دورية أكاديمية

Optogenetic control shows that kinetic proofreading regulates the activity of the T cell receptor.

التفاصيل البيبلوغرافية
العنوان: Optogenetic control shows that kinetic proofreading regulates the activity of the T cell receptor.
المؤلفون: Yousefi OS; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany.; Spemann Graduate School of Biology and Medicine, University of Freiburg, Freiburg, Germany., Günther M; Division of Theoretical Systems Biology, German Cancer Research Center, Heidelberg, Germany.; BioQuant Center, University of Heidelberg, Heidelberg, Germany., Hörner M; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany., Chalupsky J; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany.; Center for Chronic Immunodeficiency, Medical Center Freiburg and Faculty of Medicine, University of Freiburg, Freiburg, Germany., Wess M; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany., Brandl SM; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany., Smith RW; Laboratory of Systems and Synthetic Biology, Wageningen University and Research, Wageningen, Netherlands., Fleck C; Laboratory of Systems and Synthetic Biology, Wageningen University and Research, Wageningen, Netherlands., Kunkel T; Faculty of Biology, University of Freiburg, Freiburg, Germany., Zurbriggen MD; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany.; Institute of Synthetic Biology and Cluster of Excellence on Plant Sciences, University of Düsseldorf, Düsseldorf, Germany., Höfer T; Division of Theoretical Systems Biology, German Cancer Research Center, Heidelberg, Germany.; BioQuant Center, University of Heidelberg, Heidelberg, Germany., Weber W; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany., Schamel WW; Signalling Research Centres BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.; Faculty of Biology, University of Freiburg, Freiburg, Germany.; Laboratory of Systems and Synthetic Biology, Wageningen University and Research, Wageningen, Netherlands.
المصدر: ELife [Elife] 2019 Apr 05; Vol. 8. Date of Electronic Publication: 2019 Apr 05.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Cambridge, UK : eLife Sciences Publications, Ltd., 2012-
مواضيع طبية MeSH: Signal Transduction*, Antigens/*metabolism , Phytochrome B/*metabolism , Receptors, Antigen, T-Cell/*metabolism , T-Lymphocytes/*immunology, Humans ; Jurkat Cells ; Kinetics ; Light ; Models, Theoretical ; Optogenetics/methods ; Protein Binding
مستخلص: The immune system distinguishes between self and foreign antigens. The kinetic proofreading (KPR) model proposes that T cells discriminate self from foreign ligands by the different ligand binding half-lives to the T cell receptor (TCR). It is challenging to test KPR as the available experimental systems fall short of only altering the binding half-lives and keeping other parameters of the interaction unchanged. We engineered an optogenetic system using the plant photoreceptor phytochrome B (PhyB) as a ligand to selectively control the dynamics of ligand binding to the TCR by light. This opto-ligand-TCR system was combined with the unique property of PhyB to continuously cycle between the binding and non-binding states under red light, with the light intensity determining the cycling rate and thus the binding duration. Mathematical modeling of our experimental datasets showed that indeed the ligand-TCR interaction half-life is the decisive factor for activating downstream TCR signaling, substantiating KPR.
Competing Interests: OY, MG, MH, JC, MW, SB, RS, CF, TK, MZ, TH, WW, WS No competing interests declared
(© 2019, Yousefi et al.)
References: Immunity. 2003 Feb;18(2):255-64. (PMID: 12594952)
ACS Synth Biol. 2018 Jul 20;7(7):1825-1828. (PMID: 29913065)
Proc Natl Acad Sci U S A. 2016 Oct 25;113(43):E6630-E6638. (PMID: 27702900)
Cell Rep. 2014 Jun 12;7(5):1704-1715. (PMID: 24857663)
Immunity. 1999 Mar;10(3):367-76. (PMID: 10204492)
Nat Immunol. 2014 Sep;15(9):798-807. (PMID: 25137454)
Mol Cell Biol. 1993 Sep;13(9):5771-80. (PMID: 7689151)
Immunity. 2007 Jan;26(1):43-54. (PMID: 17188005)
Cell. 2002 Jun 28;109(7):901-12. (PMID: 12110186)
Proc Natl Acad Sci U S A. 2010 May 11;107(19):8724-9. (PMID: 20421471)
Nucleic Acids Res. 2013 Apr;41(7):e77. (PMID: 23355611)
Cell. 2014 Apr 10;157(2):357-368. (PMID: 24725404)
Trends Biochem Sci. 2018 Feb;43(2):108-123. (PMID: 29269020)
Mol Cell. 2003 Dec;12(6):1367-78. (PMID: 14690592)
