المؤلفون: Van Tonder, AJ, Bray, JE, Jolley, KA, Van Rensburg, MJ, Quirk, SJ, Haraldsson, G, Maidens, MCJ, Bentley, SD, Haraldsson, A, Erlendsdottir, H, Kristinsson, KG, Brueggemann, AB

المساهمون: Heilbrigðisvísindasvið (HÍ), School of Health Sciences (UI), Háskóli Íslands, University of Iceland

مصطلحات موضوعية: SEROTYPE REPLACEMENT, VACCINE, CHILDREN, Core genome, accessory genome, Pan-genome, Microbiology, DISEASE, Next generation sequencing, Pneumókokkar, next generation sequencing, Örverufræði, Science & Technology, SEQUENCES, Accessory genome, Bacterial population structure, Pneumococcus, Genarannsóknir, core genome, CARRIAGE, Gerlar, pan-genome, Erfðarannsóknir, Life Sciences & Biomedicine, bacterial population structure, pneumococcus

URL الوصول: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::d6c3ec90724ff4830e38c2e0ad943399
https://hdl.handle.net/20.500.11815/2057

المؤلفون: Van Tonder, AJ, Mistry, S, Bray, JE, Hill, DMC, Cody, AJ, Farmer, CL, Klugman, KP, Von Gottberg, A, Bentley, SD, Parkhill, J, Jolley, KA, Maiden, MCJ, Brueggemann, AB

المصدر: PLoS Computational Biology, Vol 10, Iss 8, p e1003788 (2014)
PLoS Computational Biology

مصطلحات موضوعية: MECHANISM, Bacterial Diseases, Biochemistry & Molecular Biology, STRAIN, GENES, Bioinformatics, QH301-705.5, Microbial Genomics, Neisseria meningitidis, Microbiology, Biochemical Research Methods, Campylobacter jejuni, Bacterial Proteins, Databases, Genetic, ELEMENTS, Genetics, Medicine and Health Sciences, EPIDEMIOLOGY, Biology (General), 01 Mathematical Sciences, STAPHYLOCOCCUS-AUREUS, 08 Information And Computing Sciences, Science & Technology, Models, Genetic, PHYLOGENETIC NETWORKS, Biology and Life Sciences, Bacteriology, Bayes Theorem, Genomics, 06 Biological Sciences, PAN-GENOME, EVOLUTION, Infectious Diseases, Mathematical & Computational Biology, SPREAD, Life Sciences & Biomedicine, Genome, Bacterial, Research Article

URL الوصول: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::dad9e65f9e9335899be57676c8502bb8
https://doi.org/10.1371/journal.pcbi.1003788

المؤلفون: Bogaardt, C, Van Tonder, AJ, Brueggemann, AB

مصطلحات موضوعية: Bioinformatics, STREPTOCOCCUS-PNEUMONIAE, RECOMBINATION, IMMUNITY, DISEASE, Bacterial Proteins, Bacteriocins, Sequence Homology, Nucleic Acid, Genetics, PEPTIDE, Genetics & Heredity, Base Composition, 08 Information And Computing Sciences, Science & Technology, IDENTIFICATION, 11 Medical And Health Sciences, 06 Biological Sciences, COMPETENCE, Streptococcus pneumoniae, Biotechnology & Applied Microbiology, Multigene Family, VISUALIZATION, bacteria, SEROTYPE, Life Sciences & Biomedicine, Genome, Bacterial, GENETIC-TRANSFORMATION, Biotechnology

URL الوصول: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::eef1af69f4927e717fa47a8caf7f4a9a
https://ora.ox.ac.uk/objects/uuid:21417d8b-41c8-4350-b971-13894eceb9c0

المؤلفون: Ganaie FA; Division of Pulmonary/Allergy/Critical Care, Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA., Saad JS; Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA., Lo SW; Parasites and Microbes, Wellcome Sanger Institute, Cambridge, United Kingdom., McGee L; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA., van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom., Hawkins PA; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA; CDC Foundation, Atlanta, Georgia, USA., Calix JJ; Division of Pulmonary/Allergy/Critical Care, Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA; Division of Infectious Diseases, Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA., Bentley SD; Parasites and Microbes, Wellcome Sanger Institute, Cambridge, United Kingdom., Nahm MH; Division of Pulmonary/Allergy/Critical Care, Department of Medicine, University of Alabama at Birmingham, Birmingham, Alabama, USA. Electronic address: mnahm@uabmc.edu.

