Publication Model: Print Cited Medium: Internet ISSN: 1468-4357 (Electronic) Linking ISSN: 14654644 NLM ISO Abbreviation: Biostatistics Subsets: MEDLINE

مواضيع طبية MeSH: Phylogeny* , Genome, Bacterial*/genetics, Evolution, Molecular ; Streptococcus/genetics ; Streptococcus/classification ; Prevotella/genetics ; Prevotella/classification ; Microbiota/genetics

المؤلفون: Zepeda-Rivera M; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Minot SS; Data Core, Shared Resources, Fred Hutchinson Cancer Center, Seattle, WA, USA., Bouzek H; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Wu H; Human Biology Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Blanco-Míguez A; Department of Computational, Cellular and Integrative Biology, University of Trento, Trento, Italy., Manghi P; Department of Computational, Cellular and Integrative Biology, University of Trento, Trento, Italy., Jones DS; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., LaCourse KD; Human Biology Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Wu Y; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., McMahon EF; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Park SN; Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju, Republic of Korea., Lim YK; Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju, Republic of Korea., Kempchinsky AG; Human Biology Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Willis AD; Department of Biostatistics, University of Washington, Seattle, WA, USA., Cotton SL; Forsyth Institute, Cambridge, MA, USA., Yost SC; Forsyth Institute, Cambridge, MA, USA., Sicinska E; Department of Pathology, Dana-Farber Cancer Institute, Boston, MA, USA., Kook JK; Korean Collection for Oral Microbiology and Department of Oral Biochemistry, School of Dentistry, Chosun University, Gwangju, Republic of Korea., Dewhirst FE; Forsyth Institute, Cambridge, MA, USA.; Department of Oral Medicine, Infection and Immunity, Harvard School of Dental Medicine, Boston, MA, USA., Segata N; Department of Computational, Cellular and Integrative Biology, University of Trento, Trento, Italy., Bullman S; Human Biology Division, Fred Hutchinson Cancer Center, Seattle, WA, USA. sbullman@fredhutch.org., Johnston CD; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA. johnston@fredhutch.org.

المصدر: Nature [Nature] 2024 Apr; Vol. 628 (8007), pp. 424-432. Date of Electronic Publication: 2024 Mar 20.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 0410462 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1476-4687 (Electronic) Linking ISSN: 00280836 NLM ISO Abbreviation: Nature Subsets: MEDLINE

مواضيع طبية MeSH: Colorectal Neoplasms*/microbiology , Colorectal Neoplasms*/pathology , Fusobacterium nucleatum*/classification , Fusobacterium nucleatum*/genetics , Fusobacterium nucleatum*/isolation & purification , Fusobacterium nucleatum*/pathogenicity, Animals ; Humans ; Mice ; Adenoma/microbiology ; Case-Control Studies ; Feces/microbiology ; Gastrointestinal Tract/metabolism ; Gastrointestinal Tract/microbiology ; Genome, Bacterial/genetics ; Mouth/microbiology ; Female

المؤلفون: Fogarty EC; Committee on Microbiology, University of Chicago, Chicago, IL 60637, USA; Duchossois Family Institute, University of Chicago, Chicago, IL 60637, USA; Department of Medicine, University of Chicago, Chicago, IL 60637, USA. Electronic address: efogarty@uchicago.edu., Schechter MS; Committee on Microbiology, University of Chicago, Chicago, IL 60637, USA; Duchossois Family Institute, University of Chicago, Chicago, IL 60637, USA; Department of Medicine, University of Chicago, Chicago, IL 60637, USA., Lolans K; Department of Medicine, University of Chicago, Chicago, IL 60637, USA., Sheahan ML; Duchossois Family Institute, University of Chicago, Chicago, IL 60637, USA; Department of Microbiology, University of Chicago, Chicago, IL 60637, USA., Veseli I; Department of Medicine, University of Chicago, Chicago, IL 60637, USA; Graduate Program in Biophysical Sciences, University of Chicago, Chicago, IL 60637, USA., Moore RM; Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA., Kiefl E; Department of Medicine, University of Chicago, Chicago, IL 60637, USA; Graduate Program in Biophysical Sciences, University of Chicago, Chicago, IL 60637, USA., Moody T; Department of Systems Biology, Columbia University, New York, NY 10032, USA., Rice PA; Committee on Microbiology, University of Chicago, Chicago, IL 60637, USA; Department of Biochemistry, University of Chicago, Chicago, IL 60637, USA., Yu MK; Toyota Technological Institute at Chicago, Chicago, IL 60637, USA., Mimee M; Committee on Microbiology, University of Chicago, Chicago, IL 60637, USA; Department of Microbiology, University of Chicago, Chicago, IL 60637, USA; Pritzker School of Molecular Engineering, The University of Chicago, Chicago, IL 60637, USA., Chang EB; Department of Medicine, University of Chicago, Chicago, IL 60637, USA., Ruscheweyh HJ; Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Zurich, Zurich 8093, Switzerland., Sunagawa S; Department of Biology, Institute of Microbiology and Swiss Institute of Bioinformatics, ETH Zurich, Zurich 8093, Switzerland., Mclellan SL; School of Freshwater Sciences, University of Wisconsin-Milwaukee, Milwaukee, WI 53204, USA., Willis AD; Department of Biostatistics, University of Washington, Seattle, WA 98195, USA., Comstock LE; Committee on Microbiology, University of Chicago, Chicago, IL 60637, USA; Duchossois Family Institute, University of Chicago, Chicago, IL 60637, USA; Department of Microbiology, University of Chicago, Chicago, IL 60637, USA. Electronic address: lecomstock@bsd.uchicago.edu., Eren AM; Department of Medicine, University of Chicago, Chicago, IL 60637, USA; Marine Biological Laboratory, Woods Hole, MA 02543, USA; Alfred Wegener Institute Helmholtz Centre for Polar and Marine Research, 27570 Bremerhaven, Germany; Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, 26129 Oldenburg, Germany; Max Planck Institute for Marine Microbiology, 28359 Bremen, Germany; Helmholtz Institute for Functional Marine Biodiversity, 26129 Oldenburg, Germany. Electronic address: meren@hifmb.de.

