المؤلفون: Alshammari, Maytha, He, Jing, Wriggers, Willy

المصدر: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) Bioinformatics and Biomedicine (BIBM), 2022 IEEE International Conference on. :3423-3430 Dec, 2022

Relation: 2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

المؤلفون: Afonine, PV, Grosse-Kunstleve, RW, Adams, PD, Urzhumtsev, A

المصدر: Acta Crystallographica Section D, Structural Biology. 79(7)

مصطلحات موضوعية: Chemical Sciences, Physical Chemistry, Phenix, anisotropy, bulk solvent, scaling, Physical Sciences, Biological Sciences, Biophysics, Biological sciences, Chemical sciences, Physical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/9vq2s602

المؤلفون: Afonine, Pavel V, Gobet, Alexia, Moissonnier, Loïck, Martin, Juliette, Poon, Billy K, Chaptal, Vincent

المصدر: Biochimica et Biophysica Acta (BBA) - Biomembranes. 1865(4)

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, Biotechnology, Cryoelectron Microscopy, Software, Proteins, Protein Conformation, Molecular Dynamics Simulation, Cryo-EM, Variability analysis, Structure modelling, Phenix, varref, Phenix.varref, Other Biological Sciences, Chemical Engineering, Biochemistry & Molecular Biology, Biophysics, Biochemistry and cell biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/93w2h5j6

المؤلفون: Oeffner, Robert D, Croll, Tristan I, Millán, Claudia, Poon, Billy K, Schlicksup, Christopher J, Read, Randy J, Terwilliger, Tom C

المصدر: Acta Crystallographica Section D, Structural Biology. 78(11)

مصطلحات موضوعية: 1.1 Normal biological development and functioning, Underpinning research, Models, Molecular, Software, Crystallography, X-Ray, Protein Conformation, Cryoelectron Microscopy, AlphaFold, Phenix, ISOLDE, process_predicted_model, confidence measures, Physical Sciences, Chemical Sciences, Biological Sciences, Biophysics

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/55z8s1x4

المؤلفون: Liebschner, Dorothee, Afonine, Pavel V, Moriarty, Nigel W, Poon, Billy K, Chen, Vincent B, Adams, Paul D

المصدر: Acta Crystallographica Section D, Structural Biology. 77(1)

مصطلحات موضوعية: Biological Sciences, Physical Sciences, Condensed Matter Physics, Cryoelectron Microscopy, Databases, Protein, Image Processing, Computer-Assisted, Macromolecular Substances, Models, Molecular, Molecular Conformation, Software, cryo-EM, Phenix, re-refinement, CERES, scientific web pages, Chemical Sciences, Biophysics, Biological sciences, Chemical sciences, Physical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4jv3f3nt

المؤلفون: Sobolev, Oleg V, Afonine, Pavel V, Moriarty, Nigel W, Hekkelman, Maarten L, Joosten, Robbie P, Perrakis, Anastassis, Adams, Paul D

المصدر: Structure. 28(11)

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, Algorithms, Bias, Cryoelectron Microscopy, Crystallography, X-Ray, Databases, Protein, Humans, Models, Molecular, Protein Conformation, alpha-Helical, Protein Conformation, beta-Strand, Proteins, Software, CCTBX, PDB-REDO, Phenix, Rama-Z, Ramachandran plot, Z score, cryo-EM, crystallography, validation, Chemical Sciences, Information and Computing Sciences, Biophysics, Biological sciences, Chemical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/69s849mv

المؤلفون: Moriarty, Nigel W, Janowski, Pawel A, Swails, Jason M, Nguyen, Hai, Richardson, Jane S, Case, David A, Adams, Paul D

المصدر: Acta Crystallographica Section D, Structural Biology. 76(1)

مصطلحات موضوعية: Inorganic Chemistry, Chemical Sciences, Bioengineering, Cryoelectron Microscopy, Crystallography, X-Ray, Databases, Protein, Hydrogen Bonding, Molecular Dynamics Simulation, Protein Conformation, Proteins, Software, Amber refinement target, hydrogen-bond quality, Amber in Phenix, C-beta deviations, peptide orientations, Cβ deviations, Physical Sciences, Biological Sciences, Biophysics, Biological sciences, Chemical sciences, Physical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/72z1r082