المصدر: The Journal of biological chemistry [J Biol Chem] 2023 Sep; Vol. 299 (9), pp. 105085. Date of Electronic Publication: 2023 Jul 24.

نوع المنشور: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Elsevier Inc. on behalf of American Society for Biochemistry and Molecular Biology Country of Publication: United States NLM ID: 2985121R Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1083-351X (Electronic) Linking ISSN: 00219258 NLM ISO Abbreviation: J Biol Chem Subsets: MEDLINE

مواضيع طبية MeSH: Pneumococcal Infections*/microbiology , Pneumococcal Infections*/prevention & control , Streptococcus pneumoniae*/genetics , Streptococcus pneumoniae*/immunology , Bacterial Capsules*/chemistry , Bacterial Capsules*/genetics , Genes, Bacterial*/genetics , Genes, Bacterial*/immunology , Transferases*/genetics , Transferases*/metabolism, Antibodies, Bacterial/immunology ; Pilot Projects ; Pneumococcal Vaccines/classification ; Pneumococcal Vaccines/immunology ; Polysaccharides/chemistry ; Serogroup ; Vaccines, Conjugate/classification ; Vaccines, Conjugate/immunology ; Gene Silencing

المؤلفون: Butler MEB; Imperial College London, London, UK., Jansen van Rensburg MJ; University of Oxford, Oxford, UK., Karani A; KEMRI Wellcome Trust Programme, Kilifi, Kenya., Mvera B; KEMRI Wellcome Trust Programme, Kilifi, Kenya., Akech D; KEMRI Wellcome Trust Programme, Kilifi, Kenya., Akter A; Imperial College London, London, UK., Forrest C; Imperial College London, London, UK., van Tonder AJ; University of Cambridge, Cambridge, UK., Quirk SJ; University of Iceland and Landspitali - The National University Hospital of Iceland, Reykjavík, Iceland., Haraldsson G; University of Iceland and Landspitali - The National University Hospital of Iceland, Reykjavík, Iceland., Bentley SD; Wellcome Sanger Institute, Hinxton, UK., Erlendsdóttir H; University of Iceland and Landspitali - The National University Hospital of Iceland, Reykjavík, Iceland., Haraldsson Á; University of Iceland and Children's Hospital Iceland, Landspitali, Reykjavík, Iceland., Kristinsson KG; University of Iceland and Landspitali - The National University Hospital of Iceland, Reykjavík, Iceland., Scott JAG; KEMRI Wellcome Trust Programme, Kilifi, Kenya.; London School of Hygiene and Tropical Medicine, London, UK., Brueggemann AB; Imperial College London, London, UK.; University of Oxford, Oxford, UK.

المصدر: Microbial genomics [Microb Genom] 2023 Jul; Vol. 9 (7).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE

مواضيع طبية MeSH: Bacteriocins* , Vaccines*, Streptococcus pneumoniae/genetics ; Kenya/epidemiology ; Prevalence ; Iceland/epidemiology

المؤلفون: Edao BM; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom.; College of Veterinary Medicine, Addis Ababa University, Bishoftu, Ethiopia., Ameni G; Aklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia.; Department of Veterinary Medicine, College of Food and Agriculture, United Arab Emirates University, Al Ain, United Arab Emirates., Berg S; Department of Bacteriology, Animal and Plant Health Agency, Weybridge, United Kingdom., Tekle M; College of Veterinary Medicine, Addis Ababa University, Bishoftu, Ethiopia., Whatmore AM; Department of Bacteriology, Animal and Plant Health Agency, Weybridge, United Kingdom., Wood JLN; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom., van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom., Ashford RT; Department of Bacteriology, Animal and Plant Health Agency, Weybridge, United Kingdom.

