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Reference materials for MS-based untargeted metabolomics and lipidomics: a review by the metabolomics quality assurance and quality control consortium (mQACC).

التفاصيل البيبلوغرافية
العنوان: Reference materials for MS-based untargeted metabolomics and lipidomics: a review by the metabolomics quality assurance and quality control consortium (mQACC).
المؤلفون: Lippa KA; Chemical Sciences Division, National Institute of Standards and Technology (NIST), Gaithersburg, MD, 20899, USA., Aristizabal-Henao JJ; Department of Physiological Sciences, Center for Environmental and Human Toxicology, College of Veterinary Medicine, University of Florida, Gainesville, FL, 32610, USA.; BERG LLC, 500 Old Connecticut Path, Building B, 3rd Floor, Framingham, MA, 01710, USA., Beger RD; Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration (FDA), Jefferson, AR, 72079, USA., Bowden JA; Department of Physiological Sciences, Center for Environmental and Human Toxicology, College of Veterinary Medicine, University of Florida, Gainesville, FL, 32610, USA., Broeckling C; Analytical Resources Core: Bioanalysis and Omics Center, Colorado State University, Fort Collins, CO, 80523, USA., Beecher C; IROA Technologies, Chapel Hill, NC, 27517, USA., Clay Davis W; Chemical Sciences Division, National Institute of Standards and Technology (NIST), Charleston, SC, 29412, USA., Dunn WB; School of Biosciences, Institute of Metabolism and Systems Research and Phenome Centre Birmingham, University of Birmingham, Birmingham, B15, 2TT, UK., Flores R; Division of Program Coordination, Planning and Strategic Initiatives, Office of Nutrition Research, Office of the Director, National Institutes of Health (NIH), Bethesda, MD, 20892, USA., Goodacre R; Department of Biochemistry and Systems Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, BioSciences Building, Crown St., Liverpool, L69 7ZB, UK., Gouveia GJ; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, 30602, USA., Harms AC; Biomedical Metabolomics Facility Leiden, Leiden University, Einsteinweg 55, 2333 CC, Leiden, The Netherlands., Hartung T; Bloomberg School of Public Health, Environmental Health and Engineering, Johns Hopkins University, Baltimore, MD, 21205, USA., Jones CM; Chemical Sciences Division, National Institute of Standards and Technology (NIST), Gaithersburg, MD, 20899, USA., Lewis MR; National Phenome Centre, Imperial College London, London, SW7 2AZ, UK., Ntai I; Thermo Fisher Scientific, San Jose, CA, 95134, USA., Percy AJ; Cambridge Isotope Laboratories, Inc., Tewksbury, MA, 01876, USA., Raftery D; Northwest Metabolomics Research Center, University of Washington, Seattle, WA, 98109, USA., Schock TB; Chemical Sciences Division, National Institute of Standards and Technology (NIST), Charleston, SC, 29412, USA., Sun J; Division of Systems Biology, National Center for Toxicological Research, U.S. Food and Drug Administration (FDA), Jefferson, AR, 72079, USA., Theodoridis G; Department of Chemistry, Aristotle University, 54124, Thessaloniki, Greece., Tayyari F; Department of Internal Medicine, University of Iowa, Iowa City, IA, 52242, USA., Torta F; Centre for Life Sciences, National University of Singapore, 28 Medical Drive, Singapore, 117456, Singapore., Ulmer CZ; Centers for Disease Control and Prevention (CDC), Atlanta, GA, 30341, USA., Wilson I; Computational & Systems Medicine, Imperial College, Exhibition Rd, London, SW7 2AZ, UK., Ubhi BK; MOBILion Systems Inc., 4 Hillman Drive Suite 130, Chadds Ford, PA, 19317, USA. drbkubhi@gmail.com.
المصدر: Metabolomics : Official journal of the Metabolomic Society [Metabolomics] 2022 Apr 09; Vol. 18 (4), pp. 24. Date of Electronic Publication: 2022 Apr 09.
نوع المنشور: Journal Article; Review
اللغة: English
بيانات الدورية: Publisher: Springer Country of Publication: United States NLM ID: 101274889 Publication Model: Electronic Cited Medium: Internet ISSN: 1573-3890 (Electronic) Linking ISSN: 15733882 NLM ISO Abbreviation: Metabolomics Subsets: MEDLINE
أسماء مطبوعة: Original Publication: New York : Springer, c2006-
مواضيع طبية MeSH: Lipidomics* , Metabolomics*/methods, Mass Spectrometry/methods ; Quality Control ; Reproducibility of Results
مستخلص: Introduction: The metabolomics quality assurance and quality control consortium (mQACC) is enabling the identification, development, prioritization, and promotion of suitable reference materials (RMs) to be used in quality assurance (QA) and quality control (QC) for untargeted metabolomics research.
Objectives: This review aims to highlight current RMs, and methodologies used within untargeted metabolomics and lipidomics communities to ensure standardization of results obtained from data analysis, interpretation and cross-study, and cross-laboratory comparisons. The essence of the aims is also applicable to other 'omics areas that generate high dimensional data.
Results: The potential for game-changing biochemical discoveries through mass spectrometry-based (MS) untargeted metabolomics and lipidomics are predicated on the evolution of more confident qualitative (and eventually quantitative) results from research laboratories. RMs are thus critical QC tools to be able to assure standardization, comparability, repeatability and reproducibility for untargeted data analysis, interpretation, to compare data within and across studies and across multiple laboratories. Standard operating procedures (SOPs) that promote, describe and exemplify the use of RMs will also improve QC for the metabolomics and lipidomics communities.
Conclusions: The application of RMs described in this review may significantly improve data quality to support metabolomics and lipidomics research. The continued development and deployment of new RMs, together with interlaboratory studies and educational outreach and training, will further promote sound QA practices in the community.
(© 2022. This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply.)
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فهرسة مساهمة: Keywords: Certified reference materials; Internal standards; Lipidomics; Mass spectrometry; Metabolomics; Metabolomics quality assurance and quality control consortium (mQACC); Reference materials; Untargeted analysis
تواريخ الأحداث: Date Created: 20220409 Date Completed: 20220412 Latest Revision: 20220716
رمز التحديث: 20221213
مُعرف محوري في PubMed: PMC8994740
DOI: 10.1007/s11306-021-01848-6
PMID: 35397018
قاعدة البيانات: MEDLINE
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