دورية أكاديمية
Qiita: rapid, web-enabled microbiome meta-analysis.
| العنوان: | Qiita: rapid, web-enabled microbiome meta-analysis. |
|---|---|
| المؤلفون: | Gonzalez A; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Navas-Molina JA; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA.; Google LLC, Mountain View, CA, USA., Kosciolek T; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., McDonald D; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Vázquez-Baeza Y; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Ackermann G; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., DeReus J; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Janssen S; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Swafford AD; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA., Orchanian SB; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA., Sanders JG; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA., Shorenstein J; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA.; Inscripta, Inc., Boulder, CO, USA., Holste H; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA., Petrus S; Department of Biology, University of California, San Diego, La Jolla, CA, USA., Robbins-Pianka A; Department of Computer Science, University of Colorado, Boulder, Boulder, CO, USA., Brislawn CJ; Earth & Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, USA., Wang M; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Rideout JR; Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA., Bolyen E; Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA., Dillon M; Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA., Caporaso JG; Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, AZ, USA.; Department of Biological Sciences, Northern Arizona University, Flagstaff, AZ, USA., Dorrestein PC; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA.; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California, San Diego, La Jolla, CA, USA., Knight R; Department of Pediatrics, School of Medicine, University of California, San Diego, La Jolla, CA, USA. robknight@ucsd.edu.; Department of Computer Science and Engineering, University of California, San Diego, La Jolla, CA, USA. robknight@ucsd.edu.; Center for Microbiome Innovation, University of California, San Diego, La Jolla, CA, USA. robknight@ucsd.edu. |
| المصدر: | Nature methods [Nat Methods] 2018 Oct; Vol. 15 (10), pp. 796-798. Date of Electronic Publication: 2018 Oct 01. |
| نوع المنشور: | Journal Article; Meta-Analysis; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S. |
| اللغة: | English |
| بيانات الدورية: | Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE |
| أسماء مطبوعة: | Original Publication: New York, NY : Nature Pub. Group, c2004- |
| مواضيع طبية MeSH: | Internet* , Metagenomics* , Microbiota* , Software*, Computational Biology/*methods, Humans ; User-Computer Interface |
| مستخلص: | Multi-omic insights into microbiome function and composition typically advance one study at a time. However, in order for relationships across studies to be fully understood, data must be aggregated into meta-analyses. This makes it possible to generate new hypotheses by finding features that are reproducible across biospecimens and data layers. Qiita dramatically accelerates such integration tasks in a web-based microbiome-comparison platform, which we demonstrate with Human Microbiome Project and Integrative Human Microbiome Project (iHMP) data. |
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| معلومات مُعتمدة: | P01 DK078669 United States DK NIDDK NIH HHS; R01 MD011389 United States MD NIMHD NIH HHS; R01 HG004872 United States HG NHGRI NIH HHS; R01 HL140976 United States HL NHLBI NIH HHS; P30 MH062512 United States MH NIMH NIH HHS |
| تواريخ الأحداث: | Date Created: 20181003 Date Completed: 20190513 Latest Revision: 20211009 |
| رمز التحديث: | 20240628 |
| مُعرف محوري في PubMed: | PMC6235622 |
| DOI: | 10.1038/s41592-018-0141-9 |
| PMID: | 30275573 |
| قاعدة البيانات: | MEDLINE |
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