دورية أكاديمية

Identification of three novel mutations in PCNT in vietnamese patients with microcephalic osteodysplastic primordial dwarfism type II.

التفاصيل البيبلوغرافية
العنوان: Identification of three novel mutations in PCNT in vietnamese patients with microcephalic osteodysplastic primordial dwarfism type II.
المؤلفون: Nguyen TH; Institute of Genome Research, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam.; Graduate University of Sciences and Technology, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam., Nguyen NL; Institute of Genome Research, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam., Vu CD; Department of Medical Genetics, Metabolism and Endocrinology, Vietnam National Children's Hospital, 18/879 La Thanh, Dong Da, Hanoi, 100000, Vietnam., Ngoc CTB; Institute of Genome Research, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam., Nguyen NK; Department of Medical Genetics, Metabolism and Endocrinology, Vietnam National Children's Hospital, 18/879 La Thanh, Dong Da, Hanoi, 100000, Vietnam., Nguyen HH; Institute of Genome Research, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam. nhhoang@igr.ac.vn.; Graduate University of Sciences and Technology, Vietnam Academy of Science and Technology (VAST), 18 Hoang Quoc Viet, Cau Giay, Hanoi, 100000, Vietnam. nhhoang@igr.ac.vn.
المصدر: Genes & genomics [Genes Genomics] 2021 Feb; Vol. 43 (2), pp. 115-121. Date of Electronic Publication: 2021 Jan 18.
نوع المنشور: Case Reports; Journal Article; Research Support, Non-U.S. Gov't
اللغة: English
بيانات الدورية: Publisher: The Korean Society of Genetics Country of Publication: Korea (South) NLM ID: 101481027 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2092-9293 (Electronic) Linking ISSN: 19769571 NLM ISO Abbreviation: Genes Genomics Subsets: MEDLINE
أسماء مطبوعة: Original Publication: Seoul : The Korean Society of Genetics, 2008-
مواضيع طبية MeSH: Antigens/*genetics , Dwarfism/*genetics , Fetal Growth Retardation/*genetics , Microcephaly/*genetics , Osteochondrodysplasias/*genetics, Child ; Child, Preschool ; Dwarfism/pathology ; Fetal Growth Retardation/pathology ; Humans ; Male ; Microcephaly/pathology ; Mutation ; Osteochondrodysplasias/pathology ; Phenotype
مستخلص: Background: Primordial dwarfism (PD) is a group of genetically heterogeneous disorders related to developmental disabilities occurring in the uterus and prolongs during all stages of life, resulting in short stature, facial deformities and abnormal brain.
Objective: To determine the exact cause of the disease in two Vietnamese patients priory diagnosed with PD by severe pre-and postnatal growth retardation with marked microcephaly and some bone abnormalities.
Methods: Whole-exome sequencing was performed for the two patients and mutations in genes related to PD were screened. Sanger sequencing was applied to examine the mutations in the patients of their families.
Results: Three novel mutations in the PCNT gene which have not been reported previously were identified in the two patients. Of which, two frameshift mutations (p.Thr479Profs*6 and p.Glu2742Alafs*8) were detected in patient I and one stop-gained mutation (p.Gln1907*) was detected in the patient II. These mutations may result in a truncated PCNT protein, leading to an inactivated PACT domain corresponding to residue His3138-Trp3216 of PCNT protein. Therefore, the three mutations may cause a deficiency of protein functional activity and result in the phenotypes of primordial dwarfism in the two patients.
Conclusions: Clinical presentations in combination with genetic analyses supported an accurate diagnosis of the two patients with microcephalic osteodysplastic primordial dwarfism type II (MOPD II). In addition, these results have important implications for prenatal genetic screening and genetic counseling for the families.
