Ensembl 2016.

التفاصيل البيبلوغرافية
العنوان:	Ensembl 2016.
المؤلفون:	Yates A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Akanni W; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Amode MR; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Barrell D; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK., Billis K; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Carvalho-Silva D; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Cummins C; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Clapham P; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK., Fitzgerald S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Gil L; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Girón CG; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Gordon L; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Hourlier T; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Hunt SE; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Janacek SH; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Johnson N; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Juettemann T; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Keenan S; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Lavidas I; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Martin FJ; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Maurel T; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., McLaren W; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Murphy DN; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Nag R; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Nuhn M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Parker A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Patricio M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Pignatelli M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Rahtz M; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK., Riat HS; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Sheppard D; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Taylor K; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Thormann A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Vullo A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Wilder SP; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Zadissa A; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Birney E; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Harrow J; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK., Muffato M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Perry E; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Ruffier M; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Spudich G; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Trevanion SJ; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Cunningham F; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Aken BL; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Zerbino DR; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK., Flicek P; European Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, CB10 1SA, UK flicek@ebi.ac.uk.
المصدر:	Nucleic acids research [Nucleic Acids Res] 2016 Jan 04; Vol. 44 (D1), pp. D710-6. Date of Electronic Publication: 2015 Dec 19.
نوع المنشور:	Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
اللغة:	English
بيانات الدورية:	Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE
أسماء مطبوعة:	Publication: 1992- : Oxford : Oxford University Press Original Publication: London, Information Retrieval ltd.
مواضيع طبية MeSH:	Databases, Genetic* , Genomics* , Molecular Sequence Annotation*, Animals ; Genes ; Genetic Variation ; Humans ; Internet ; Mice ; Proteins/genetics ; Rats ; Regulatory Sequences, Nucleic Acid ; Software
مستخلص:	The Ensembl project (http://www.ensembl.org) is a system for genome annotation, analysis, storage and dissemination designed to facilitate the access of genomic annotation from chordates and key model organisms. It provides access to data from 87 species across our main and early access Pre! websites. This year we introduced three newly annotated species and released numerous updates across our supported species with a concentration on data for the latest genome assemblies of human, mouse, zebrafish and rat. We also provided two data updates for the previous human assembly, GRCh37, through a dedicated website (http://grch37.ensembl.org). Our tools, in particular the VEP, have been improved significantly through integration of additional third party data. REST is now capable of larger-scale analysis and our regulatory data BioMart can deliver faster results. The website is now capable of displaying long-range interactions such as those found in cis-regulated datasets. Finally we have launched a website optimized for mobile devices providing views of genes, variants and phenotypes. Our data is made available without restriction and all code is available from our GitHub organization site (http://github.com/Ensembl) under an Apache 2.0 license. (© The Author(s) 2015. Published by Oxford University Press on behalf of Nucleic Acids Research.)
