دورية أكاديمية

A framework for evaluating correspondence between brain images using anatomical fiducials.

التفاصيل البيبلوغرافية
العنوان: A framework for evaluating correspondence between brain images using anatomical fiducials.
المؤلفون: Lau JC; Department of Clinical Neurological Sciences, Division of Neurosurgery, Western University, London, Ontario, Canada.; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; School of Biomedical Engineering, Western University, London, Ontario, Canada., Parrent AG; Department of Clinical Neurological Sciences, Division of Neurosurgery, Western University, London, Ontario, Canada., Demarco J; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada., Gupta G; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada., Kai J; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; Department of Medical Biophysics, Western University, London, Ontario, Canada., Stanley OW; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; Department of Medical Biophysics, Western University, London, Ontario, Canada., Kuehn T; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; School of Biomedical Engineering, Western University, London, Ontario, Canada., Park PJ; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada., Ferko K; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; Brain and Mind Institute, Western University, London, Ontario, Canada.; Graduate Program in Neuroscience, Western University, London, Ontario, Canada., Khan AR; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; School of Biomedical Engineering, Western University, London, Ontario, Canada.; Department of Medical Biophysics, Western University, London, Ontario, Canada.; Brain and Mind Institute, Western University, London, Ontario, Canada.; Graduate Program in Neuroscience, Western University, London, Ontario, Canada., Peters TM; Imaging Research Laboratories, Robarts Research Institute, Western University, London, Ontario, Canada.; Centre for Functional and Metabolic Mapping, Robarts Research Institute, Western University, London, Ontario, Canada.; School of Biomedical Engineering, Western University, London, Ontario, Canada.; Department of Medical Biophysics, Western University, London, Ontario, Canada.; Brain and Mind Institute, Western University, London, Ontario, Canada.
المصدر: Human brain mapping [Hum Brain Mapp] 2019 Oct 01; Vol. 40 (14), pp. 4163-4179. Date of Electronic Publication: 2019 Jun 07.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Wiley Country of Publication: United States NLM ID: 9419065 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1097-0193 (Electronic) Linking ISSN: 10659471 NLM ISO Abbreviation: Hum Brain Mapp Subsets: MEDLINE
أسماء مطبوعة: Publication: New York : Wiley
Original Publication: New York : Wiley-Liss, c1993-
مواضيع طبية MeSH: Fiducial Markers*, Brain/*anatomy & histology , Image Processing, Computer-Assisted/*methods , Magnetic Resonance Imaging/*methods , Neuroimaging/*methods, Humans
مستخلص: Accurate spatial correspondence between template and subject images is a crucial step in neuroimaging studies and clinical applications like stereotactic neurosurgery. In the absence of a robust quantitative approach, we sought to propose and validate a set of point landmarks, anatomical fiducials (AFIDs), that could be quickly, accurately, and reliably placed on magnetic resonance images of the human brain. Using several publicly available brain templates and individual participant datasets, novice users could be trained to place a set of 32 AFIDs with millimetric accuracy. Furthermore, the utility of the AFIDs protocol is demonstrated for evaluating subject-to-template and template-to-template registration. Specifically, we found that commonly used voxel overlap metrics were relatively insensitive to focal misregistrations compared to AFID point-based measures. Our entire protocol and study framework leverages open resources and tools, and has been developed with full transparency in mind so that others may freely use, adopt, and modify. This protocol holds value for a broad number of applications including alignment of brain images and teaching neuroanatomy.
(© 2019 Wiley Periodicals, Inc.)
References: Data Brief. 2017 Apr 15;12:370-379. (PMID: 28491942)
Ann Surg. 1918 Jul;68(1):5-11. (PMID: 17863946)
Nat Methods. 2019 Jan;16(1):111-116. (PMID: 30532080)
Front Neuroinform. 2015 Apr 10;9:8. (PMID: 25914639)
Med Image Anal. 1997 Apr;1(3):225-43. (PMID: 9873908)
Neuroimage. 1999 Feb;9(2):179-94. (PMID: 9931268)
Med Image Anal. 2011 Aug;15(4):529-50. (PMID: 21441062)
Cereb Cortex. 2004 Jan;14(1):11-22. (PMID: 14654453)
J Cogn Neurosci. 2010 Dec;22(12):2677-84. (PMID: 19929323)
Science. 2013 Jun 21;340(6139):1472-5. (PMID: 23788795)
Med Image Anal. 2008 Feb;12(1):26-41. (PMID: 17659998)
J Neurosci. 1996 Jul 1;16(13):4261-74. (PMID: 8753887)
Neuroimage. 2012 Aug 15;62(2):774-81. (PMID: 22248573)
Hum Brain Mapp. 2009 Nov;30(11):3574-95. (PMID: 19387981)
IEEE Trans Med Imaging. 1998 Oct;17(5):694-702. (PMID: 9874293)
Nat Rev Neurosci. 2002 Mar;3(3):243-9. (PMID: 11994756)
Neuroimage. 2011 Jan 1;54(1):313-27. (PMID: 20656036)
IEEE Trans Med Imaging. 2003 Sep;22(9):1120-30. (PMID: 12956267)
IEEE J Biomed Health Inform. 2015 Jul;19(4):1362-74. (PMID: 25955855)
Neuroimage. 2019 Jan 1;184:586-598. (PMID: 30267856)
IEEE Trans Med Imaging. 2001 Sep;20(9):917-27. (PMID: 11585208)
Neuroimage. 2012 Aug 15;62(2):911-22. (PMID: 22248580)
Magn Reson Imaging. 2012 Nov;30(9):1323-41. (PMID: 22770690)
Phys Med Biol. 2006 Jul 21;51(14):R505-40. (PMID: 16825730)
Neuroimage. 1992 Aug;1(1):43-53. (PMID: 9343556)
PLoS Comput Biol. 2017 Mar 9;13(3):e1005209. (PMID: 28278228)
J Comput Assist Tomogr. 1994 Mar-Apr;18(2):192-205. (PMID: 8126267)
Sci Data. 2016 Jun 21;3:160044. (PMID: 27326542)
Hum Brain Mapp. 2019 Oct 1;40(14):4163-4179. (PMID: 31175816)
J Comput Assist Tomogr. 1998 Mar-Apr;22(2):324-33. (PMID: 9530404)
Med Image Anal. 2008 Dec;12(6):713-26. (PMID: 18640867)
World Neurosurg. 2017 Jul;103:531-537. (PMID: 28427973)
Neuroimage. 2018 Mar;168:141-151. (PMID: 28069539)
Hum Brain Mapp. 2009 Sep;30(9):2907-26. (PMID: 19172646)
Neuroimage. 2009 Jul 1;46(3):786-802. (PMID: 19195496)
Stereotact Funct Neurosurg. 2008;86(2):113-9. (PMID: 18270482)
Neuroimage. 2017 Apr 15;150:395-404. (PMID: 28163141)
Nat Methods. 2011 Jun 26;8(8):665-70. (PMID: 21706013)
معلومات مُعتمدة: International Compute Canada; International Brain Canada; International Canada First Research Excellence Fund; International Health Research; Canada CIHR; International Western University
فهرسة مساهمة: Keywords: accuracy; atlas; brain; deep brain stimulation; education; neuroanatomy; nonlinear registration; pallidum; quality control; striatum; template; thalamus
تواريخ الأحداث: Date Created: 20190609 Date Completed: 20200413 Latest Revision: 20200613
رمز التحديث: 20221213
مُعرف محوري في PubMed: PMC6865720
DOI: 10.1002/hbm.24693
PMID: 31175816
قاعدة البيانات: MEDLINE