دورية أكاديمية
The complete mitochondrial genome data of the Common Rose butterfly, Pachliopta aristolochiae (Lepidoptera, Papilionoidea, Papilionidae) from Malaysia.
| العنوان: | The complete mitochondrial genome data of the Common Rose butterfly, Pachliopta aristolochiae (Lepidoptera, Papilionoidea, Papilionidae) from Malaysia. |
|---|---|
| المؤلفون: | Miga M; Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, Johor Bahru, Johor 81310, Malaysia., Jahari PNS; Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, Johor Bahru, Johor 81310, Malaysia., Vei Siang C; School of Computing, Faculty of Engineering, Universiti Teknologi Malaysia, Johor Bahru, Johor 81310, Malaysia., Kamarudin KR; Centre of Research for Sustainable Uses of Natural Resources (SUNR), Faculty of Applied Sciences and Technology, Universiti Tun Hussein Onn Malaysia, Pagoh Higher Education Hub, Muar, Johor 84600, Malaysia., Shamsir MS; Centre of Research for Sustainable Uses of Natural Resources (SUNR), Faculty of Applied Sciences and Technology, Universiti Tun Hussein Onn Malaysia, Pagoh Higher Education Hub, Muar, Johor 84600, Malaysia., Tokiman L; Johor National Parks Corporation, Kota Iskandar, Iskandar Puteri, Johor 79575, Malaysia., Parimannan S; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, Bedong, Kedah 08100, Malaysia.; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia., Rajandas H; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, Bedong, Kedah 08100, Malaysia.; Deakin Genomics Centre, School of Life and Environmental Sciences, Faculty of Science, Engineering and Built Environment, Deakin University, Waurn Ponds Campus, Victoria 3216, Australia., Mohamed F; School of Computing, Faculty of Engineering, Universiti Teknologi Malaysia, Johor Bahru, Johor 81310, Malaysia., Salleh FM; Department of Biosciences, Faculty of Science, Universiti Teknologi Malaysia, Johor Bahru, Johor 81310, Malaysia.; Centre of Excellence for Omics-Driven Computational Biodiscovery (COMBio), Faculty of Applied Sciences, AIMST University, Bedong, Kedah 08100, Malaysia. |
| المصدر: | Data in brief [Data Brief] 2021 Dec 23; Vol. 40, pp. 107740. Date of Electronic Publication: 2021 Dec 23 (Print Publication: 2022). |
| نوع المنشور: | Journal Article |
| اللغة: | English |
| بيانات الدورية: | Publisher: Elsevier B.V Country of Publication: Netherlands NLM ID: 101654995 Publication Model: eCollection Cited Medium: Internet ISSN: 2352-3409 (Electronic) Linking ISSN: 23523409 NLM ISO Abbreviation: Data Brief Subsets: PubMed not MEDLINE |
| أسماء مطبوعة: | Original Publication: [Amsterdam] : Elsevier B.V., [2014]- |
| مستخلص: | Here, we present the complete mitochondrial genome of Pachliopta aristolochiae , a Common Rose butterfly from Malaysia. The sequence was generated using Illumina NovaSeq 6000 sequencing platform. The mitogenome is 15,235bp long, consisting of 13 protein-coding genes, 22 transfer RNAs, two ribosomal RNAs, and two D-loop regions. The total base composition was (81.6%), with A (39.3%), T (42.3%), C (11.0%) and G (7.3%). The gene order of the three tRNAs was trnM-trnI-trnQ , which differs from the ancestral insect gene order trnI-trnQ-trnM . Phylogenetic tree analysis revealed that the sequenced Pachliopta aristolochiae in this data is closely related to Losaria neptunus (NC 037868), with highly supported ML and BI analysis. The data presented in this work can provide useful resources for other researchers to study deeper into the phylogenetic relationships of Lepidoptera and the diversification of the Pachliopta species. Also, as one of the bioindicator species, this data can be used to assess environmental changes in the terrestrial and aquatic ecosystem via enviromental DNA approahes. The mitogenome of Pachliopta aristolochiae is available in GenBank under the accession number MZ781228. Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper. (© 2021 The Author(s). Published by Elsevier Inc.) |
| References: | Mol Biol Evol. 2017 Mar 1;34(3):772-773. (PMID: 28013191) Data Brief. 2020 May 21;31:105721. (PMID: 32490085) Nucleic Acids Res. 2013 Jul;41(Web Server issue):W575-81. (PMID: 23609545) Mitochondrial DNA B Resour. 2021 Feb 11;6(2):502-504. (PMID: 33628904) Mol Phylogenet Evol. 2013 Nov;69(2):313-9. (PMID: 22982435) Nat Protoc. 2014 May;9(5):1056-82. (PMID: 24722405) Nucleic Acids Res. 2017 Feb 28;45(4):e18. (PMID: 28204566) Syst Biol. 2012 May;61(3):539-42. (PMID: 22357727) Nucleic Acids Res. 2016 Jul 8;44(W1):W232-5. (PMID: 27084950) Bioinformatics. 2009 May 1;25(9):1189-91. (PMID: 19151095) Mitochondrial DNA B Resour. 2020 Jan 20;5(1):733-735. (PMID: 33366725) Genomics. 2019 Jul;111(4):759-761. (PMID: 29842948) BMC Res Notes. 2016 Feb 12;9:88. (PMID: 26868221) Syst Biol. 2018 Sep 1;67(5):901-904. (PMID: 29718447) Mol Ecol Resour. 2020 Jan;20(1):348-355. (PMID: 31599058) BMC Genomics. 2012 Jun 22;13:276. (PMID: 22726496) Genomics. 2020 Nov;112(6):4435-4441. (PMID: 32745503) Bioinformatics. 2010 Feb 1;26(3):401-2. (PMID: 19965881) |
| فهرسة مساهمة: | Keywords: Lepidoptera; Malaysia; Mitogenome; Pachliopta aristolochiae; Papilionidae |
| تواريخ الأحداث: | Date Created: 20220210 Latest Revision: 20220211 |
| رمز التحديث: | 20231215 |
| مُعرف محوري في PubMed: | PMC8813591 |
| DOI: | 10.1016/j.dib.2021.107740 |
| PMID: | 35141362 |
| قاعدة البيانات: | MEDLINE |
Full Text Finder | تدمد: | 2352-3409 |
|---|---|
| DOI: | 10.1016/j.dib.2021.107740 |