References:	Nucleic Acids Res. 2015 Jan;43(Database issue):D805-11. (PMID: 25355519) Nucleic Acids Res. 2003 Jul 1;31(13):3812-4. (PMID: 12824425) Nat Genet. 2015 Jun;47(6):598-606. (PMID: 25938943) Bioinformatics. 2015 Jan 1;31(1):143-5. (PMID: 25236461) Nat Methods. 2013 May;10(5):375-6. (PMID: 23629413) Nucleic Acids Res. 2015 Jul 1;43(W1):W455-9. (PMID: 25990727) Nucleic Acids Res. 2013 Jan;41(Database issue):D377-86. (PMID: 23193289) BMC Genomics. 2015;16 Suppl 8:S2. (PMID: 26110515) Nature. 2012 Sep 6;489(7414):57-74. (PMID: 22955616) PLoS Biol. 2011 Jul;9(7):e1001091. (PMID: 21750661) Bioinformatics. 2011 Aug 1;27(15):2156-8. (PMID: 21653522) Nucleic Acids Res. 2015 Jan;43(Database issue):D743-50. (PMID: 25355511) Bioinformatics. 2010 Aug 15;26(16):2069-70. (PMID: 20562413) Genome Biol. 2015 Mar 24;16:56. (PMID: 25887522) Database (Oxford). 2011 Jul 23;2011:bar030. (PMID: 21785142) Nat Protoc. 2009;4(8):1184-91. (PMID: 19617889) Nucleic Acids Res. 2006 Jan 1;34(Database issue):D599-601. (PMID: 16381939) Hum Mutat. 2013 Sep;34(9):E2393-402. (PMID: 23843252) Nucleic Acids Res. 2006 Jan 1;34(Database issue):D581-5. (PMID: 16381936) Nature. 2012 Nov 1;491(7422):56-65. (PMID: 23128226) Bioinformatics. 2010 Sep 1;26(17):2204-7. (PMID: 20639541) Nucleic Acids Res. 2001 Jan 1;29(1):308-11. (PMID: 11125122) Nucleic Acids Res. 2014 Jan;42(Database issue):D926-32. (PMID: 24304889) Bioinformatics. 2014 Apr 1;30(7):1003-5. (PMID: 24227676) Nucleic Acids Res. 2015 Jan;43(Database issue):D789-98. (PMID: 25428349) Genome Biol. 2015 Jan 05;16:22. (PMID: 25723102) Nucleic Acids Res. 2015 Jan;43(Database issue):D670-81. (PMID: 25428374) Nucleic Acids Res. 2014 Jan;42(Database issue):D191-8. (PMID: 24253303) Genome Res. 2009 Jul;19(7):1316-23. (PMID: 19498102) Nucleic Acids Res. 2014 Jan;42(Database issue):D756-63. (PMID: 24259432) Nature. 2015 Feb 19;518(7539):317-30. (PMID: 25693563) BMC Bioinformatics. 2010 May 11;11:240. (PMID: 20459813) Genome Res. 2008 Nov;18(11):1814-28. (PMID: 18849524) Nucleic Acids Res. 2013 Jan;41(Database issue):D871-9. (PMID: 23180796) Nat Genet. 2013 Jun;45(6):580-5. (PMID: 23715323) Nucleic Acids Res. 2008 Jan;36(Database issue):D735-40. (PMID: 18056084) Genome Res. 2012 Sep;22(9):1760-74. (PMID: 22955987) Hum Mutat. 2003 Jun;21(6):577-81. (PMID: 12754702) Bioinformatics. 2014 Nov 1;30(21):2993-8. (PMID: 25064571) Nucleic Acids Res. 2008 Jan;36(Database issue):D753-60. (PMID: 18003653) Nucleic Acids Res. 2014 Jan;42(Database issue):D546-52. (PMID: 24163254) Nucleic Acids Res. 2014 Jan;42(Database issue):D980-5. (PMID: 24234437) Bioinformatics. 2009 Aug 15;25(16):2078-9. (PMID: 19505943) Science. 2012 Jul 6;337(6090):64-9. (PMID: 22604720) Bioinformatics. 2014 Apr 1;30(7):1006-7. (PMID: 24351709) Nucleic Acids Res. 2014 Jan;42(Database issue):D1001-6. (PMID: 24316577) Curr Protoc Hum Genet. 2013 Jan;Chapter 7:Unit7.20. (PMID: 23315928)
معلومات مُعتمدة:	BB/M018458/1 United Kingdom Biotechnology and Biological Sciences Research Council; BB/I025506/1 United Kingdom Biotechnology and Biological Sciences Research Council; BB/K009524/1 United Kingdom Biotechnology and Biological Sciences Research Council; WT098051 United Kingdom Wellcome Trust; U41 HG007234 United States HG NHGRI NIH HHS; 095908 United Kingdom Wellcome Trust; BB/I025360/2 United Kingdom Biotechnology and Biological Sciences Research Council; U41HG007823 United States HG NHGRI NIH HHS; BB/M020398/1 United Kingdom Biotechnology and Biological Sciences Research Council; 1R01HD074078 United States HD NICHD NIH HHS; U41HG007234 United States HG NHGRI NIH HHS
المشرفين على المادة:	0 (Proteins)
تواريخ الأحداث:	Date Created: 20151222 Date Completed: 20160815 Latest Revision: 20231104
رمز التحديث:	20231215
مُعرف محوري في PubMed:	PMC4702834
DOI:	10.1093/nar/gkv1157
PMID:	26687719
قاعدة البيانات:	MEDLINE

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تدمد:	1362-4962
DOI:	10.1093/nar/gkv1157