References: Abdel-Salam GMH, Sayed ISM, Afifi HH, Abdel-Ghafar SF, Abouzaid MR, Ismail SI, Aglan MS, Issa MY, El-Bassyouni HT et al (2020) Microcephalic osteodysplastic primordial dwarfism type II: additional nine patients with implications on phenotype and genotype correlation. Am J Med Genet A 182(6):1407–1420. https://doi.org/10.1002/ajmg.a.61585. (PMID: 10.1002/ajmg.a.6158532267100)
Bober MB, Jackson AP (2017) Microcephalic osteodysplastic Primordial dwarfism, type II: a clinical review. Curr Osteoporos Rep 15(2):61–69. https://doi.org/10.1007/s11914-017-0348-1. (PMID: 10.1007/s11914-017-0348-1284094125561166)
Bober MB, Niiler T, Duker AL, Murray JE, Ketterer T, Harley ME, Alvi S, Flora C, Rustad C, Bongers EMHF et al (2012) Growth in individuals with Majewski osteodysplastic primordial dwarfism type II caused by pericentrin mutations. Am J Med Genet 158A(11):2719–2725. https://doi.org/10.1002/ajmg.a.35447. (PMID: 10.1002/ajmg.a.3544722821869)
Brancati F, Castori M, Mingarelli R, Dallapiccola B (2005) Majewski osteodysplastic primordial dwarfism type II (MOPD II) complicated by stroke: clinical report and review of cerebral vascular anomalies. Am J Med Genet A 139(3):212–215. https://doi.org/10.1002/ajmg.a.31009. (PMID: 10.1002/ajmg.a.3100916278902)
Chen H, Gos A, Morris MA, Antonarakis SE (1996) Localization of a human homolog of the mouse pericentrin gene (PCNT) to chromosome 21qter. Genomics 35(3):620–624. https://doi.org/10.1006/geno.1996.0411. (PMID: 10.1006/geno.1996.04118812505)
Dehghan Tezerjani M, Vahidi Mehrjardi MY, Hozhabri H, Rahmanian M (2020) A novel PCNT frame shift variant (c.7511delA) causing osteodysplastic Primordial dwarfism of majewski Type 2 (MOPD II). Front Pediatr. https://doi.org/10.3389/fped.2020.00340. (PMID: 10.3389/fped.2020.00340326710037330014)
Fukuzawa R, Sato S, Sullivan MJ, Nishimura G, Hasegawa T, Matsuo N (2002) Autopsy case of microcephalic osteodysplastic primordial “dwarfism” type II. Am J Med Genet 113(1):93–96. https://doi.org/10.1002/ajmg.10716. (PMID: 10.1002/ajmg.1071612400072)
Gillingham AK, Munro S (2000) The PACT domain, a conserved centrosomal targeting motif in the coiled-coil proteins AKAP450 and pericentrin. EMBO Rep 1(6):524–529. https://doi.org/10.1093/embo-reports/kvd105. (PMID: 10.1093/embo-reports/kvd105112634981083777)
Griffith E, Walker S, Martin C-A, Vagnarelli P, Stiff T, Vernay B, Al Sanna N, Saggar A, Hamel B, Earnshaw WC et al (2008) Mutations in pericentrin cause Seckel syndrome with defective ATR-dependent DNA damage signaling. Nat Genet 40(2):232–236. https://doi.org/10.1038/ng.2007.80. (PMID: 10.1038/ng.2007.8018157127)
Hall JG, Flora C, Scott CI, Pauli RM, Tanaka KI (2004) Majewski osteodysplastic primordial dwarfism type II (MOPD II): natural history and clinical findings. Am J Med Genet 130A(1):55–72. https://doi.org/10.1002/ajmg.a.30203. (PMID: 10.1002/ajmg.a.3020315368497)
Kantaputra P, Tanpaiboon P, Porntaveetus T, Ohazama A, Sharpe P, Rauch A, Hussadaloy A, Thiel CT (2011) The smallest teeth in the world are caused by mutations in the PCNT gene. Am J Med Genet A 155A(6):1398–1403. https://doi.org/10.1002/ajmg.a.33984. (PMID: 10.1002/ajmg.a.3398421567919)
Karatas AF, Bober MB, Rogers K, Duker AL, Ditro CP, Mackenzie WG (2014) Hip pathology in Majewski osteodysplastic primordial dwarfism type II. J Pediatr Orthop 34(6):585–590. https://doi.org/10.1097/BPO.0000000000000183. (PMID: 10.1097/BPO.000000000000018324705347)
Khetarpal P, Das S, Panigrahi I, Munshi A (2016) Primordial dwarfism: overview of clinical and genetic aspects. Mol Genet Genom 291(1):1–15. https://doi.org/10.1007/s00438-015-1110-y. (PMID: 10.1007/s00438-015-1110-y)
Kim S, Rhee K (2014) Importance of the CEP215-pericentrin interaction for centrosome maturation during mitosis. PLoS One 9(1):e87016. https://doi.org/10.1371/journal.pone.0087016. (PMID: 10.1371/journal.pone.0087016244663163899370)
Kozlowski K, Donovan T, Masel J, Wright RG (1993) Microcephalic, osteodysplastic, primordial dwarfism. Australas Radiol 37(1):111–114. https://doi.org/10.1111/j.1440-1673.1993.tb00029.x. (PMID: 10.1111/j.1440-1673.1993.tb00029.x8323498)
