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DNA Barcoding Silver Butter Catfish (Schilbe intermedius) Reveals Patterns of Mitochondrial Genetic Diversity Across African River Systems.

التفاصيل البيبلوغرافية
العنوان: DNA Barcoding Silver Butter Catfish (Schilbe intermedius) Reveals Patterns of Mitochondrial Genetic Diversity Across African River Systems.
المؤلفون: Nneji LM; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China. lotannanneji@gmail.com.; Sino-Africa Joint Research Centre, Chinese Academy of Sciences, Kunming, China. lotannanneji@gmail.com., Adeola AC; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China. chadeola@mail.kiz.ac.cn.; Sino-Africa Joint Research Centre, Chinese Academy of Sciences, Kunming, China. chadeola@mail.kiz.ac.cn., Mustapha MK; Department of Zoology, Faculty of Life Sciences, University of Ilorin, Ilorin, Kwara State, Nigeria., Oladipo SO; Department of Biosciences and Biotechnology, College of Pure and Applied Sciences, Kwara State University, Malete, Kwara State, Nigeria., Djagoun CAMS; Laboratory of Applied Ecology, Faculty of Agronomic Sciences, University of Abomey-Calavi, Abomey-Calavi, Benin., Nneji IC; Department of Biological Science, Faculty of Sciences, University of Abuja, Abuja, Nigeria., Adedeji BE; Department of Zoology, Faculty of Science, University of Ibadan, Ibadan, Oyo State, Nigeria., Olatunde O; Department of Zoology, Faculty of Science, University of Ibadan, Ibadan, Oyo State, Nigeria., Ayoola AO; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China., Okeyoyin AO; National Park Service Headquarter, Federal Capital Territory, Abuja, Nigeria., Ikhimiukor OO; Department of Microbiology, Faculty of Science, University of Ibadan, Ibadan, Oyo State, Nigeria., Useni GF; Taraba State Polytechnic, Suntai, Taraba State, Nigeria., Iyiola OA; Department of Zoology, Faculty of Life Sciences, University of Ilorin, Ilorin, Kwara State, Nigeria., Faturoti EO; Department of Aquaculture and Fisheries Management, Faculty of Agriculture, University of Ibadan, Ibadan, Oyo State, Nigeria., Matouke MM; Department of Zoology, Faculty of Science, University of Douala, Douala, Cameroon., Ndifor WK; Department of Zoology, Faculty of Science, University of Dschang, Dschang, Cameroon., Wang YY; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China., Chen J; Wild Forensic Center, Kunming, China., Wang WZ; State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences, Kunming, 650223, China.; Wild Forensic Center, Kunming, China., Kachi JB; Department of Biological Science, Faculty of Sciences, Federal University Lokoja, Lokoja, Nigeria., Ugwumba OA; Department of Zoology, Faculty of Science, University of Ibadan, Ibadan, Oyo State, Nigeria., Ugwumba AAA; Department of Zoology, Faculty of Science, University of Ibadan, Ibadan, Oyo State, Nigeria., Nwani CD; Department of Zoology and Environmental Biology, Faculty of Biological Sciences, University of Nigeria, Nsukka, Nigeria. chris.nwani@unn.edu.ng.
المصدر: Scientific reports [Sci Rep] 2020 Apr 27; Vol. 10 (1), pp. 7097. Date of Electronic Publication: 2020 Apr 27.
نوع المنشور: Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
أسماء مطبوعة: Original Publication: London : Nature Publishing Group, copyright 2011-
مواضيع طبية MeSH: DNA Barcoding, Taxonomic* , Genetic Variation* , Phylogeny*, Catfishes/*genetics , DNA, Mitochondrial/*genetics, Animals ; Kenya ; Nigeria ; Phylogeography ; Rivers
مستخلص: The silver butter catfish (Schilbe intermedius) is widely distributed across African river systems. To date, information on its mitochondrial genetic diversity, population structure, and historical demography are not well-established. Herein, we combined newly generated mitochondrial cytochrome c oxidase (COI) subunit I gene sequences with previously published COI sequences in the global databases to reconstruct its phylogeography, population genetic structure, and historical demography. Results from the mtDNA phylogeography and species delimitation tests (Cluster algorithm - Species Identifier, Automatic Barcode Gap Discovery and Poison Tree Process model) revealed that S. intermedius comprises at least seven geographically defined matrilines. Although the overall haplotype diversity of S. intermedius was high (h = 0.90), results showed that East (Kenya) and West (Nigeria) African populations had low levels of haplotype diversity (h = ~0.40). In addition, population genetic polymorphism and historical demographics showed that S. intermedius populations in both East and West Africa underwent severe contractions as a result of biogeographic influences. The patterns of genetic diversity and population structure were consistent with adaptive responses to historical biogeographic factors and contemporary environmental variations across African river systems. This is suggestive of the influence of historical biogeographic factors and climatic conditions on population divergence of S. intermedius across African river systems. Given our discovery of previously underappreciated diversity within S. intermedius, we recommend that this species be considered for increased conservation and management.
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المشرفين على المادة: 0 (DNA, Mitochondrial)
تواريخ الأحداث: Date Created: 20200429 Date Completed: 20201125 Latest Revision: 20240728
رمز التحديث: 20240728
مُعرف محوري في PubMed: PMC7184614
DOI: 10.1038/s41598-020-63837-4
PMID: 32341417
قاعدة البيانات: MEDLINE
الوصف
تدمد:2045-2322
DOI:10.1038/s41598-020-63837-4