المصدر: Cell [Cell] 2024 Feb 29; Vol. 187 (5), pp. 1206-1222.e16.

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Cell Press Country of Publication: United States NLM ID: 0413066 Publication Model: Print Cited Medium: Internet ISSN: 1097-4172 (Electronic) Linking ISSN: 00928674 NLM ISO Abbreviation: Cell Subsets: MEDLINE

مواضيع طبية MeSH: Bacteria*/genetics , Metagenome* , Plasmids*/genetics , Gastrointestinal Tract*, Humans ; Bacteroidetes/genetics ; Feces/microbiology

المؤلفون: Kim M; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital; Department of Medicine, Harvard Medical School., Parrish RC 2nd; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital., Shah VS; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital., Ross M; Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine., Cormier J; Alkek Center for Metagenomics and Microbiome Research, Baylor College of Medicine., Baig A; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital; College of Science, Northeastern University., Huang CY; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital., Brenner L; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital; Department of Medicine, Harvard Medical School., Neuringer I; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital., Whiteson K; Department of Molecular Biology & Biochemistry, University of California., Harris JK; Department of Pediatrics, University of Colorado Anschutz Medical Campus., Willis AD; Department of Biostatistics, University of Washington School of Public Health., Lai PS; Division of Pulmonary and Critical Care Medicine, Massachusetts General Hospital; Department of Medicine, Harvard Medical School.

المصدر: Research square [Res Sq] 2024 Jan 23. Date of Electronic Publication: 2024 Jan 23.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101768035 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: Res Sq Subsets: PubMed not MEDLINE

المؤلفون: Trinh P; Department of Environmental & Occupational Health Sciences, University of Washington, Seattle, WA, USA., Clausen DS; Department of Biostatistics, University of Washington, Seattle, WA, USA., Willis AD; Department of Biostatistics, University of Washington, Seattle, WA, USA. adwillis@uw.edu.

المصدر: Genome biology [Genome Biol] 2023 Sep 29; Vol. 24 (1), pp. 214. Date of Electronic Publication: 2023 Sep 29.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural

بيانات الدورية: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE

مواضيع طبية MeSH: Metagenomics* , Microbiota*/genetics, Metagenome ; Computer Simulation ; Sequence Analysis, DNA

المؤلفون: Teichman S; Department of Statistics, University of Washington., Lee MD; NASA Ames Research Center and Blue Marble Space Institute of Science., Willis AD; Department of Biostatistics, University of Washington.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 Aug 16. Date of Electronic Publication: 2023 Aug 16.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Veseli I; Biophysical Sciences Program, The University of Chicago, Chicago, IL 60637, USA.; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA., Chen YT; Data Science Institute and Department of Biomedical Data Science, Stanford University, Stanford, CA, 94305, USA., Schechter MS; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.; Committee on Microbiology, The University of Chicago, Chicago, IL 60637, USA., Vanni C; MARUM Center for Marine Environmental Sciences, University of Bremen, Bremen, Germany., Fogarty EC; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.; Committee on Microbiology, The University of Chicago, Chicago, IL 60637, USA., Watson AR; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.; Committee on Microbiology, The University of Chicago, Chicago, IL 60637, USA., Jabri B; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA., Blekhman R; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA., Willis AD; Department of Biostatistics, University of Washington, Seattle, WA, 98195, USA., Yu MK; Toyota Technological Institute at Chicago, Chicago, IL 60605, USA., Fernàndez-Guerra A; Lundbeck Foundation GeoGenetics Centre, GLOBE Institute, University of Copenhagen, Copenhagen, Denmark., Füssel J; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.; Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany., Eren AM; Department of Medicine, The University of Chicago, Chicago, IL 60637, USA.; Institute for Chemistry and Biology of the Marine Environment, University of Oldenburg, Oldenburg, Germany.; Marine 'Omics Bridging Group, Max Planck Institute for Marine Microbiology, 28359 Bremen, Germany.; Alfred Wegener Institute for Polar and Marine Research, Bremerhaven, Germany.; Helmholtz Institute for Functional Marine Biodiversity, 26129, Oldenburg, Germany.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 May 26. Date of Electronic Publication: 2023 May 26.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE

المؤلفون: Trinh P; Department of Environmental & Occupational Health Sciences, University of Washington.; Department of Biostatistics, University of Washington., Roberts MC; Department of Environmental & Occupational Health Sciences, University of Washington., Rabinowitz PM; Department of Environmental & Occupational Health Sciences, University of Washington., Willis AD; Department of Biostatistics, University of Washington.

المصدر: BioRxiv : the preprint server for biology [bioRxiv] 2023 May 12. Date of Electronic Publication: 2023 May 12.

نوع المنشور: Preprint

بيانات الدورية: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE