دورية أكاديمية
A collaborative approach to improving representation in viral genomic surveillance.
العنوان: | A collaborative approach to improving representation in viral genomic surveillance. |
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المؤلفون: | Kim PY; Department of Biological Sciences, Grambling State University, Grambling, LA, United States of America., Kim AY; Department of Biological Sciences, Grambling State University, Grambling, LA, United States of America., Newman JJ; School of Biological Sciences, Louisiana Tech University, Ruston, LA, United States of America., Cella E; Burnett School of Biomedical Sciences, University of Central Florida, Orlando, FL, United States of America., Bishop TC; Physics and Chemistry Programs, Louisiana Tech University, Ruston, LA, United States of America., Huwe PJ; Mercer University School of Medicine, Macon, GA, United States of America., Uchakina ON; Mercer University School of Medicine, Macon, GA, United States of America., McKallip RJ; Mercer University School of Medicine, Macon, GA, United States of America., Mack VL; Mercer Medicine, Macon, GA, United States of America., Hill MP; Mercer Medicine, Macon, GA, United States of America., Ogungbe IV; Department of Chemistry, Jackson State University, Jackson, MS, United States of America., Adeyinka O; Department of Chemistry, Jackson State University, Jackson, MS, United States of America., Jones S; Health Services Center, Jackson State University, Jackson, MS, United States of America., Ware G; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America., Carroll J; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America., Sawyer JF; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America., Densmore KH; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America., Foster M; School of Biological Sciences, Louisiana Tech University, Ruston, LA, United States of America., Valmond L; Department of Biological Sciences, Grambling State University, Grambling, LA, United States of America., Thomas J; Department of Biological Sciences, Grambling State University, Grambling, LA, United States of America., Azarian T; Burnett School of Biomedical Sciences, University of Central Florida, Orlando, FL, United States of America., Queen K; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America., Kamil JP; Center of Excellence for Emerging Viral Threats, Louisiana State University Health Shreveport, Shreveport, LA, United States of America.; Department of Microbiology and Immunology, Louisiana State University Health Shreveport, Shreveport, LA, United States of America. |
المصدر: | PLOS global public health [PLOS Glob Public Health] 2023 Jul 19; Vol. 3 (7), pp. e0001935. Date of Electronic Publication: 2023 Jul 19 (Print Publication: 2023). |
نوع المنشور: | Journal Article |
اللغة: | English |
بيانات الدورية: | Publisher: Public Library of Science Country of Publication: United States NLM ID: 9918283779606676 Publication Model: eCollection Cited Medium: Internet ISSN: 2767-3375 (Electronic) Linking ISSN: 27673375 NLM ISO Abbreviation: PLOS Glob Public Health Subsets: PubMed not MEDLINE |
أسماء مطبوعة: | Original Publication: San Francisco, California : Public Library of Science, [2021]- |
مستخلص: | The lack of routine viral genomic surveillance delayed the initial detection of SARS-CoV-2, allowing the virus to spread unfettered at the outset of the U.S. epidemic. Over subsequent months, poor surveillance enabled variants to emerge unnoticed. Against this backdrop, long-standing social and racial inequities have contributed to a greater burden of cases and deaths among minority groups. To begin to address these problems, we developed a new variant surveillance model geared toward building 'next generation' genome sequencing capacity at universities in or near rural areas and engaging the participation of their local communities. The resulting genomic surveillance network has generated more than 1,000 SARS-CoV-2 genomes to date, including the first confirmed case in northeast Louisiana of Omicron, and the first and sixth confirmed cases in Georgia of the emergent BA.2.75 and BQ.1.1 variants, respectively. In agreement with other studies, significantly higher viral gene copy numbers were observed in Delta variant samples compared to those from Omicron BA.1 variant infections, and lower copy numbers were seen in asymptomatic infections relative to symptomatic ones. Collectively, the results and outcomes from our collaborative work demonstrate that establishing genomic surveillance capacity at smaller academic institutions in rural areas and fostering relationships between academic teams and local health clinics represent a robust pathway to improve pandemic readiness. Competing Interests: The authors have declared that no competing interests exist. (Copyright: © 2023 Kim et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.) |
التعليقات: | Update of: bioRxiv. 2022 Oct 20;:. (PMID: 36299431) |
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معلومات مُعتمدة: | P20 GM121307 United States GM NIGMS NIH HHS; P20 GM134974 United States GM NIGMS NIH HHS |
تواريخ الأحداث: | Date Created: 20230719 Latest Revision: 20231102 |
رمز التحديث: | 20231215 |
مُعرف محوري في PubMed: | PMC10355392 |
DOI: | 10.1371/journal.pgph.0001935 |
PMID: | 37467165 |
قاعدة البيانات: | MEDLINE |
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