دورية أكاديمية

The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.

التفاصيل البيبلوغرافية
العنوان: The Bacillus anthracis class Ib ribonucleotide reductase subunit NrdF intrinsically selects manganese over iron.
المؤلفون: Grāve K; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16C, 10691, Stockholm, Sweden., Griese JJ; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16C, 10691, Stockholm, Sweden.; Department of Cell and Molecular Biology, Uppsala University, BMC, Box 596, 75124, Uppsala, Sweden., Berggren G; Department of Chemistry, Ångström Laboratory, Uppsala University, Lägerhyddsvägen 1, 75120, Uppsala, Sweden., Bennett MD; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16C, 10691, Stockholm, Sweden., Högbom M; Department of Biochemistry and Biophysics, Stockholm University, Svante Arrhenius väg 16C, 10691, Stockholm, Sweden. hogbom@dbb.su.se.
المصدر: Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry [J Biol Inorg Chem] 2020 Jun; Vol. 25 (4), pp. 571-582. Date of Electronic Publication: 2020 Apr 15.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Springer Country of Publication: Germany NLM ID: 9616326 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-1327 (Electronic) Linking ISSN: 09498257 NLM ISO Abbreviation: J Biol Inorg Chem Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Berlin : Springer, c1996-
مواضيع طبية MeSH: Bacillus anthracis/*enzymology , Bacterial Proteins/*metabolism , Iron/*metabolism , Manganese/*metabolism , Ribonucleotide Reductases/*metabolism, Bacterial Proteins/chemistry ; Bacterial Proteins/genetics ; Crystallography, X-Ray ; Iron/chemistry ; Manganese/chemistry ; Models, Molecular ; Protein Conformation ; Ribonucleotide Reductases/chemistry ; Ribonucleotide Reductases/genetics
مستخلص: Correct protein metallation in the complex mixture of the cell is a prerequisite for metalloprotein function. While some metals, such as Cu, are commonly chaperoned, specificity towards metals earlier in the Irving-Williams series is achieved through other means, the determinants of which are poorly understood. The dimetal carboxylate family of proteins provides an intriguing example, as different proteins, while sharing a common fold and the same 4-carboxylate 2-histidine coordination sphere, are known to require either a Fe/Fe, Mn/Fe or Mn/Mn cofactor for function. We previously showed that the R2lox proteins from this family spontaneously assemble the heterodinuclear Mn/Fe cofactor. Here we show that the class Ib ribonucleotide reductase R2 protein from Bacillus anthracis spontaneously assembles a Mn/Mn cofactor in vitro, under both aerobic and anoxic conditions, when the metal-free protein is subjected to incubation with Mn II and Fe II in equal concentrations. This observation provides an example of a protein scaffold intrinsically predisposed to defy the Irving-Williams series and supports the assumption that the Mn/Mn cofactor is the biologically relevant cofactor in vivo. Substitution of a second coordination sphere residue changes the spontaneous metallation of the protein to predominantly form a heterodinuclear Mn/Fe cofactor under aerobic conditions and a Mn/Mn metal center under anoxic conditions. Together, the results describe the intrinsic metal specificity of class Ib RNR and provide insight into control mechanisms for protein metallation.
References: J Biol Inorg Chem. 2019 Sep;24(6):849-861. (PMID: 31410573)
J Biol Chem. 1972 Jun 10;247(11):3485-8. (PMID: 4337857)
Proc Natl Acad Sci U S A. 2013 Oct 22;110(43):17189-94. (PMID: 24101498)
Elife. 2018 Feb 01;7:. (PMID: 29388911)
Nat Chem Biol. 2019 Mar;15(3):241-249. (PMID: 30692683)
J Am Chem Soc. 2013 Mar 13;135(10):4027-39. (PMID: 23402532)
Proc Natl Acad Sci U S A. 2018 Oct 2;115(40):10022-10027. (PMID: 30224458)
Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):352-67. (PMID: 22505256)
Acta Crystallogr D Biol Crystallogr. 2013 Jul;69(Pt 7):1204-14. (PMID: 23793146)
Biochemistry. 2017 Jul 5;56(26):3369-3379. (PMID: 28574263)
Front Cell Infect Microbiol. 2014 Apr 28;4:52. (PMID: 24809024)
J Am Chem Soc. 2010 Aug 18;132(32):11197-213. (PMID: 20698687)
Protein Sci. 2018 Jan;27(1):293-315. (PMID: 29067766)
FEBS Lett. 2007 Jul 24;581(18):3351-5. (PMID: 17601579)
J Am Chem Soc. 2020 Mar 18;142(11):5338-5354. (PMID: 32062969)
J Am Chem Soc. 2014 Sep 24;136(38):13399-409. (PMID: 25153930)
Acta Crystallogr D Biol Crystallogr. 1996 Jul 1;52(Pt 4):826-8. (PMID: 15299647)
Acta Crystallogr D Struct Biol. 2019 Aug 1;75(Pt 8):764-771. (PMID: 31373575)
Science. 2010 Sep 17;329(5998):1526-30. (PMID: 20688982)
Science. 2004 Jul 9;305(5681):245-8. (PMID: 15247479)
J Biol Inorg Chem. 2011 Apr;16(4):553-65. (PMID: 21258828)
J Biol Inorg Chem. 2019 Sep;24(6):863-877. (PMID: 31414238)
Mol Microbiol. 2011 Apr;80(2):319-34. (PMID: 21338418)
Biochemistry. 2011 Jun 28;50(25):5615-23. (PMID: 21561096)
J Biol Chem. 2015 Oct 16;290(42):25254-72. (PMID: 26324712)
Biochemistry. 2018 May 8;57(18):2679-2693. (PMID: 29609464)
Trends Biochem Sci. 1998 Nov;23(11):438-43. (PMID: 9852763)
J Biol Chem. 1973 Nov 10;248(21):7464-72. (PMID: 4355582)
Biochemistry. 2011 Mar 15;50(10):1672-81. (PMID: 21250660)
J Biol Inorg Chem. 2010 Mar;15(3):339-49. (PMID: 20225400)
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. (PMID: 20383002)
Proc Natl Acad Sci U S A. 2009 Apr 7;106(14):5633-8. (PMID: 19321420)
Biochemistry. 2010 Feb 16;49(6):1297-309. (PMID: 20070127)
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):213-21. (PMID: 20124702)
Annu Rev Biochem. 2006;75:681-706. (PMID: 16756507)
J Am Chem Soc. 2017 Feb 8;139(5):1950-1957. (PMID: 28075562)
Biochemistry. 2013 Sep 17;52(37):6424-36. (PMID: 23924396)
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32. (PMID: 20124692)
Crit Rev Biochem Mol Biol. 2012 Jan-Feb;47(1):50-63. (PMID: 22050358)
Nature. 2018 Nov;563(7731):416-420. (PMID: 30429545)
Science. 2007 May 25;316(5828):1188-91. (PMID: 17525338)
J Biol Chem. 2019 Nov 29;294(48):18372-18386. (PMID: 31591267)
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. (PMID: 19461840)
Biochemistry. 2007 Jul 31;46(30):8709-16. (PMID: 17616152)
J Inorg Biochem. 2016 Sep;162:164-177. (PMID: 27138102)
Acta Crystallogr D Struct Biol. 2018 Feb 1;74(Pt 2):85-97. (PMID: 29533234)
Metallomics. 2012 Oct;4(10):1020-36. (PMID: 22991063)
Proc Natl Acad Sci U S A. 2005 Dec 13;102(50):17946-51. (PMID: 16322104)
فهرسة مساهمة: Keywords: Ferritin superfamily; Metal selectivity; Metalloprotein; Quantitative X-ray anomalous dispersion
المشرفين على المادة: 0 (Bacterial Proteins)
42Z2K6ZL8P (Manganese)
E1UOL152H7 (Iron)
EC 1.17.4.- (NrdF protein, bacteria)
EC 1.17.4.- (Ribonucleotide Reductases)
تواريخ الأحداث: Date Created: 20200417 Date Completed: 20210520 Latest Revision: 20210520
رمز التحديث: 20240829
مُعرف محوري في PubMed: PMC7239806
DOI: 10.1007/s00775-020-01782-3
PMID: 32296998
قاعدة البيانات: MEDLINE
الوصف
تدمد:1432-1327
DOI:10.1007/s00775-020-01782-3