Proc Natl Acad Sci U S A. 1996 Feb 20;93(4):1401-5. (PMID: 8643643)
Science. 1996 Oct 4;274(5284):94-6. (PMID: 8810254)
Sci Signal. 2019 Jan 15;12(564):. (PMID: 30647147)
Nat Commun. 2015 Jul 09;6:7670. (PMID: 26158227)
Nature. 2006 Dec 7;444(7120):724-9. (PMID: 17086201)
Nature. 2009 Oct 15;461(7266):997-1001. (PMID: 19749742)
Annu Rev Immunol. 2005;23:101-25. (PMID: 15771567)
Immunity. 2007 Jul;27(1):76-88. (PMID: 17629516)
Nat Rev Mol Cell Biol. 2014 Aug;15(8):551-8. (PMID: 25027655)
J Exp Med. 1992 Jun 1;175(6):1493-9. (PMID: 1588277)
Curr Opin Biotechnol. 2018 Aug;52:42-48. (PMID: 29505976)
Elife. 2019 Apr 05;8:. (PMID: 30947808)
Annu Rev Plant Biol. 2006;57:837-58. (PMID: 16669784)
Immunity. 1998 Oct;9(4):459-66. (PMID: 9806632)
Nat Immunol. 2006 Aug;7(8):803-9. (PMID: 16855606)
J Exp Med. 1984 May 1;159(5):1397-412. (PMID: 6232337)
Nat Immunol. 2001 Mar;2(3):229-34. (PMID: 11224522)
Nat Rev Immunol. 2004 Apr;4(4):301-8. (PMID: 15057788)
Nature. 2002 Oct 24;419(6909):845-9. (PMID: 12397360)
Immunity. 1998 Dec;9(6):817-26. (PMID: 9881972)
J Exp Med. 1997 Jan 20;185(2):219-29. (PMID: 9016871)
J Biol Chem. 2009 Nov 6;284(45):31028-37. (PMID: 19755427)
Immunity. 2010 Feb 26;32(2):163-74. (PMID: 20137987)
PLoS Biol. 2005 Nov;3(11):e356. (PMID: 16231973)
Immunity. 2000 Mar;12(3):241-50. (PMID: 10755611)
Annu Rev Plant Biol. 2008;59:281-311. (PMID: 18257712)
Cell. 2013 Dec 5;155(6):1422-34. (PMID: 24315106)
Acta Biomater. 2018 Oct 1;79:276-282. (PMID: 30165200)
Cell. 2017 Feb 9;168(4):724-740. (PMID: 28187291)
Biophys J. 2001 Nov;81(5):2547-57. (PMID: 11606269)
Proc Natl Acad Sci U S A. 1995 May 23;92(11):5042-6. (PMID: 7761445)
Science. 1995 Jan 27;267(5197):515-8. (PMID: 7824949)
EMBO J. 2000 Nov 1;19(21):5611-24. (PMID: 11060013)
Proc Natl Acad Sci U S A. 2008 Oct 7;105(40):15229-34. (PMID: 18832155)
Cell. 2014 Oct 9;159(2):333-45. (PMID: 25284152)
ACS Synth Biol. 2015 Sep 18;4(9):951-8. (PMID: 25803699)
Proc Natl Acad Sci U S A. 1974 Oct;71(10):4135-9. (PMID: 4530290)
J Immunol. 2017 Jan 1;198(1):47-52. (PMID: 27994168)
Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14709-14. (PMID: 18799745)
Curr Opin Biotechnol. 2012 Oct;23(5):780-4. (PMID: 22326912)
Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16916-21. (PMID: 20837541)
Trends Biochem Sci. 2008 Feb;33(2):51-7. (PMID: 18201888)
Commun Biol. 2019 Jan 8;2:15. (PMID: 30652127)
Immunol Rev. 2003 Feb;191:38-46. (PMID: 12614350)
Immunity. 2011 Nov 23;35(5):681-93. (PMID: 22101157)
Protein Sci. 1999 Apr;8(4):921-9. (PMID: 10211839)
Annu Rev Immunol. 1998;16:523-44. (PMID: 9597140)
Proc Natl Acad Sci U S A. 2006 Jun 20;103(25):9625-30. (PMID: 16766661)
Curr Opin Immunol. 2016 Aug;41:68-76. (PMID: 27372731)
Adv Sci (Weinh). 2018 Jun 17;5(8):1800446. (PMID: 30128251)
Nat Immunol. 2004 May;5(5):524-30. (PMID: 15048111)
Immunity. 1994 Apr;1(1):15-22. (PMID: 7889394)
J Exp Med. 1998 Nov 16;188(10):1867-74. (PMID: 9815264)
Immunity. 2016 May 17;44(5):1091-101. (PMID: 27192576)
Sci Signal. 2011 Jun 07;4(176):ra39. (PMID: 21653229)
Photochem Photobiol. 2017 Nov;93(6):1525-1531. (PMID: 28503745)
Cell. 1988 Oct 21;55(2):301-8. (PMID: 3262426)
Plant Cell. 2004 Nov;16(11):3033-44. (PMID: 15486100)
Nucleic Acids Res. 2013 Jul;41(12):e124. (PMID: 23625964)
J Exp Med. 1984 Nov 1;160(5):1284-99. (PMID: 6208306)
Cell. 2017 Mar 23;169(1):108-119.e20. (PMID: 28340336)
Nat Methods. 2009 May;6(5):343-5. (PMID: 19363495)
ACS Synth Biol. 2017 Jul 21;6(7):1248-1256. (PMID: 28340532)
Sci Signal. 2009 Aug 11;2(83):ra43. (PMID: 19671929)
J Immunol. 2011 Dec 15;187(12):6281-90. (PMID: 22102724)
Nat Methods. 2016 Sep;13(9):755-8. (PMID: 27427858)
BMC Syst Biol. 2016 Nov 25;10(1):110. (PMID: 27884151)
معلومات مُعتمدة: EXC2189 International Deutsche Forschungsgemeinschaft; GSC-4 International Deutsche Forschungsgemeinschaft; EXC294 International Deutsche Forschungsgemeinschaft; EXC81 International Deutsche Forschungsgemeinschaft; INST 39/899-1 FUGG International Deutsche Forschungsgemeinschaft
فهرسة مساهمة: Keywords: A. thaliana; T cells; dynamics; human; immunology; inflammation; ligand-receptor; optogenetics; signaling
المشرفين على المادة: 0 (Antigens)
0 (Receptors, Antigen, T-Cell)
136250-22-1 (Phytochrome B)
تواريخ الأحداث: Date Created: 20190406 Date Completed: 20200228 Latest Revision: 20200309
رمز التحديث: 20240628
مُعرف محوري في PubMed: PMC6488296
DOI: 10.7554/eLife.42475
PMID: 30947807
قاعدة البيانات: MEDLINE