Li FF, Wang XD, Zhu MW, Lou ZH, Zhang Q, Zhu CY, Feng HL, Lin ZG, Liu SL (2015) Identification of two novel critical mutations in PCNT gene resulting in microcephalic osteodysplastic primordial dwarfism type II associated with multiple intracranial aneurysms. Metab Brain Dis 30(6):1387–1394. https://doi.org/10.1007/s11011-015-9712-y. (PMID: 10.1007/s11011-015-9712-y26231886)
Li H, Durbin R (2009) Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinf Oxf Engl 25(14):1754–1760. https://doi.org/10.1093/bioinformatics/btp324. (PMID: 10.1093/bioinformatics/btp324)
McKenna A, Hanna M, Banks E, Sivachenko A, Cibulskis K, Kernytsky A, Garimella K, Altshuler D, Gabriel S, Daly M et al (2010) The genome analysis toolkit: a map reduce framework for analyzing next-generation DNA sequencing data. Genome Res 20(9):1297–1303. https://doi.org/10.1101/gr.107524.110. (PMID: 10.1101/gr.107524.110206441992928508)
Pachajoa H, Ruiz-Botero F, Isaza C (2014) A new mutation of the PCNT gene in a Colombian patient with microcephalic osteodysplastic primordial dwarfism type II: a case report. J Med Case Rep 8:191. https://doi.org/10.1186/1752-1947-8-191. (PMID: 10.1186/1752-1947-8-191249282214086705)
Rauch A, Thiel CT, Schindler D, Wick U, Crow YJ, Ekici AB, van Essen AJ, Goecke TO, Al-Gazali L, Chrzanowska KH et al (2008) Mutations in the pericentrin (PCNT) gene cause primordial dwarfism. Science 319(5864):816–819. https://doi.org/10.1126/science.1151174. (PMID: 10.1126/science.115117418174396)
Richards S, Aziz N, Bale S, Bick D, Das S, Gastier-Foster J, Grody WW, Hegde M, Lyon E, Spector E et al (2015) Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med Off J Am Coll Med Genet 17(5):405–424. https://doi.org/10.1038/gim.2015.30. (PMID: 10.1038/gim.2015.30)
Shaheen R, Maddirevula S, Ewida N, Alsahli S, Abdel-Salam GMH, Zaki MS, Tala SA, Alhashem A, Softah A, Al-Owain M et al (2019) Genomic and phenotypic delineation of congenital microcephaly. Genet Med Off J Am Coll Med Genet 21(3):545–552. https://doi.org/10.1038/s41436-018-0140-3. (PMID: 10.1038/s41436-018-0140-3)
Unal S, Alanay Y, Cetin M, Boduroğlu K, Utine E, Cormier-Daire V, Huber C, Ozsurekci Y, Kılıç E, Simsek-Kiper P et al (2014) Striking hematological abnormalities in patients with Microcephalic osteodysplastic Primordial dwarfism type II (MOPD II): a potential role of pericentrin in hematopoiesis. Pediatr Blood Cancer. https://doi.org/10.1002/pbc.24783. (PMID: 10.1002/pbc.2478324307660)
Vakili R, Hashemian S (2019) Primordial dwarfism: a case series from North East of Iran and literature review. J Pediatr Rev 7(2):113–120. https://doi.org/10.32598/jpr.7.2.113. (PMID: 10.32598/jpr.7.2.113)
Waich S, Janecke AR, Parson W, Greber-Platzer S, Müller T, Huber LA, Valovka T, Vodopiutz J (2020) Novel PCNT variants in MOPD II with attenuated growth restriction and pachygyria. Clin Genet. https://doi.org/10.1111/cge.13797. (PMID: 10.1111/cge.13797325576217497047)
Weiss K, Ekhilevitch N, Cohen L, Bratman-Morag S, Bello R, Martinez AF, Hadid Y, Shlush LI, Kurolap A, Paperna T et al (2020) Identification of a novel PCNT founder pathogenic variant in the Israeli Druze population. Eur J Med Genet 63(2):103643. https://doi.org/10.1016/j.ejmg.2019.03.007. (PMID: 10.1016/j.ejmg.2019.03.00730922925)
Willems M, Geneviève D, Borck G, Baumann C, Baujat G, Bieth E, Edery P, Farra C, Gerard M, Héron D et al (2010) Molecular analysis of pericentrin gene (PCNT) in a series of 24 Seckel/microcephalic osteodysplastic primordial dwarfism type II (MOPD II) families. J Med Genet 47(12):797–802. https://doi.org/10.1136/jmg.2009.067298. (PMID: 10.1136/jmg.2009.06729819643772)
فهرسة مساهمة: Keywords: MOPD II; Microcephaly; PCNT gene; Primordial dwarfism
المشرفين على المادة: 0 (Antigens)
0 (pericentrin)
SCR Disease Name: Microcephalic Osteodysplastic Primordial Dwarfism, Type II
تواريخ الأحداث: Date Created: 20210118 Date Completed: 20211217 Latest Revision: 20211217
رمز التحديث: 20240829
DOI: 10.1007/s13258-020-01032-5
PMID: 33460028
قاعدة البيانات: MEDLINE
الوصف
تدمد:2092-9293
DOI:10.1007/s13258-020-01032-5