المصدر: Frontiers in microbiology [Front Microbiol] 2023 May 04; Vol. 14, pp. 1128966. Date of Electronic Publication: 2023 May 04 (Print Publication: 2023).

نوع المنشور: Journal Article

بيانات الدورية: Publisher: Frontiers Research Foundation Country of Publication: Switzerland NLM ID: 101548977 Publication Model: eCollection Cited Medium: Print ISSN: 1664-302X (Print) Linking ISSN: 1664302X NLM ISO Abbreviation: Front Microbiol Subsets: PubMed not MEDLINE

المؤلفون: van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., Ellis HC; Host Defence Unit, Department of Respiratory Medicine, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK.; National Heart and Lung Institute, Imperial College London, London, UK., Churchward CP; National Heart and Lung Institute, Imperial College London, London, UK., Kumar K; Host Defence Unit, Department of Respiratory Medicine, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK.; National Heart and Lung Institute, Imperial College London, London, UK., Ramadan N; Department of Microbiology, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK., Benson S; Department of Microbiology, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK., Parkhill J; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK jp369@cam.ac.uk., Moffatt MF; National Heart and Lung Institute, Imperial College London, London, UK.; These three authors contributed equally., Loebinger MR; Host Defence Unit, Department of Respiratory Medicine, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK.; National Heart and Lung Institute, Imperial College London, London, UK.; These three authors contributed equally., Cookson WOC; Host Defence Unit, Department of Respiratory Medicine, Royal Brompton Hospital, Guy's and St Thomas' NHS Foundation Trust, London, UK.; National Heart and Lung Institute, Imperial College London, London, UK.; These three authors contributed equally.

المصدر: The European respiratory journal [Eur Respir J] 2023 Apr 20; Vol. 61 (4). Date of Electronic Publication: 2023 Apr 20 (Print Publication: 2023).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: European Respiratory Society Country of Publication: England NLM ID: 8803460 Publication Model: Electronic-Print Cited Medium: Internet ISSN: 1399-3003 (Electronic) Linking ISSN: 09031936 NLM ISO Abbreviation: Eur Respir J Subsets: MEDLINE

مواضيع طبية MeSH: Mycobacterium Infections, Nontuberculous*/microbiology , Mycobacterium avium-intracellulare Infection*/epidemiology , Mycobacterium avium-intracellulare Infection*/complications , Cystic Fibrosis*/microbiology, Humans ; London/epidemiology ; Nontuberculous Mycobacteria/genetics ; Mycobacterium avium Complex/genetics ; Genomics

المؤلفون: Ganaie FA; Department of Medicine, Division of Pulmonary/Allergy/Critical Care, University of Alabama at Birmingham, Birmingham, Alabama, USA., Saad JS; Department of Microbiology, University of Alabama at Birmingham, Birmingham, Alabama, USA., Lo SW; Parasites and Microbes, Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom., McGee L; Respiratory Diseases Branch, Centers for Disease Control and Prevention, Atlanta, Georgia, USA., Bentley SD; Parasites and Microbes, Wellcome Sanger Institute, Hinxton, Cambridge, United Kingdom., van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, United Kingdom., Hawkins P; Hubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, Georgia, USA., Keenan JD; Department of Ophthalmology, University of California, San Francisco, California, USA., Calix JJ; Department of Medicine, Division of Pulmonary/Allergy/Critical Care, University of Alabama at Birmingham, Birmingham, Alabama, USA.; Department of Medicine, Division of Infectious Diseases, University of Alabama at Birmingham, Birmingham, Alabama, USA., Nahm MH; Department of Medicine, Division of Pulmonary/Allergy/Critical Care, University of Alabama at Birmingham, Birmingham, Alabama, USA.