المؤلفون: Liebschner, Dorothee, Afonine, Pavel V, Baker, Matthew L, Bunkóczi, Gábor, Chen, Vincent B, Croll, Tristan I, Hintze, Bradley, Hung, Li Wei, Jain, Swati, McCoy, Airlie J, Moriarty, Nigel W, Oeffner, Robert D, Poon, Billy K, Prisant, Michael G, Read, Randy J, Richardson, Jane S, Richardson, David C, Sammito, Massimo D, Sobolev, Oleg V, Stockwell, Duncan H, Terwilliger, Thomas C, Urzhumtsev, Alexandre G, Videau, Lizbeth L, Williams, Christopher J, Adams, Paul D

المصدر: Acta crystallographica. Section D, Structural biology. 75(Pt 10)

مصطلحات موضوعية: Macromolecular Substances, Cryoelectron Microscopy, Crystallography, X-Ray, Molecular Conformation, Models, Molecular, Automation, Software Design, Software Validation, C++, Phenix, Python, X-rays, automation, cctbx, cryo-EM, diffraction, macromolecular crystallography, neutrons, C plus plus, Crystallography, X-Ray, Models, Molecular, Generic Health Relevance

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/4f55w41k

المؤلفون: Kim, Doo Nam, Moriarty, Nigel W, Kirmizialtin, Serdal, Afonine, Pavel V, Poon, Billy, Sobolev, Oleg V, Adams, Paul D, Sanbonmatsu, Karissa

المصدر: Journal of Structural Biology. 208(1)

مصطلحات موضوعية: Biochemistry and Cell Biology, Biological Sciences, Networking and Information Technology R&D (NITRD), Bioengineering, Generic health relevance, Cryoelectron Microscopy, Molecular Dynamics Simulation, Protein Conformation, Software, Cryo-EM, Molecular dynamics, Flexible fitting, Correlation coefficient, Phenix, Zoology, Biophysics, Biochemistry and cell biology

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/9vn7d3db

المؤلفون: Aidala, C, Akiba, Y, Alfred, M, Andrieux, V, Apadula, N, Asano, H, Azmoun, B, Babintsev, V, Bandara, NS, Barish, KN, Bathe, S, Bazilevsky, A, Beaumier, M, Belmont, R, Berdnikov, A, Berdnikov, Y, Blau, DS, Bok, JS, Brooks, ML, Bryslawskyj, J, Bumazhnov, V, Campbell, S, Roman, V Canoa, Cervantes, R, Y., C, Chiu, M, Choi, IJ, Choi, JB, Citron, Z, Connors, M, Cronin, N, Csanád, M, Csörgő, T, Danley, TW, Daugherity, MS, David, G, DeBlasio, K, Dehmelt, K, Denisov, A, Deshpande, A, Desmond, EJ, Dion, A, Dixit, D, H., J, Drees, A, Drees, KA, Durham, JM, Durum, A, Enokizono, A, En’yo, H, Esumi, S, Fadem, B, Fan, W, Feege, N, Fields, DE, Finger, M, Fokin, SL, Frantz, JE, Franz, A, Frawley, AD, Fukuda, Y, Gal, C, Gallus, P, Gamez, EA, Garg, P, Ge, H, Giordano, F, Goto, Y, Grau, N, Greene, SV, Perdekamp, M Grosse, Gunji, T, Guragain, H, Hachiya, T, Haggerty, JS, Hahn, KI, Hamagaki, H, Hamilton, HF, Han, SY, Hanks, J, Hasegawa, S, Haseler, TOS, He, X, Hemmick, TK, Hill, JC, Hill, K, Hodges, A, Hollis, RS, Homma, K, Hong, B, Hoshino, T, Hotvedt, N, Huang, J, Huang, S, Imai, K, Inaba, M, Iordanova, A, Isenhower, D, Ishimaru, S

المصدر: Physical Review Letters. 123(12)

مصطلحات موضوعية: Nuclear and Plasma Physics, Particle and High Energy Physics, Physical Sciences, PHENIX Collaboration, hep-ex, nucl-ex, Mathematical Sciences, Engineering, General Physics, Mathematical sciences, Physical sciences

وصف الملف: application/pdf

URL الوصول: https://escholarship.org/uc/item/0wx4g3kq
https://escholarship.org/content/qt0wx4g3kq/qt0wx4g3kq.pdf