المصدر: Journal of clinical microbiology [J Clin Microbiol] 2023 Apr 20; Vol. 61 (4), pp. e0002423. Date of Electronic Publication: 2023 Mar 27.

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.

بيانات الدورية: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7505564 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-660X (Electronic) Linking ISSN: 00951137 NLM ISO Abbreviation: J Clin Microbiol Subsets: MEDLINE

مواضيع طبية MeSH: Streptococcus pneumoniae* , Pneumococcal Infections*, Humans ; Serogroup ; Reproducibility of Results ; Serotyping ; Polysaccharides ; Pneumococcal Vaccines ; Bacterial Capsules/chemistry

المؤلفون: van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., McCullagh F; Cottenham Village College, Cottenham, UK., McKeand H; Cottenham Village College, Cottenham, UK., Thaw S; St Bede's Inter-Church School, Cambridge, UK., Bellis K; Wellcome Sanger Institute, Hinxton, UK.; Department of Medicine, University of Cambridge, Cambridge, UK., Raisen C; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., Lay L; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., Aggarwal D; Wellcome Sanger Institute, Hinxton, UK.; Department of Medicine, University of Cambridge, Cambridge, UK., Holmes M; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., Parkhill J; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., Harrison EM; Wellcome Sanger Institute, Hinxton, UK.; Department of Medicine, University of Cambridge, Cambridge, UK.; Department of Public Health and Primary Care, University of Cambridge, Cambridge, UK., Kucharski A; Centre for Mathematical Modelling of Infectious Diseases, London School of Hygiene and Tropical Medicine, London, UK., Conlan A; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK.

المصدر: Microbial genomics [Microb Genom] 2023 Apr; Vol. 9 (4).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE

مواضيع طبية MeSH: Citizen Science* , Staphylococcal Infections*/microbiology, Child ; Humans ; Staphylococcus aureus/genetics ; Schools ; England

المؤلفون: Hadjirin NF; Department of Medicine, University of Cambridge, Box 157, Addenbrooke's Hospital, Hills Rd, Cambridge, CB2 0QQ, UK.; Nuffield Department of Population Health, University of Oxford, Oxford OX3 7LF, UK., van Tonder AJ; Department of Veterinary Medicine, University of Cambridge, Madingley Rd, Cambridge, CB3 0ES, UK., Blane B; Department of Medicine, University of Cambridge, Box 157, Addenbrooke's Hospital, Hills Rd, Cambridge, CB2 0QQ, UK., Lees JA; MRC Centre for Global Infectious Disease Analysis, School of Public Health, Imperial College London, London, UK., Kumar N; Wellcome Trust Sanger Institute Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK., Delappe N; National CPE Reference Laboratory, University Hospital Galway, Galway, Ireland., Brennan W; National CPE Reference Laboratory, University Hospital Galway, Galway, Ireland., McGrath E; National CPE Reference Laboratory, University Hospital Galway, Galway, Ireland., Parkhill J; Department of Veterinary Medicine, University of Cambridge, Madingley Rd, Cambridge, CB3 0ES, UK., Cormican M; National CPE Reference Laboratory, University Hospital Galway, Galway, Ireland.; Antimicrobial Resistance and Microbial Ecology Group, School of Medicine, University of Galway, Galway, Ireland., Peacock SJ; Department of Medicine, University of Cambridge, Box 157, Addenbrooke's Hospital, Hills Rd, Cambridge, CB2 0QQ, UK., Ludden C; Department of Medicine, University of Cambridge, Box 157, Addenbrooke's Hospital, Hills Rd, Cambridge, CB2 0QQ, UK.; Wellcome Trust Sanger Institute Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London WC1E 7HT, UK.

المصدر: Microbial genomics [Microb Genom] 2023 Mar; Vol. 9 (3).

نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't

بيانات الدورية: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE

مواضيع طبية MeSH: Escherichia coli*/genetics , Klebsiella pneumoniae*/genetics, Ireland/epidemiology ; Retrospective Studies ; Genomics